Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR175690 Cardamine hirsuta HOM05D000125 ORTHO05D000120 7.0e-29 129.8 60 100.0
Aa31LG4G15740 Aethionema arabicum HOM05D000125 ORTHO05D000120 6.6e-19 96.7 60 68.3
CARHR110090 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.5e-18 95.5 58 74.1
BraA07t27875Z Brassica rapa HOM05D000125 ORTHO05D000120 1.9e-18 95.1 59 72.9
Aa31LG4G15770 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.2e-17 92.4 58 70.7
CARHR110710 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.2e-17 92.4 61 70.5
Aa31LG4G15750 Aethionema arabicum HOM05D000125 ORTHO05D000120 2.8e-17 91.3 59 67.8
AT2G19660 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.7e-17 90.5 60 71.7
CARHR110100 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.7e-17 90.5 60 65.0
Aa31LG4G16000 Aethionema arabicum HOM05D000125 ORTHO05D000120 8.1e-17 89.7 60 66.7
AL7G46380 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 7.5e-15 83.2 62 66.1
CARHR110110 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.3e-14 82.4 60 61.7
C04p68180 Brassica napus HOM05D000125 ORTHO05D000120 1.7e-14 82.0 60 61.7
Carub.0003s3395 Capsella rubella HOM05D000125 ORTHO05D000120 1.7e-14 82.0 61 67.2
A04p30780 Brassica napus HOM05D000125 ORTHO05D000120 2.2e-14 81.6 60 61.7
C07p02230 Brassica napus HOM05D000125 ORTHO05D000120 2.2e-14 81.6 62 61.3
Carub.0007s3277 Capsella rubella HOM05D000125 ORTHO05D000120 2.2e-14 81.6 62 62.9
AT5G37620 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.9e-14 81.3 61 63.9
BcaC06g36541 Brassica carinata HOM05D000125 ORTHO05D000120 2.9e-14 81.3 59 64.4
BraA04t18536Z Brassica rapa HOM05D000125 ORTHO05D000120 2.9e-14 81.3 60 61.7
BcaC04g22836 Brassica carinata HOM05D000125 ORTHO05D000120 6.4e-14 80.1 58 63.8
C09p14810 Brassica napus HOM05D000125 ORTHO05D000120 8.3e-14 79.7 58 63.8
BolC9t54381H Brassica oleracea HOM05D000125 ORTHO05D000120 8.3e-14 79.7 58 63.8
Thhalv10022573m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.9e-13 78.6 62 66.1
Thhalv10001923m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 5.4e-13 77.0 62 59.7
AT2G04680 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.1e-13 76.6 62 59.7
AT3G46810 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.2e-12 75.9 59 59.3
Carub.0007s3278 Capsella rubella HOM05D000125 ORTHO05D000120 2.1e-12 75.1 61 60.7
BcaB08g37098 Brassica carinata HOM05D000125 ORTHO05D000120 2.7e-12 74.7 63 61.9
AT2G19650 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.8e-12 73.2 56 60.7
A09p12500 Brassica napus HOM05D000125 ORTHO05D000120 7.8e-12 73.2 48 66.7
BraA09t36894Z Brassica rapa HOM05D000125 ORTHO05D000120 7.8e-12 73.2 48 66.7
AL5G25820 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.0e-11 72.8 54 63.0
AT3G46800 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.3e-11 71.6 59 55.9
Aa31LG3G15790 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.5e-10 68.9 60 53.3
Carub.0006s3498 Capsella rubella HOM05D000125 ORTHO05D000120 1.5e-10 68.9 61 44.3
Aa31LG3G5860 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.9e-10 68.6 60 53.3
BolC7t44181H Brassica oleracea HOM05D000125 ORTHO05D000120 9.5e-10 66.2 61 49.2
Thhalv10003760m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.6e-09 65.5 61 47.5
Carub.0006s3058 Capsella rubella HOM05D000125 ORTHO05D000120 6.2e-09 63.5 62 46.8
Thhalv10002432m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 6.2e-09 63.5 61 45.9
Thhalv10005296m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 6.2e-09 63.5 62 50.0
Carub.0006s2010 Capsella rubella HOM05D000125 ORTHO05D000120 8.1e-09 63.2 61 47.5
Carub.0006s3031 Capsella rubella HOM05D000125 ORTHO05D000120 1.1e-08 62.8 62 48.4
Thhalv10003740m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 1.4e-08 62.4 62 48.4
AT3G48400 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.8e-08 62.0 64 48.4
Carub.0006s3056 Capsella rubella HOM05D000125 ORTHO05D000120 1.8e-08 62.0 62 46.8
AT3G43890 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.3e-08 61.6 61 52.5
AT3G45840 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.3e-08 61.6 61 44.3
Thhalv10028254m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 2.3e-08 61.6 59 45.8
