Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR171000 Cardamine hirsuta HOM05D006574 ORTHO05D008210 1.4e-179 632.9 325 100.0
Carub.0005s2733 Capsella rubella HOM05D006574 ORTHO05D008210 8.4e-153 543.9 335 85.1
AT3G60590 Arabidopsis thaliana HOM05D006574 ORTHO05D008210 4.2e-152 541.6 334 86.2
Thhalv10006432m.g Eutrema salsugineum HOM05D006574 ORTHO05D008210 1.0e-145 520.4 332 82.5
Sp5g02640 Schrenkiella parvula HOM05D006574 ORTHO05D008210 3.3e-141 505.4 330 80.3
BcaC02g10162 Brassica carinata HOM05D006574 ORTHO05D008210 1.4e-136 490.0 323 80.5
C04p32070 Brassica napus HOM05D006574 ORTHO05D008210 1.4e-136 490.0 323 80.5
BolC4t24760H Brassica oleracea HOM05D006574 ORTHO05D008210 1.4e-136 490.0 323 80.5
BraA04t15877Z Brassica rapa HOM05D006574 ORTHO05D008210 2.5e-136 489.2 322 80.4
A04p01560 Brassica napus HOM05D006574 ORTHO05D008210 5.5e-136 488.0 323 80.5
BcaB02g08163 Brassica carinata HOM05D006574 ORTHO05D008210 1.6e-135 486.5 328 79.0
C08p35540 Brassica napus HOM05D006574 ORTHO05D008210 5.7e-133 478.0 325 77.5
BraA09t40713Z Brassica rapa HOM05D006574 ORTHO05D008210 2.8e-132 475.7 327 77.7
BolC8t51146H Brassica oleracea HOM05D006574 ORTHO05D008210 3.1e-131 472.2 325 76.9
Aa31LG10G14870 Aethionema arabicum HOM05D006574 ORTHO05D008210 7.7e-130 467.6 317 77.0
A09p52810 Brassica napus HOM05D006574 ORTHO05D008210 5.0e-129 464.9 327 76.1
THA.LOC104817218 Tarenaya hassleriana HOM05D006574 ORTHO05D008210 1.0e-121 440.7 333 71.2
Sabra14G0044800 Salix brachista HOM05D006574 ORTHO05D008210 8.0e-103 377.9 329 61.1
Cpa.g.sc129.21 Carica papaya HOM05D006574 ORTHO05D008210 3.0e-102 375.9 339 59.6
Potri.014G061000 Populus trichocarpa HOM05D006574 ORTHO05D008210 2.9e-100 369.4 330 58.8
Dinv43672 Davidia involucrata HOM05D006574 ORTHO05D008210 1.2e-98 364.0 333 56.2
Prupe.2G138000 Prunus persica HOM05D006574 ORTHO05D008210 1.2e-98 364.0 309 59.9
Thecc.01G382800 Theobroma cacao HOM05D006574 ORTHO05D008210 3.5e-98 362.5 336 57.7
QL04p038697 Quercus lobata HOM05D006574 ORTHO05D008210 4.6e-98 362.1 334 57.2
MD07G1115500 Malus domestica HOM05D006574 ORTHO05D008210 2.3e-97 359.8 313 57.5
Cfa011166 Carpinus fangiana HOM05D006574 ORTHO05D008210 1.1e-96 357.5 317 59.0
Manes.05G049100 Manihot esculenta HOM05D006574 ORTHO05D008210 1.5e-96 357.1 300 60.3
Ciclev10021078m.g Citrus clementina HOM05D006574 ORTHO05D008210 1.9e-96 356.7 320 57.5
RcHm_v2.0_Chr1g0349101 Rosa chinensis HOM05D006574 ORTHO05D008210 1.9e-96 356.7 330 57.3
FAN03G3328 Fragaria x ananassa HOM05D006574 ORTHO05D008210 2.5e-96 356.3 334 56.6
arahy.Tifrunner.gnm1.ann1.KNQ922 Arachis hypogaea HOM05D006574 ORTHO05D008210 3.3e-96 355.9 339 56.0
FAN01G0938 Fragaria x ananassa HOM05D006574 ORTHO05D008210 3.3e-96 355.9 334 56.3
TPR.G4993 Trifolium pratense HOM05D006574 ORTHO05D008210 3.3e-96 355.9 298 61.1
CiPaw.13G032400 Carya illinoinensis HOM05D006574 ORTHO05D008210 5.6e-96 355.1 300 61.3
