Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR169990 Cardamine hirsuta HOM05D000976 ORTHO05D116262 5.3e-93 344.4 176 100.0
Hund16153 Selenicereus undatus HOM05D000976 ORTHO05D000008 1.3e-11 73.9 68 54.4
Thhalv10006159m.g Eutrema salsugineum HOM05D000976 ORTHO05D000847 9.0e-08 61.2 61 52.5
AL5G42480 Arabidopsis lyrata HOM05D000976 ORTHO05D000847 1.5e-07 60.5 46 63.0
BcaB02g08180 Brassica carinata HOM05D000976 ORTHO05D000847 2.0e-07 60.1 50 60.0
BcaNung07208 Brassica carinata HOM05D000976 ORTHO05D000847 2.0e-07 60.1 46 63.0
A07p25050 Brassica napus HOM05D001766 ORTHO05D001875 2.0e-07 60.1 46 63.0
C08p35300 Brassica napus HOM05D000976 ORTHO05D000847 2.0e-07 60.1 46 63.0
BolC8t51123H Brassica oleracea HOM05D000976 ORTHO05D000847 2.0e-07 60.1 46 63.0
BraA07t30145Z Brassica rapa HOM05D001766 ORTHO05D001875 2.0e-07 60.1 46 63.0
Sp5g02940 Schrenkiella parvula HOM05D000976 ORTHO05D000847 2.0e-07 60.1 46 63.0
AT3G60260 Arabidopsis thaliana HOM05D000976 ORTHO05D000847 2.6e-07 59.7 46 63.0
BcaB02g07423 Brassica carinata HOM05D000976 ORTHO05D000847 2.6e-07 59.7 46 60.9
BcaC08g45047 Brassica carinata HOM05D000976 ORTHO05D000847 2.6e-07 59.7 46 60.9
CARHR170580 Cardamine hirsuta HOM05D000976 ORTHO05D000847 2.6e-07 59.7 46 63.0
A09p52540 Brassica napus HOM05D000976 ORTHO05D000847 3.4e-07 59.3 46 63.0
BraA09t40685Z Brassica rapa HOM05D000976 ORTHO05D000847 3.4e-07 59.3 46 63.0
Carub.0005s2701 Capsella rubella HOM05D000976 ORTHO05D000847 3.4e-07 59.3 50 56.0
BcaC08g45045 Brassica carinata HOM05D000976 ORTHO05D000847 4.5e-07 58.9 46 60.9
C06p26660 Brassica napus HOM05D001766 ORTHO05D001875 4.5e-07 58.9 46 60.9
BolC6t37827H Brassica oleracea HOM05D000976 ORTHO05D000847 4.5e-07 58.9 46 60.9
BcaC07g40421 Brassica carinata HOM05D000263 ORTHO05D000213 7.6e-07 58.2 49 59.2
BcaC02g10142 Brassica carinata HOM05D000976 ORTHO05D000847 9.9e-07 57.8 57 50.9
Glyma.03G109400 Glycine max HOM05D000976 ORTHO05D000847 9.9e-07 57.8 46 58.7
Glyma.07G116000 Glycine max HOM05D000976 ORTHO05D000847 9.9e-07 57.8 46 58.7
Phvul.010G045300 Phaseolus vulgaris HOM05D000976 ORTHO05D000847 9.9e-07 57.8 46 58.7
VMungo0331G1515 Vigna mungo HOM05D000976 ORTHO05D000847 9.9e-07 57.8 46 58.7
A04p33470 Brassica napus HOM05D000976 ORTHO05D000847 1.3e-06 57.4 39 66.7
Aa31LG10G14370 Aethionema arabicum HOM05D000976 ORTHO05D000847 1.7e-06 57.0 50 54.0
C04p32390 Brassica napus HOM05D000976 ORTHO05D000847 2.2e-06 56.6 57 49.1
BolC4t24787H Brassica oleracea HOM05D000976 ORTHO05D000847 2.2e-06 56.6 57 49.1
BraA04t15898Z Brassica rapa HOM05D000976 ORTHO05D000847 2.2e-06 56.6 45 62.2
Lalb_Chr03g0040691 Lupinus albus HOM05D000976 ORTHO05D000847 2.2e-06 56.6 46 56.5
Aa31LG1G26320 Aethionema arabicum HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
AL364U10010 Arabidopsis lyrata HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
AL4G43850 Arabidopsis lyrata HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
BcaC02g07112 Brassica carinata HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
C04p71230 Brassica napus HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
BolC4t28627H Brassica oleracea HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
BraA04t18809Z Brassica rapa HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
CARHR139990 Cardamine hirsuta HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
Thhalv10001587m.g Eutrema salsugineum HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
Lj3g0015915 Lotus japonicus HOM05D000976 ORTHO05D000847 2.9e-06 56.2 46 54.3
Sp4g26840 Schrenkiella parvula HOM05D000976 ORTHO05D000847 2.9e-06 56.2 39 64.1
A04p01740 Brassica napus HOM05D000976 ORTHO05D000847 3.8e-06 55.8 45 60.0
Glyma.09G243900 Glycine max HOM05D000976 ORTHO05D000847 3.8e-06 55.8 42 59.5
Lsat_1_v5_gn_4_39281 Lactuca sativa HOM05D000976 ORTHO05D000847 3.8e-06 55.8 59 45.8
Lalb_Chr19g0126321 Lupinus albus HOM05D000976 ORTHO05D000847 3.8e-06 55.8 58 48.3
Sabra14G0035300 Salix brachista HOM05D000976 ORTHO05D000847 3.8e-06 55.8 61 49.2
TWI59G0024 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 3.8e-06 55.8 52 50.0
Potri.002G138700 Populus trichocarpa HOM05D000976 ORTHO05D000847 4.9e-06 55.5 46 54.3
BcaB06g29399 Brassica carinata HOM05D000976 ORTHO05D000847 6.4e-06 55.1 39 61.5
Cpa.g.sc22.42 Carica papaya HOM05D000976 ORTHO05D000847 6.4e-06 55.1 46 58.7
THA.LOC104827590 Tarenaya hassleriana HOM05D000976 ORTHO05D000847 6.4e-06 55.1 45 60.0
Carub.0004s2734 Capsella rubella HOM05D000976 ORTHO05D000847 8.4e-06 54.7 39 61.5


User provided reference genes

Program Settings