AL8G18170 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 3.1e-08 61.2 59 50.8
CARHR148860 Cardamine hirsuta HOM05D000125 ORTHO05D000120 3.1e-08 61.2 61 49.2
AT1G69150 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.0e-08 60.8 61 52.5
AT5G22355 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.0e-08 60.8 62 45.2
CARHR148880 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.0e-08 60.8 61 47.5
Thhalv10003743m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 4.0e-08 60.8 62 46.8
Thhalv10003754m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 4.0e-08 60.8 62 46.8
AT4G01920 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 5.2e-08 60.5 62 43.5
CARHR045110 Cardamine hirsuta HOM05D000125 ORTHO05D000120 5.2e-08 60.5 63 49.2
AT1G58037 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.8e-08 60.1 60 53.3
Thhalv10003761m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 6.8e-08 60.1 62 46.8
AL6G42990 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 8.9e-08 59.7 62 45.2
THA.LOC104813860 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 8.9e-08 59.7 60 46.7
A07p20310 Brassica napus HOM05D000125 ORTHO05D000120 1.2e-07 59.3 64 45.3
BraA07t29732Z Brassica rapa HOM05D000125 ORTHO05D000120 1.2e-07 59.3 64 45.3
AT4G01930 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.5e-07 58.9 62 43.5
BcaC08g45817 Brassica carinata HOM05D000125 ORTHO05D000120 1.5e-07 58.9 61 47.5
BolC1t00933H Brassica oleracea HOM05D000125 ORTHO05D000120 1.5e-07 58.9 62 50.0
BolC6t38730H Brassica oleracea HOM05D000125 ORTHO05D000120 1.5e-07 58.9 61 47.5
Carub.0006s3032 Capsella rubella HOM05D000125 ORTHO05D000120 1.5e-07 58.9 62 45.2
Carub.0006s3499 Capsella rubella HOM05D000125 ORTHO05D000120 1.5e-07 58.9 62 43.5
CARHR191180 Cardamine hirsuta HOM05D000125 ORTHO05D000120 1.5e-07 58.9 68 47.1
THA.LOC104799077 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 2.0e-07 58.5 61 44.3
AL2G28240 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 2.6e-07 58.2 61 49.2
AT4G01910 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.4e-07 57.8 62 43.5
BcaB01g02070 Brassica carinata HOM05D000125 ORTHO05D000120 3.4e-07 57.8 62 45.2
A09p01650 Brassica napus HOM05D000125 ORTHO05D000120 4.4e-07 57.4 63 47.6
Carub.0002s1575 Capsella rubella HOM05D000125 ORTHO05D000120 4.4e-07 57.4 61 47.5
Carub.0008s0058 Capsella rubella HOM05D000125 ORTHO05D000120 4.4e-07 57.4 61 47.5
CARHR045050 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.4e-07 57.4 63 46.0
Thhalv10000813m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 4.4e-07 57.4 59 47.5
Thhalv10016311m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 4.4e-07 57.4 62 40.3
AL6G50960 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 5.8e-07 57.0 62 40.3
AT4G11540 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 5.8e-07 57.0 62 41.9
BcaC09g51754 Brassica carinata HOM05D000125 ORTHO05D000120 5.8e-07 57.0 60 46.7
C09p01750 Brassica napus HOM05D000125 ORTHO05D000120 5.8e-07 57.0 62 45.2
AT4G01740 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.6e-07 56.6 62 40.3
AT4G02190 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.6e-07 56.6 60 41.7
A09p19060 Brassica napus HOM05D000125 ORTHO05D000120 7.6e-07 56.6 63 49.2
C01p09470 Brassica napus HOM05D000125 ORTHO05D000120 7.6e-07 56.6 62 48.4
C01p09610 Brassica napus HOM05D000125 ORTHO05D000120 7.6e-07 56.6 62 48.4
BraA09t37524Z Brassica rapa HOM05D000125 ORTHO05D000120 7.6e-07 56.6 62 46.8
Carub.0005s1456 Capsella rubella HOM05D000125 ORTHO05D000120 7.6e-07 56.6 55 47.3
Thhalv10001211m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 7.6e-07 56.6 59 45.8
THA.LOC104805963 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 7.6e-07 56.6 64 46.9
THA.LOC104820136 Tarenaya hassleriana HOM05D000125 ORTHO05D000120 7.6e-07 56.6 60 46.7
AL6G47610 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 9.9e-07 56.2 60 45.0
BcaC04g24046 Brassica carinata HOM05D000125 ORTHO05D000120 9.9e-07 56.2 63 46.0
C09p01720 Brassica napus HOM05D000125 ORTHO05D000120 9.9e-07 56.2 64 45.3
BolC9t53106H Brassica oleracea HOM05D000125 ORTHO05D000120 9.9e-07 56.2 64 45.3
Carub.0006s3030 Capsella rubella HOM05D000125 ORTHO05D000120 9.9e-07 56.2 58 44.8