Lj3g0024356 Lotus japonicus HOM05D006574 ORTHO05D008210 5.6e-96 355.1 338 55.0
FAN10G1171 Fragaria x ananassa HOM05D006574 ORTHO05D008210 9.5e-96 354.4 334 55.7
Hma1.2p1_0386F.1_g141830 Hydrangea macrophylla HOM05D006574 ORTHO05D008210 1.6e-95 353.6 332 56.3
GSVIVG01027684001 Vitis vinifera HOM05D006574 ORTHO05D008210 1.6e-95 353.6 326 56.4
Ca_19840_v3 Cicer arietinum L. HOM05D006574 ORTHO05D008210 3.6e-95 352.4 285 60.4
FAN10G3734 Fragaria x ananassa HOM05D006574 ORTHO05D008210 8.0e-95 351.3 334 55.7
Medtr4g027070 Medicago truncatula HOM05D006574 ORTHO05D008210 8.0e-95 351.3 286 61.5
Lalb_Chr07g0190251 Lupinus albus HOM05D006574 ORTHO05D008210 1.0e-94 350.9 310 57.7
Glyma.03G032200 Glycine max HOM05D006574 ORTHO05D008210 1.4e-94 350.5 331 55.3
Duzib138G0195 Durio zibethinus HOM05D006574 ORTHO05D008210 1.8e-94 350.1 340 54.4
CANSAT56G0701 Cannabis sativa HOM05D006574 ORTHO05D008210 5.2e-94 348.6 330 56.4
CANSAT56G2026 Cannabis sativa HOM05D006574 ORTHO05D008210 6.8e-94 348.2 330 56.4
CSS0016139 Camellia sinensis var. sinensis HOM05D006574 ORTHO05D008210 2.0e-93 346.7 335 53.7
CSS0019673 Camellia sinensis var. sinensis HOM05D006574 ORTHO05D008210 2.0e-93 346.7 335 53.7
Glyma.01G135900 Glycine max HOM05D006574 ORTHO05D008210 2.6e-93 346.3 332 55.1
Lalb_Chr12g0207901 Lupinus albus HOM05D006574 ORTHO05D008210 2.6e-93 346.3 334 54.5
Gohir.A11G078700 Gossypium hirsutum HOM05D006574 ORTHO05D008210 5.8e-93 345.1 336 55.1
Gohir.D11G083300 Gossypium hirsutum HOM05D006574 ORTHO05D008210 7.5e-93 344.7 332 55.4
Gorai.007G088900 Gossypium raimondii HOM05D006574 ORTHO05D008210 3.7e-92 342.4 332 55.1
Psat7g236040 Pisum sativum HOM05D006574 ORTHO05D008210 6.4e-92 341.7 320 55.9
Sed0000081 Sechium edule HOM05D006574 ORTHO05D008210 2.4e-91 339.7 331 54.1
VMungo0331G0612 Vigna mungo HOM05D006574 ORTHO05D008210 4.1e-91 339.0 285 58.6
FAN06G3094 Fragaria x ananassa HOM05D006574 ORTHO05D008210 2.0e-90 336.7 348 52.3
FvH4_7g11080 Fragaria vesca HOM05D006574 ORTHO05D008210 3.5e-90 335.9 348 52.3
FAN06G2171 Fragaria x ananassa HOM05D006574 ORTHO05D008210 3.5e-90 335.9 348 52.0
COL.COLO4_12488 Corchorus olitorius HOM05D006574 ORTHO05D008210 4.6e-90 335.5 341 55.4
ClCG00G005790 Citrullus lanatus HOM05D006574 ORTHO05D008210 1.0e-89 334.3 331 55.9
TWI59G0788 Tripterygium wilfordii HOM05D006574 ORTHO05D008210 1.3e-89 334.0 323 55.7
TAR374G0842 Trochodendron aralioides HOM05D006574 ORTHO05D008210 6.6e-89 331.6 300 55.7
Aqoxy5G03888 Aquilegia oxysepala HOM05D006574 ORTHO05D008210 1.1e-88 330.9 327 54.7
AUR62004165 Chenopodium quinoa HOM05D006574 ORTHO05D008210 2.5e-88 329.7 278 59.0
CsaV3_5G004680 Cucumis sativus L. HOM05D006574 ORTHO05D008210 2.5e-88 329.7 327 55.0
Phvul.010G072300 Phaseolus vulgaris HOM05D006574 ORTHO05D008210 3.3e-88 329.3 335 51.9
EL10Ac1g00838 Beta vulgaris HOM05D006574 ORTHO05D008210 5.6e-88 328.6 337 51.6
