Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.2e-151 538.9 266 100.0
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.9e-73 280.0 259 57.9
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 5.4e-73 278.5 239 60.7
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.2e-69 267.3 232 60.8
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 2.1e-69 266.5 242 59.5
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 3.4e-67 259.2 240 55.8
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 2.2e-66 256.5 233 59.2
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 8.4e-66 254.6 242 56.2
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 3.2e-65 252.7 241 56.0
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 7.1e-65 251.5 239 55.2
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 1.2e-64 250.8 246 54.1
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 2.7e-64 249.6 243 55.6
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 2.7e-64 249.6 243 55.1
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 4.6e-64 248.8 238 54.6
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 4.6e-64 248.8 246 54.1
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 1.3e-63 247.3 244 56.1
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 1.3e-63 247.3 244 54.5
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 1.3e-63 247.3 244 56.1
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.3e-63 246.5 225 58.2
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 3.3e-62 242.7 270 49.3
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 1.6e-61 240.4 236 56.4
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 1.8e-60 236.9 198 59.6
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 1.9e-57 226.9 250 49.6
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 7.1e-57 224.9 269 46.8
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 1.0e-55 221.1 249 50.2
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 1.0e-55 221.1 218 53.2
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 1.0e-55 221.1 249 50.2
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 3.0e-55 219.5 242 50.4
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 5.1e-55 218.8 249 49.4
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 5.1e-55 218.8 249 49.4
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 1.9e-54 216.9 250 48.8
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 5.6e-54 215.3 261 47.9
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 1.3e-53 214.2 251 48.2
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 1.6e-53 213.8 225 51.6
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 1.6e-53 213.8 222 49.5
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 2.1e-53 213.4 261 48.3
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 2.1e-53 213.4 247 48.6
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 4.8e-53 212.2 251 48.2
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-52 211.1 253 47.0
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 4.0e-52 209.1 215 50.7
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 5.3e-52 208.8 236 50.0
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 6.9e-52 208.4 238 47.5
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 1.7e-50 203.8 238 49.6
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 9.3e-49 198.0 208 52.4
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 2.1e-48 196.8 233 48.1
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 4.6e-48 195.7 205 51.2
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 1.0e-47 194.5 215 49.8
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 3.0e-47 193.0 213 50.2
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 5.1e-47 192.2 242 45.5
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 1.1e-46 191.0 211 48.8
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 1.1e-44 184.5 216 46.8
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 2.6e-43 179.9 216 45.8
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 2.9e-42 176.4 235 43.0
BcaC03g16910 Brassica carinata HOM05D008086 ORTHO05D004972 3.8e-42 176.0 202 50.0
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 6.5e-42 175.3 204 48.5
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 2.5e-41 173.3 189 50.3
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 3.0e-39 166.4 94 84.0
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 3.3e-30 136.3 197 42.1
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 3.2e-25 119.8 229 34.5
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 3.2e-25 119.8 238 33.2
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 7.2e-25 118.6 257 30.4
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 1.6e-24 117.5 250 31.2
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 4.7e-24 115.9 214 33.2
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 6.7e-23 112.1 240 29.6
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 6.7e-23 112.1 250 29.2
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.1e-22 111.3 249 30.5
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.0e-22 110.5 265 29.4
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 2.6e-22 110.2 250 28.8
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 2.6e-22 110.2 252 30.2
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 2.6e-22 110.2 250 28.8
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 5.7e-22 109.0 251 29.5
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 1.3e-21 107.8 225 31.6
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.2e-21 107.1 241 28.2
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 3.7e-21 106.3 242 28.9
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 4.8e-21 105.9 252 29.0
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 4.8e-21 105.9 252 29.0
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 6.3e-21 105.5 240 28.3
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 8.2e-21 105.1 239 28.5
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-20 104.4 91 59.3
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 5.3e-20 102.4 96 56.2
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 9.1e-20 101.7 217 30.0
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 9.1e-20 101.7 217 30.0
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 9.1e-20 101.7 223 30.5
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.5e-19 100.9 252 29.0
A02p30540 Brassica napus HOM05D008086 ORTHO05D004972 4.5e-19 99.4 148 43.2
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-18 98.2 228 30.3
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 2.2e-18 97.1 266 27.4
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 2.2e-18 97.1 247 28.7
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 5.0e-18 95.9 247 30.8
BraA02t08072Z Brassica rapa HOM05D008086 ORTHO05D004972 6.5e-18 95.5 143 43.4
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 6.5e-18 95.5 204 30.9
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.4e-17 94.4 267 26.6
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-17 94.4 247 30.4
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 1.9e-17 94.0 264 27.7
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 3.2e-17 93.2 216 28.7
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.5e-17 92.4 202 30.7
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 9.4e-17 91.7 215 30.2
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-16 91.3 231 29.9
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-16 90.9 231 28.6
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-16 90.9 261 26.8
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 2.7e-16 90.1 228 26.8
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.0e-15 88.2 205 27.3
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 1.4e-15 87.8 227 26.9
C07p32950 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-15 87.8 118 41.5
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 1.8e-15 87.4 228 26.8
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 1.8e-15 87.4 267 25.1
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 6.7e-15 85.5 189 30.2
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 6.7e-15 85.5 238 29.0
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 6.7e-15 85.5 238 29.0
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-14 84.7 222 24.3
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-14 84.7 222 24.3
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 5.7e-14 82.4 99 46.5
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-13 80.9 220 24.1
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 1.7e-13 80.9 220 24.1
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.7e-13 80.9 95 40.0
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 3.7e-13 79.7 94 44.7
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 3.7e-13 79.7 223 25.1
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 4.8e-13 79.3 101 35.6
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 4.8e-13 79.3 101 35.6
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 8.2e-13 78.6 96 39.6
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-12 78.2 222 23.4
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 1.8e-12 77.4 212 27.4
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.8e-12 77.4 273 24.2
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 2.4e-12 77.0 212 27.4
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 2.4e-12 77.0 260 24.6
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 3.1e-12 76.6 177 31.6
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 3.1e-12 76.6 223 23.8
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 4.1e-12 76.3 227 23.3
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 7.0e-12 75.5 244 24.2
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-11 74.7 242 25.2
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-11 74.3 216 27.8
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.6e-11 74.3 267 24.0
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 2.6e-11 73.6 205 25.4
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 2.6e-11 73.6 205 25.4
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 3.5e-11 73.2 232 25.4
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 5.9e-11 72.4 216 27.3
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.3e-10 71.2 259 23.2
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 2.9e-10 70.1 64 46.9
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 5.0e-10 69.3 189 30.2
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 5.0e-10 69.3 96 37.5
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 6.5e-10 68.9 232 26.3
C03p62430 Brassica napus HOM05D008086 ORTHO05D004972 8.5e-10 68.6 132 37.1
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.5e-09 67.0 97 37.1
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 1.0e-07 61.6 216 23.6
C02p48120 Brassica napus HOM05D008086 ORTHO05D041227 1.4e-07 61.2 72 44.4
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 1.4e-07 61.2 109 34.9
BolC2t10844H Brassica oleracea HOM05D008086 ORTHO05D041227 1.4e-07 61.2 72 44.4
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.4e-07 61.2 96 37.5
BolC3t18501H Brassica oleracea HOM05D008086 ORTHO05D004972 1.8e-07 60.8 73 45.2
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.3e-06 56.6 96 34.4
Nitab4.5_0007598g0030 Nicotiana tabacum HOM05D001099 ORTHO05D000958 7.5e-06 55.5 216 20.8


User provided reference genes

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