Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.1e-151 540.0 294 100.0
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 2.4e-130 469.2 307 84.4
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 8.5e-128 460.7 314 82.8
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 6.1e-126 454.5 303 83.2
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.4e-125 453.4 296 84.8
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 1.5e-124 449.9 296 84.1
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 9.7e-124 447.2 298 83.2
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 9.7e-124 447.2 298 83.2
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 9.7e-124 447.2 298 83.2
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 9.7e-124 447.2 309 80.9
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 4.5e-121 438.3 294 82.7
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 4.5e-121 438.3 294 82.7
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 3.8e-120 435.3 294 82.3
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 1.5e-119 433.3 303 79.5
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 2.8e-107 392.5 359 66.3
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 4.7e-102 375.2 296 74.3
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 5.7e-100 368.2 307 62.9
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 3.7e-99 365.5 307 65.1
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 3.2e-98 362.5 313 61.7
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 3.9e-96 355.5 307 64.2
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 5.0e-96 355.1 316 64.9
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 1.9e-95 353.2 325 59.7
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 2.5e-95 352.8 303 61.1
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 2.1e-94 349.7 311 58.8
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 3.6e-94 349.0 317 59.9
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 3.6e-94 349.0 317 59.9
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 5.8e-92 341.7 320 57.5
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 5.8e-92 341.7 317 59.0
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 3.7e-91 339.0 322 56.8
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 6.4e-91 338.2 315 61.0
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 8.3e-91 337.8 310 61.3
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 1.4e-90 337.0 319 56.4
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.9e-90 336.7 321 57.0
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 5.4e-90 335.1 328 56.1
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 7.0e-90 334.7 329 55.9
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 7.0e-90 334.7 328 54.3
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 7.0e-90 334.7 320 56.6
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 9.2e-90 334.3 322 56.8
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 9.2e-90 334.3 313 59.7
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.0e-89 333.2 299 62.5
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 4.6e-89 332.0 324 55.6
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 7.8e-89 331.3 319 54.9
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 7.8e-89 331.3 316 55.7
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 7.8e-89 331.3 325 55.1
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 1.7e-88 330.1 339 58.1
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 2.3e-88 329.7 319 56.1
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 3.0e-88 329.3 326 55.8
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 3.9e-88 328.9 316 55.7
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 5.0e-88 328.6 282 59.6
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 5.0e-88 328.6 311 55.9
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 6.6e-88 328.2 322 54.7
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 8.6e-88 327.8 301 56.5
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 8.6e-88 327.8 337 53.1
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 1.5e-87 327.0 307 56.4
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 1.5e-87 327.0 318 56.3
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 3.3e-87 325.9 315 56.8
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 7.3e-87 324.7 311 55.9
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 2.1e-86 323.2 302 60.3
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 1.1e-85 320.9 328 54.0
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 1.1e-85 320.9 318 57.2
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 1.1e-85 320.9 311 56.6
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 1.4e-85 320.5 318 54.7
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 3.1e-85 319.3 317 53.3
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 5.2e-85 318.5 325 56.6
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 6.8e-85 318.2 327 53.2
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 8.9e-85 317.8 341 51.0
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 3.4e-84 315.8 294 56.5
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 3.4e-84 315.8 328 53.0
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 7.5e-84 314.7 329 52.9
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 3.7e-83 312.4 322 56.2
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 6.4e-83 311.6 335 51.9
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 1.1e-82 310.8 326 52.1
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 1.9e-82 310.1 342 54.1
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 2.4e-82 309.7 324 50.6
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 4.1e-82 308.9 308 55.5
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 5.4e-82 308.5 291 59.1
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 7.1e-82 308.1 301 54.5
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 3.9e-80 302.4 337 51.3
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 4.3e-79 298.9 288 55.9
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 4.3e-79 298.9 288 55.9
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 5.6e-79 298.5 308 54.2
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 4.0e-77 292.4 330 49.7
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 2.6e-76 289.7 401 42.9
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 1.7e-75 287.0 262 56.5
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 1.9e-74 283.5 294 55.1
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 9.2e-74 281.2 265 57.4
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 4.6e-73 278.9 187 72.2
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 1.3e-72 277.3 292 51.0
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 1.1e-71 274.2 161 85.7
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 1.1e-71 274.2 324 49.1
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 1.6e-70 270.4 317 49.5
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 1.1e-69 267.7 195 65.6
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 2.4e-69 266.5 318 46.2
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 5.2e-69 265.4 306 50.0
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 9.9e-68 261.2 266 56.0
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 1.3e-67 260.8 198 64.1
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.7e-67 260.4 249 58.6
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 6.4e-67 258.5 188 66.5
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 6.4e-67 258.5 183 67.8
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 4.2e-66 255.8 259 52.1
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 3.9e-64 249.2 140 88.6
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 1.9e-63 246.9 338 43.5
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 2.7e-57 226.5 238 53.4
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 2.7e-57 226.5 190 56.8
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 3.0e-56 223.0 334 41.3
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 8.4e-51 204.9 213 56.3
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 4.2e-50 202.6 181 58.6
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 4.3e-47 192.6 303 38.3
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 9.6e-47 191.4 314 38.9
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 7.6e-44 181.8 151 75.5
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 6.7e-40 168.7 134 60.4
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 4.8e-38 162.5 413 32.0
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 4.6e-25 119.4 120 52.5
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 1.4e-21 107.8 166 41.6
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 2.4e-21 107.1 78 67.9
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 2.4e-21 107.1 344 26.7
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 7.2e-18 95.5 82 70.7
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 9.4e-18 95.1 125 42.4
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 3.6e-17 93.2 49 91.8
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 3.6e-17 93.2 144 41.7
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 1.4e-16 91.3 73 61.6
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 4.4e-15 86.3 72 63.9
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 9.7e-15 85.1 55 67.3
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 1.1e-13 81.6 146 36.3
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 4.1e-13 79.7 54 74.1
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.4e-08 64.7 80 43.8
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 2.3e-08 63.9 52 69.2
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 2.6e-07 60.5 59 50.8


User provided reference genes

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