CAN.G1872.8 Capsicum annuum HOM05D006574 ORTHO05D008210 9.5e-88 327.8 272 59.6
AUR62013662 Chenopodium quinoa HOM05D006574 ORTHO05D008210 1.2e-87 327.4 278 57.9
PGR004G2311 Punica granatum HOM05D006574 ORTHO05D008210 6.2e-87 325.1 285 57.9
MELO3C005473.2 Cucumis melo HOM05D006574 ORTHO05D008210 2.3e-86 323.2 327 53.8
PSO063G4205 Papaver somniferum HOM05D006574 ORTHO05D008210 2.3e-86 323.2 299 55.9
PSO782G0696 Papaver somniferum HOM05D006574 ORTHO05D008210 2.3e-86 323.2 305 54.8
Peaxi162Scf00803g00013 Petunia axillaris HOM05D006574 ORTHO05D008210 3.1e-86 322.8 275 57.5
PGSC0003DMG400026016 Solanum tuberosum HOM05D006574 ORTHO05D008210 3.1e-86 322.8 278 57.6
Nitab4.5_0000859g0210 Nicotiana tabacum HOM05D006574 ORTHO05D008210 4.0e-86 322.4 275 58.5
Sopen01g036640 Solanum pennellii HOM05D006574 ORTHO05D008210 5.2e-86 322.0 278 56.8
DCAR_015883 Daucus carota HOM05D006574 ORTHO05D008210 6.8e-86 321.6 280 57.9
Solyc01g090900.3 Solanum lycopersicum HOM05D006574 ORTHO05D008210 8.9e-86 321.2 285 56.1
Cc02_g24430 Coffea canephora HOM05D006574 ORTHO05D008210 1.2e-85 320.9 282 56.4
Nitab4.5_0008963g0020 Nicotiana tabacum HOM05D006574 ORTHO05D008210 2.0e-85 320.1 275 57.8
vmacro13444 Vaccinium macrocarpon HOM05D006574 ORTHO05D008210 2.0e-85 320.1 282 58.5
vmacro22438 Vaccinium macrocarpon HOM05D006574 ORTHO05D008210 2.0e-85 320.1 282 58.5
Rhsim07G0031300 Rhododendron simsii HOM05D006574 ORTHO05D008210 3.4e-85 319.3 282 58.9
Lj7P535T34 Lonicera japonica HOM05D006574 ORTHO05D008210 2.2e-84 316.6 278 57.9
Eucgr.D02492 Eucalyptus grandis HOM05D006574 ORTHO05D008210 3.7e-84 315.8 330 53.3
Ah.05g173830 Amaranthus hybridus HOM05D006574 ORTHO05D008210 9.2e-83 311.2 291 55.0
ECA240G1589 Erigeron canadensis HOM05D006574 ORTHO05D008210 9.2e-83 311.2 324 50.3
HanXRQChr03g0093261 Helianthus annuus HOM05D006574 ORTHO05D008210 1.3e-81 307.4 274 55.5
Oeu000020.1 Olea europaea HOM05D006574 ORTHO05D008210 1.7e-81 307.0 335 51.6
Nn6g33974 Nelumbo nucifera HOM05D006574 ORTHO05D008210 5.6e-80 302.0 266 57.9
MSTRG.4912 Avicennia marina HOM05D006574 ORTHO05D008210 7.3e-80 301.6 268 57.8
Gorai.004G163900 Gossypium raimondii HOM05D006574 ORTHO05D008210 1.8e-78 297.0 335 48.4
Migut.L01604 Erythranthe guttata HOM05D006574 ORTHO05D008210 9.9e-77 291.2 297 54.9
HanXRQChr13g0423061 Helianthus annuus HOM05D006574 ORTHO05D008210 1.4e-75 287.3 285 52.6
Lsat_1_v5_gn_3_129181 Lactuca sativa HOM05D006574 ORTHO05D008210 5.4e-75 285.4 326 46.6
Gohir.D08G157700 Gossypium hirsutum HOM05D006574 ORTHO05D008210 9.2e-75 284.6 323 48.9
Os04g0534500 Oryza sativa ssp. japonica HOM05D006574 ORTHO05D008210 2.1e-74 283.5 332 49.1
Migut.N01615 Erythranthe guttata HOM05D006574 ORTHO05D008210 3.0e-73 279.6 219 64.4
Actinidia22763 Actinidia chinensis HOM05D006574 ORTHO05D008210 2.5e-72 276.6 305 51.8
ATR0317G043 Amborella trichopoda HOM05D006574 ORTHO05D008210 8.9e-70 268.1 311 49.2
