Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.1e-36 156.0 75 100.0
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.3e-32 142.5 75 89.3
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 8.5e-32 139.8 75 86.7
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.1e-31 139.4 75 86.7
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.9e-31 138.7 75 85.3
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 3.2e-31 137.9 75 86.7
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 5.5e-31 137.1 75 84.0
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 5.5e-31 137.1 75 84.0
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 9.4e-31 136.3 75 85.3
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.6e-30 134.4 74 81.1
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.6e-30 134.4 74 81.1
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.3e-28 127.9 70 82.9
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.3e-28 127.9 70 82.9
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 5.7e-28 127.1 70 82.9
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 5.7e-28 127.1 70 80.0
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 9.7e-28 126.3 72 77.8
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 6.3e-27 123.6 66 84.8
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 6.3e-27 123.6 71 77.5
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.1e-26 122.9 69 79.7
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.1e-26 122.9 71 74.6
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.1e-26 122.9 71 74.6
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 3.1e-26 121.3 71 73.2
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.1e-26 120.9 70 75.7
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 4.1e-26 120.9 72 75.0
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 5.3e-26 120.6 73 72.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 5.3e-26 120.6 69 76.8
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 5.3e-26 120.6 69 78.3
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 5.3e-26 120.6 69 78.3
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 7.0e-26 120.2 69 78.3
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 9.1e-26 119.8 69 76.8
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 9.1e-26 119.8 69 76.8
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 9.1e-26 119.8 69 76.8
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 9.1e-26 119.8 69 76.8
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.2e-25 119.4 70 74.3
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.2e-25 119.4 69 75.4
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 69 76.8
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.5e-25 119.0 70 75.7
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.0e-25 118.6 70 75.7
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.6e-25 118.2 69 72.5
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 2.6e-25 118.2 70 75.7
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 3.5e-25 117.9 66 83.3
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 4.5e-25 117.5 70 74.3
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 5.9e-25 117.1 70 75.7
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 5.9e-25 117.1 70 74.3
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 1.0e-24 116.3 70 72.9
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.3e-24 115.9 69 75.4
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.3e-24 115.9 70 72.9
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.3e-24 115.9 70 72.9
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.7e-24 115.5 70 70.0
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 2.2e-24 115.2 70 74.3
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 2.2e-24 115.2 71 71.8
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.9e-24 114.8 69 73.9
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 5.0e-24 114.0 69 73.9
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 5.0e-24 114.0 69 73.9
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 5.0e-24 114.0 73 68.5
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 6.5e-24 113.6 71 70.4
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 6.5e-24 113.6 69 72.5
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 8.5e-24 113.2 69 69.6
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 8.5e-24 113.2 73 67.1
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.1e-23 112.8 69 71.0
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.1e-23 112.8 69 71.0
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.1e-23 112.8 70 72.9
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.4e-23 112.5 70 70.0
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.5e-23 111.7 70 70.0
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.5e-23 111.7 70 70.0
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 3.2e-23 111.3 70 68.6
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 4.2e-23 110.9 68 75.0
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 4.2e-23 110.9 73 67.1
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 7.2e-23 110.2 73 71.2
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.6e-22 109.0 66 72.7
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 8.0e-22 106.7 72 68.1
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.0e-21 106.3 66 69.7
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.8e-21 105.5 81 60.5
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 3.0e-21 104.8 70 70.0
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 6.7e-21 103.6 82 61.0
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.1e-20 102.8 65 70.8
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.0e-20 102.1 64 70.3
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 9.7e-20 99.8 69 71.0
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.3e-19 99.4 72 61.1
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 6.3e-19 97.1 70 61.4
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 6.3e-19 97.1 66 65.2
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 8.2e-19 96.7 93 54.8
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.1e-18 96.3 80 58.8
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 2.4e-18 95.1 72 58.3
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 2.4e-18 95.1 66 63.6
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.2e-17 92.8 52 80.8
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 5.9e-17 90.5 49 81.6
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.3e-16 89.4 70 60.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 2.2e-16 88.6 75 60.0
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 2.9e-16 88.2 63 58.7
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 3.8e-16 87.8 134 38.8
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 5.0e-16 87.4 72 58.3
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.1e-15 86.3 128 39.1
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 4.2e-15 84.3 50 74.0
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.8e-11 71.6 40 75.0
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.7e-11 71.2 39 79.5
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 4.8e-11 70.9 40 72.5
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.8e-10 68.9 35 82.9
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 3.1e-10 68.2 39 76.9
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 5.3e-10 67.4 164 29.3
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 7.0e-10 67.0 39 74.4
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 9.1e-10 66.6 43 65.1
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 4.5e-09 64.3 40 67.5
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 7.7e-09 63.5 57 56.1
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 1.3e-08 62.8 40 67.5
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 1.3e-08 62.8 37 70.3
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 2.2e-08 62.0 37 67.6
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.2e-08 62.0 39 66.7
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 2.5e-07 58.5 31 77.4
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 4.2e-07 57.8 35 71.4
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 4.2e-07 57.8 39 61.5
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 9.4e-07 56.6 38 63.2
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.2e-06 56.2 56 48.2
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 8.0e-06 53.5 32 71.9


User provided reference genes

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