Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 5.8e-68 260.8 133 100.0
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.8e-56 222.6 136 87.5
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 3.0e-56 221.9 132 84.1
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 2.5e-55 218.8 135 84.4
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.3e-54 216.5 133 85.0
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 8.2e-54 213.8 135 85.2
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 9.1e-53 210.3 132 85.6
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.5e-52 209.5 132 84.8
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.5e-52 209.5 132 84.8
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 6.5e-51 204.1 138 81.9
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.4e-50 203.0 138 81.2
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 3.6e-49 198.4 134 83.6
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 1.0e-48 196.8 134 82.1
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 1.0e-48 196.8 134 82.1
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 6.3e-46 187.6 135 78.5
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 8.2e-46 187.2 129 80.6
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 1.1e-45 186.8 130 75.4
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 2.7e-41 172.2 140 67.9
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 4.8e-38 161.4 142 62.7
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 8.2e-38 160.6 142 62.7
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.8e-37 159.5 136 64.7
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 5.3e-37 157.9 135 63.0
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 1.6e-36 156.4 106 72.6
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 3.5e-36 155.2 141 61.7
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 3.5e-36 155.2 91 81.3
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 4.5e-36 154.8 137 63.5
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 5.9e-36 154.5 125 64.8
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 1.0e-35 153.7 138 62.3
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 2.2e-35 152.5 118 66.1
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 2.2e-35 152.5 106 72.6
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.9e-35 152.1 133 60.9
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 3.8e-35 151.8 143 61.5
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 3.8e-35 151.8 141 61.0
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 8.5e-35 150.6 167 53.3
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.1e-34 150.2 122 68.0
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.1e-34 150.2 133 61.7
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.5e-34 149.8 132 60.6
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 1.5e-34 149.8 137 59.1
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.5e-34 149.8 143 60.1
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.9e-34 149.4 110 70.9
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 2.5e-34 149.1 127 61.4
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 2.5e-34 149.1 105 69.5
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 2.5e-34 149.1 112 66.1
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 3.2e-34 148.7 110 70.0
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 9.4e-34 147.1 92 78.3
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 9.4e-34 147.1 142 59.9
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 9.4e-34 147.1 106 68.9
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 1.2e-33 146.7 132 61.4
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 1.6e-33 146.4 102 70.6
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 2.1e-33 146.0 90 77.8
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.1e-33 146.0 102 70.6
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.7e-33 145.6 88 79.5
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 3.6e-33 145.2 127 57.5
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 3.6e-33 145.2 105 67.6
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 4.7e-33 144.8 102 70.6
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 6.1e-33 144.4 101 70.3
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 8.0e-33 144.1 136 61.8
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.4e-32 143.3 142 57.7
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.8e-32 142.9 122 63.9
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 2.3e-32 142.5 143 59.4
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 2.3e-32 142.5 113 68.1
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 4.0e-32 141.7 107 67.3
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 5.2e-32 141.4 90 75.6
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-31 140.2 139 59.0
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.5e-31 139.8 143 58.7
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 1.5e-31 139.8 135 61.5
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.0e-31 139.4 89 74.2
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 2.6e-31 139.0 90 74.4
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 2.6e-31 139.0 119 65.5
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 3.4e-31 138.7 87 80.5
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 3.4e-31 138.7 87 74.7
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 4.4e-31 138.3 119 68.9
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 4.4e-31 138.3 109 66.1
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 7.5e-31 137.5 112 66.1
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 7.5e-31 137.5 91 74.7
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 2.8e-30 135.6 146 54.8
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 3.7e-30 135.2 115 61.7
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 4.8e-30 134.8 137 56.9
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 6.3e-30 134.4 115 61.7
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.1e-29 133.7 88 77.3
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 1.1e-29 133.7 86 76.7
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 3.1e-29 132.1 149 55.0
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 7.0e-29 131.0 105 61.9
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 1.6e-28 129.8 90 74.4
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 3.5e-28 128.6 106 63.2
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 2.5e-26 122.5 74 78.4
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.2e-26 121.7 86 72.1
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 3.6e-25 118.6 68 79.4
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 4.7e-25 118.2 71 77.5
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 1.4e-24 116.7 80 73.8
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 5.2e-24 114.8 79 73.4
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.5e-23 113.2 65 80.0
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 5.4e-21 104.8 123 51.2
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 1.7e-19 99.8 108 50.9
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 2.9e-19 99.0 103 45.6
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.0e-17 90.9 86 59.3
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 8.3e-14 80.9 72 58.3
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.2e-12 77.0 127 40.9
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 1.3e-11 73.6 110 38.2
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 1.2e-09 67.0 81 39.5
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 4.7e-09 65.1 46 63.0


User provided reference genes

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