Gohir.A08G136900 Gossypium hirsutum HOM05D006574 ORTHO05D008210 1.5e-69 267.3 211 60.7
Sc02g0002790 Simmondsia chinensis HOM05D006574 ORTHO05D008210 1.7e-68 263.8 193 66.8
unitig_8.g3385 Utricularia gibba HOM05D006574 ORTHO05D008210 1.7e-68 263.8 268 53.4
HanXRQChr13g0422971 Helianthus annuus HOM05D006574 ORTHO05D008210 1.1e-64 251.1 198 59.6
HPP92_027018 Vanilla planifolia HOM05D006574 ORTHO05D008210 2.0e-61 240.4 198 61.1
CDE12G0059 Ceratophyllum demersum HOM05D006574 ORTHO05D008210 1.7e-60 237.3 216 56.0
SGA_v2.0_scaffold43G16514 Striga asiatica HOM05D006574 ORTHO05D008210 1.6e-58 230.7 194 60.3
SEGI_22327 Sequoiadendron giganteum HOM05D006574 ORTHO05D008210 4.3e-56 222.6 231 50.6
AagrBONN_evm.TU.Sc2ySwM_117.2636 Anthoceros agrestis HOM05D006574 ORTHO05D008210 5.6e-48 195.7 247 44.1
TAR374G1600 Trochodendron aralioides HOM05D006574 ORTHO05D008210 4.9e-44 182.6 162 56.2
Actinidia22819 Actinidia chinensis HOM05D006574 ORTHO05D008210 2.7e-42 176.8 182 52.7
Mapoly0010s0201 Marchantia polymorpha HOM05D006574 ORTHO05D008210 8.7e-41 171.8 210 46.2
HanXRQChr13g0422981 Helianthus annuus HOM05D006574 ORTHO05D008210 4.2e-35 152.9 200 45.5
HPP92_027026 Vanilla planifolia HOM05D006574 ORTHO05D008210 2.0e-21 107.5 78 64.1
Zm00001eb427440 Zea mays HOM05D006574 ORTHO05D008210 1.9e-19 100.9 138 47.1
vmacro22439 Vaccinium macrocarpon HOM05D006574 ORTHO05D008210 2.8e-15 87.0 58 65.5
Atru.chr5.248 Acer truncatum HOM05D006574 ORTHO05D008210 8.2e-15 85.5 60 61.7
Hma1.2p1_0386F.1_g141840 Hydrangea macrophylla HOM05D006574 ORTHO05D008210 9.4e-11 72.0 106 38.7
AagrBONN_evm.TU.Sc2ySwM_344.2339 Anthoceros agrestis HOM05D025526 ORTHO05D023512 8.0e-10 68.9 204 27.9
CAN.G22.19 Capsicum annuum HOM05D003072 ORTHO05D008464 2.3e-09 67.4 193 29.5
SalBow5G5496 Salvia bowleyana HOM05D003072 ORTHO05D008464 5.2e-09 66.2 178 29.8
SGA_v2.0_scaffold25G10826 Striga asiatica HOM05D003072 ORTHO05D008464 5.2e-09 66.2 195 30.8
TAR374G0556 Trochodendron aralioides HOM05D006574 ORTHO05D008210 5.2e-09 66.2 109 34.9
PGSC0003DMG400005293 Solanum tuberosum HOM05D003072 ORTHO05D008464 6.7e-09 65.9 193 28.5
CANSAT80G0622 Cannabis sativa HOM05D003072 ORTHO05D008464 8.8e-09 65.5 175 26.9
Cc04_g12330 Coffea canephora HOM05D003072 ORTHO05D008464 8.8e-09 65.5 178 30.9
Lsat_1_v5_gn_1_28241 Lactuca sativa HOM05D003072 ORTHO05D008464 8.8e-09 65.5 177 29.9
Potri.012G088700 Populus trichocarpa HOM05D003072 ORTHO05D008464 1.2e-08 65.1 179 30.2
Prupe.5G170600 Prunus persica HOM05D003072 ORTHO05D008464 1.5e-08 64.7 196 29.1
TAR629G1829 Trochodendron aralioides HOM05D003072 ORTHO05D008464 2.6e-08 63.9 179 27.9
COL.COLO4_30098 Corchorus olitorius HOM05D003072 ORTHO05D008464 5.7e-08 62.8 176 30.1
GSVIVG01007705001 Vitis vinifera HOM05D003072 ORTHO05D008464 5.7e-08 62.8 179 30.7
MD06G1171000 Malus domestica HOM05D003072 ORTHO05D008464 7.5e-08 62.4 196 28.6
