Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR165710 Cardamine hirsuta HOM05D001463 ORTHO05D001282 1.2e-37 160.2 146 100.0
AL5G36870 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 3.1e-30 135.6 148 78.4
Sp5g06820 Schrenkiella parvula HOM05D001463 ORTHO05D001282 1.4e-25 120.2 146 67.8
BcaC07g39895 Brassica carinata HOM05D001463 ORTHO05D001282 1.8e-25 119.8 145 69.0
Carub.0005s2241 Capsella rubella HOM05D001463 ORTHO05D001282 2.0e-24 116.3 152 61.2
BcaB02g08404 Brassica carinata HOM05D001463 ORTHO05D001282 2.6e-24 115.9 126 51.6
BcaC02g09782 Brassica carinata HOM05D001463 ORTHO05D001282 5.7e-24 114.8 146 52.7
BolC8t50722H Brassica oleracea HOM05D001463 ORTHO05D001282 5.7e-24 114.8 139 68.3
BcaB01g00071 Brassica carinata HOM05D001463 ORTHO05D001282 7.4e-24 114.4 125 63.2
Thhalv10010805m.g Eutrema salsugineum HOM05D001463 ORTHO05D001282 7.4e-24 114.4 147 76.9
A09p48650 Brassica napus HOM05D001463 ORTHO05D001282 6.3e-23 111.3 142 66.2
AT3G55646 Arabidopsis thaliana HOM05D001463 ORTHO05D001282 4.1e-22 108.6 148 75.7
C08p30990 Brassica napus HOM05D001463 ORTHO05D001282 7.0e-22 107.8 123 65.9
A04p04330 Brassica napus HOM05D001463 ORTHO05D001282 1.5e-21 106.7 126 47.6
BraA04t16144Z Brassica rapa HOM05D001463 ORTHO05D001282 1.5e-21 106.7 126 47.6
C04p36660 Brassica napus HOM05D001463 ORTHO05D001282 2.0e-21 106.3 145 49.7
BolC4t25129H Brassica oleracea HOM05D001463 ORTHO05D001282 2.0e-21 106.3 145 49.7
BraA09t40317Z Brassica rapa HOM05D001463 ORTHO05D001282 1.2e-18 97.1 83 74.7
THA.LOC104810063 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 1.4e-14 83.6 150 48.7
BcaC02g12118 Brassica carinata HOM05D001463 ORTHO05D001282 7.7e-13 77.8 152 43.4
BcaB02g09078 Brassica carinata HOM05D001463 ORTHO05D001282 1.7e-12 76.6 151 43.7
Thhalv10017636m.g Eutrema salsugineum HOM05D001463 ORTHO05D001282 2.9e-12 75.9 84 61.9
A05p06550 Brassica napus HOM05D001463 ORTHO05D001282 6.5e-12 74.7 149 40.3
C04p07650 Brassica napus HOM05D001463 ORTHO05D001282 1.9e-11 73.2 149 43.0
C04p67640 Brassica napus HOM05D001463 ORTHO05D001282 2.5e-11 72.8 149 39.6
BolC4t28263H Brassica oleracea HOM05D001463 ORTHO05D001282 2.5e-11 72.8 149 39.6
AL4G37420 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 3.2e-11 72.4 148 39.2
A04p30220 Brassica napus HOM05D001463 ORTHO05D001282 7.2e-11 71.2 149 54.4
BraA04t18486Z Brassica rapa HOM05D001463 ORTHO05D001282 7.2e-11 71.2 149 54.4
BolC4t22381H Brassica oleracea HOM05D001463 ORTHO05D001282 2.1e-10 69.7 157 42.0
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 2.7e-10 69.3 159 32.1
BraA05t19624Z Brassica rapa HOM05D001463 ORTHO05D001282 4.7e-10 68.6 157 41.4
Cpa.g.sc19.255 Carica papaya HOM05D001463 ORTHO05D001282 1.4e-09 67.0 150 37.3
Sp4g22150 Schrenkiella parvula HOM05D001463 ORTHO05D001282 3.0e-09 65.9 152 41.4
Carub.0004s2198 Capsella rubella HOM05D001463 ORTHO05D001282 5.2e-09 65.1 87 52.9
BcaB02g09079 Brassica carinata HOM05D001463 ORTHO05D001282 4.4e-08 62.0 85 60.0
BcaB02g09077 Brassica carinata HOM05D001463 ORTHO05D001282 6.3e-07 58.2 149 40.3
QL08p062024 Quercus lobata HOM05D001463 ORTHO05D001282 8.2e-07 57.8 157 30.6
CiPaw.02G188100 Carya illinoinensis HOM05D001463 ORTHO05D001282 1.1e-06 57.4 170 30.0
Potri.010G196400 Populus trichocarpa HOM05D001463 ORTHO05D001282 5.3e-06 55.1 156 30.1
CARHR134770 Cardamine hirsuta HOM05D001463 ORTHO05D001282 7.0e-06 54.7 149 39.6


User provided reference genes

Program Settings