Thhalv10029207m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 9.9e-07 56.2 60 46.7
AT1G65180 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.3e-06 55.8 61 49.2
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 1.3e-06 55.8 61 45.9
A09p01620 Brassica napus HOM05D000125 ORTHO05D000120 1.3e-06 55.8 62 41.9
C07p57230 Brassica napus HOM05D000125 ORTHO05D000120 1.3e-06 55.8 62 43.5
BolC7t46193H Brassica oleracea HOM05D000125 ORTHO05D000120 1.3e-06 55.8 62 43.5
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 1.3e-06 55.8 61 45.9
Carub.0006s3544 Capsella rubella HOM05D000125 ORTHO05D000120 1.3e-06 55.8 62 40.3
Aa31sc652G60 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.7e-06 55.5 64 40.6
Aa31sc652G70 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.7e-06 55.5 64 40.6
AL2G21130 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.7e-06 55.5 62 43.5
AT1G50190 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.7e-06 55.5 63 47.6
AT1G55420 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.7e-06 55.5 60 41.7
AT5G59940 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.7e-06 55.5 53 45.3
BcaB01g02021 Brassica carinata HOM05D000125 ORTHO05D000120 1.7e-06 55.5 62 45.2
Carub.0006s3059 Capsella rubella HOM05D000125 ORTHO05D000120 1.7e-06 55.5 62 41.9
Aa31LG9G1310 Aethionema arabicum HOM05D000125 ORTHO05D000120 2.2e-06 55.1 58 43.1
AT4G01760 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.2e-06 55.1 62 41.9
BcaC02g11458 Brassica carinata HOM05D000125 ORTHO05D000120 2.2e-06 55.1 61 39.3
C04p15320 Brassica napus HOM05D000125 ORTHO05D000120 2.2e-06 55.1 61 39.3
BolC4t23103H Brassica oleracea HOM05D000125 ORTHO05D000120 2.2e-06 55.1 61 39.3
AT5G42840 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.9e-06 54.7 58 46.6
A09p01630 Brassica napus HOM05D000125 ORTHO05D000120 2.9e-06 54.7 63 44.4
C04p15280 Brassica napus HOM05D000125 ORTHO05D000120 2.9e-06 54.7 58 37.9
BolC9t53109H Brassica oleracea HOM05D000125 ORTHO05D000120 2.9e-06 54.7 62 43.5
Carub.0005s0591 Capsella rubella HOM05D000125 ORTHO05D000120 2.9e-06 54.7 59 50.8
Carub.0007s2741 Capsella rubella HOM05D000125 ORTHO05D000120 2.9e-06 54.7 63 44.4
AT4G13130 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 3.7e-06 54.3 63 44.4
C01p09640 Brassica napus HOM05D000125 ORTHO05D000120 3.7e-06 54.3 62 48.4
BolC4t23105H Brassica oleracea HOM05D000125 ORTHO05D000120 3.7e-06 54.3 58 39.7
BolC9t53108H Brassica oleracea HOM05D000125 ORTHO05D000120 3.7e-06 54.3 62 43.5
BraA09t35820Z Brassica rapa HOM05D000125 ORTHO05D000120 3.7e-06 54.3 63 46.0
Aa31sc23G30 Aethionema arabicum HOM05D000125 ORTHO05D000120 4.9e-06 53.9 61 42.6
AT3G13760 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.9e-06 53.9 58 43.1
Carub.0001s0262 Capsella rubella HOM05D000125 ORTHO05D000120 4.9e-06 53.9 62 41.9
CARHR045070 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.9e-06 53.9 60 43.3
CARHR248840 Cardamine hirsuta HOM05D000125 ORTHO05D000120 4.9e-06 53.9 60 43.3
AL6G43330 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 6.4e-06 53.5 60 46.7
AT1G55380 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.4e-06 53.5 60 40.0
AT1G55430 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.4e-06 53.5 61 44.3
AT3G45530 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.4e-06 53.5 61 49.2
A03p59170 Brassica napus HOM05D000125 ORTHO05D000120 6.4e-06 53.5 62 45.2
A09p01670 Brassica napus HOM05D000125 ORTHO05D000120 6.4e-06 53.5 63 44.4
BraA03t14976Z Brassica rapa HOM05D000125 ORTHO05D000120 6.4e-06 53.5 62 45.2
BraA09t35821Z Brassica rapa HOM05D000125 ORTHO05D000120 6.4e-06 53.5 63 44.4
CARHR101760 Cardamine hirsuta HOM05D000125 ORTHO05D000120 6.4e-06 53.5 59 45.8
AT4G02180 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 8.4e-06 53.1 62 40.3
AT4G11550 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 8.4e-06 53.1 62 43.5
C09p02330 Brassica napus HOM05D000125 ORTHO05D000120 8.4e-06 53.1 57 45.6
BraA09t35822Z Brassica rapa HOM05D000125 ORTHO05D000120 8.4e-06 53.1 60 45.0
CARHR250400 Cardamine hirsuta HOM05D000125 ORTHO05D000120 8.4e-06 53.1 62 41.9


User provided reference genes

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