Nitab4.5_0000025g0470 Nicotiana tabacum HOM05D003072 ORTHO05D008464 7.5e-08 62.4 176 28.4
Nitab4.5_0014195g0010 Nicotiana tabacum HOM05D003072 ORTHO05D008464 7.5e-08 62.4 176 28.4
Aqoxy3G02847 Aquilegia oxysepala HOM05D003072 ORTHO05D008464 1.3e-07 61.6 206 27.7
Dinv38563 Davidia involucrata HOM05D003072 ORTHO05D008464 1.3e-07 61.6 187 28.3
Mapoly0088s0089 Marchantia polymorpha HOM05D025526 ORTHO05D023512 1.3e-07 61.6 259 25.9
Sabra12G0063900 Salix brachista HOM05D003072 ORTHO05D008464 1.3e-07 61.6 179 29.1
Thecc.03G018600 Theobroma cacao HOM05D003072 ORTHO05D008464 1.3e-07 61.6 176 29.0
Migut.O00122 Erythranthe guttata HOM05D003072 ORTHO05D008464 1.7e-07 61.2 181 28.7
TWI23G0250 Tripterygium wilfordii HOM05D003072 ORTHO05D008464 1.7e-07 61.2 183 29.5
Actinidia19109 Actinidia chinensis HOM05D003072 ORTHO05D008464 2.2e-07 60.8 179 28.5
ECA247G2325 Erigeron canadensis HOM05D003072 ORTHO05D008464 2.2e-07 60.8 204 27.5
vmacro16626 Vaccinium macrocarpon HOM05D003072 ORTHO05D008464 2.2e-07 60.8 192 29.2
Rhsim12G0166200 Rhododendron simsii HOM05D003072 ORTHO05D008464 2.8e-07 60.5 200 28.0
ATR1152G060 Amborella trichopoda HOM05D003072 ORTHO05D008464 3.7e-07 60.1 178 30.3
TAR371G0662 Trochodendron aralioides HOM05D003072 ORTHO05D008464 3.7e-07 60.1 175 26.9
Lalb_Chr23g0273311 Lupinus albus HOM05D003072 ORTHO05D008464 4.8e-07 59.7 179 29.1
Pp3c21_4590 Physcomitrium patens HOM05D003072 ORTHO05D008464 4.8e-07 59.7 209 28.7
Cfa019166 Carpinus fangiana HOM05D003072 ORTHO05D008464 6.3e-07 59.3 204 26.0
HanXRQChr02g0035971 Helianthus annuus HOM05D003072 ORTHO05D008464 6.3e-07 59.3 175 28.6
VMungo1215G1540 Vigna mungo HOM05D003072 ORTHO05D008464 8.2e-07 58.9 171 28.1
QL10p010881 Quercus lobata HOM05D003072 ORTHO05D008464 1.4e-06 58.2 175 29.1
Atru.chr9.2517 Acer truncatum HOM05D003072 ORTHO05D008464 2.4e-06 57.4 202 28.2
CDE06G1157 Ceratophyllum demersum HOM05D003072 ORTHO05D008464 2.4e-06 57.4 168 34.5
Glyma.05G039200 Glycine max HOM05D003072 ORTHO05D008464 2.4e-06 57.4 211 27.5
MD14G1176700 Malus domestica HOM05D003072 ORTHO05D008464 2.4e-06 57.4 195 28.2
AagrBONN_evm.TU.Sc2ySwM_228.2830 Anthoceros agrestis HOM05D025526 ORTHO05D023512 3.1e-06 57.0 247 26.7
ClCG06G017110 Citrullus lanatus HOM05D003072 ORTHO05D008464 3.1e-06 57.0 167 31.7
Duzib068G0599 Durio zibethinus HOM05D003072 ORTHO05D008464 3.1e-06 57.0 176 28.4
Glyma.05G039300 Glycine max HOM05D003072 ORTHO05D008464 4.1e-06 56.6 219 27.4
Manes.06G107000 Manihot esculenta HOM05D003072 ORTHO05D008464 4.1e-06 56.6 204 26.5
Ciclev10020708m.g Citrus clementina HOM05D003072 ORTHO05D008464 7.0e-06 55.8 179 28.5
FAN04G2540 Fragaria x ananassa HOM05D003072 ORTHO05D008464 9.1e-06 55.5 179 26.3
FAN18G1595 Fragaria x ananassa HOM05D005107 ORTHO05D008464 9.1e-06 55.5 179 26.3
FAN18G3341 Fragaria x ananassa HOM05D003072 ORTHO05D008464 9.1e-06 55.5 179 26.3


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