Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR162140 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.0e-56 221.5 102 100.0
AL5G33270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.1e-29 130.2 102 57.8
A03p48830 Brassica napus HOM05D000171 ORTHO05D000101 6.5e-27 124.0 93 60.2
BraA03t13983Z Brassica rapa HOM05D000171 ORTHO05D000101 6.5e-27 124.0 93 60.2
AL7G45230 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-26 123.2 91 58.2
Carub.0005s1893 Capsella rubella HOM05D000171 ORTHO05D000101 1.9e-26 122.5 90 60.0
C07p46920 Brassica napus HOM05D000171 ORTHO05D000101 4.2e-26 121.3 93 59.1
BolC7t45208H Brassica oleracea HOM05D000171 ORTHO05D000101 4.2e-26 121.3 93 59.1
AL5G33220 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.2e-26 120.6 89 59.6
Carub.0003s2329 Capsella rubella HOM05D000171 ORTHO05D000101 8.0e-25 117.1 90 58.9
AL3G37620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-24 116.3 90 60.0
AL7G44280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.0e-24 114.8 90 60.0
Carub.0005s1873 Capsella rubella HOM05D000171 ORTHO05D000101 6.8e-24 114.0 91 59.3
AL5G33030 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-23 113.2 90 62.2
BcaB01g00377 Brassica carinata HOM05D000171 ORTHO05D000101 4.4e-23 111.3 100 56.0
A09p45420 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-23 111.3 88 62.5
BraA09t40004Z Brassica rapa HOM05D000171 ORTHO05D000101 4.4e-23 111.3 88 62.5
AT3G52510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.4e-21 106.3 102 49.0
AL5G32970 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-21 105.9 90 51.1
BcaB01g00375 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-21 105.5 92 58.7
Carub.0001s2255 Capsella rubella HOM05D000171 ORTHO05D000101 4.1e-21 104.8 91 52.7
AT3G52320 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.9e-18 95.9 89 57.3
BcaB01g00382 Brassica carinata HOM05D000171 ORTHO05D000101 2.5e-18 95.5 93 50.5
CARHR162100 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.5e-18 95.5 92 52.2
A09p45340 Brassica napus HOM05D000171 ORTHO05D000101 3.3e-18 95.1 93 51.6
BraA09t39997Z Brassica rapa HOM05D000171 ORTHO05D000101 3.3e-18 95.1 93 51.6
BraA09t39998Z Brassica rapa HOM05D000171 ORTHO05D000101 3.3e-18 95.1 93 51.6
BcaB01g00383 Brassica carinata HOM05D000171 ORTHO05D000101 5.6e-18 94.4 93 50.5
AL5G32890 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-17 93.2 98 51.0
BcaB01g00443 Brassica carinata HOM05D000171 ORTHO05D032310 1.2e-17 93.2 93 53.8
AL5G32950 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-16 89.7 92 51.1
Carub.0003s3063 Capsella rubella HOM05D000171 ORTHO05D000101 2.6e-15 85.5 92 47.8
Thhalv10019615m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.5e-15 84.0 93 44.1
Thhalv10019649m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.7e-14 81.6 91 46.2
Thhalv10019684m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-13 79.3 95 42.1
AL3G47620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.4e-13 79.0 106 41.5
Carub.0005s1891 Capsella rubella HOM05D000171 ORTHO05D000101 4.1e-13 78.2 91 44.0
BraA10t43382Z Brassica rapa HOM05D000171 ORTHO05D000101 5.4e-13 77.8 91 45.1
CARHR182090 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.4e-13 77.8 91 46.2
Thhalv10005397m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-12 76.6 93 44.1
AL4G38850 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-12 76.3 94 39.4
CARHR136020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.6e-12 76.3 91 42.9
Carub.0004s2438 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-12 75.9 94 37.2
BcaC04g20172 Brassica carinata HOM05D000171 ORTHO05D000101 3.5e-12 75.1 90 44.4
C09p47030 Brassica napus HOM05D000171 ORTHO05D000101 3.5e-12 75.1 90 44.4
AT2G40920 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.6e-12 74.7 91 45.1
BcaC04g19915 Brassica carinata HOM05D000171 ORTHO05D000101 7.8e-12 73.9 90 43.3
Carub.0004s2322 Capsella rubella HOM05D000171 ORTHO05D000101 7.8e-12 73.9 91 45.1
BolC7t45551H Brassica oleracea HOM05D000171 ORTHO05D000101 1.3e-11 73.2 90 37.8
AL4G38860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-11 72.8 93 44.1
AT2G40910 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.7e-11 72.8 94 37.2
Sp1g05850 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.7e-11 72.8 90 41.1
AT5G62660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.3e-11 72.4 90 40.0
Carub.0003s3064 Capsella rubella HOM05D000171 ORTHO05D000101 2.3e-11 72.4 92 37.0
Thhalv10016561m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.0e-11 72.0 98 37.8
Sp1g09440 Schrenkiella parvula HOM05D000171 ORTHO05D000101 6.6e-11 70.9 90 41.1
BcaC01g05368 Brassica carinata HOM05D000171 ORTHO05D000101 8.6e-11 70.5 92 39.1
A08p00330 Brassica napus HOM05D000171 ORTHO05D000101 8.6e-11 70.5 92 34.8
C03p27380 Brassica napus HOM05D000171 ORTHO05D000101 8.6e-11 70.5 92 39.1
BolC3t15119H Brassica oleracea HOM05D000171 ORTHO05D000101 8.6e-11 70.5 92 39.1
BcaB01g02781 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-10 70.1 101 41.6
BcaB01g03500 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-10 69.7 92 39.1
BcaB01g03501 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-10 69.7 92 39.1
AT4G19940 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.9e-10 69.3 89 39.3
C03p93170 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-10 69.3 92 34.8
BraA08t32091Z Brassica rapa HOM05D000171 ORTHO05D000101 2.5e-10 68.9 92 33.7
Carub.0007s2124 Capsella rubella HOM05D000171 ORTHO05D000101 3.3e-10 68.6 90 37.8
Thhalv10025237m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.3e-10 68.2 89 40.4
Sp4g23370 Schrenkiella parvula HOM05D000171 ORTHO05D000101 9.5e-10 67.0 88 37.5
BolC8t49012H Brassica oleracea HOM05D000171 ORTHO05D000101 1.6e-09 66.2 88 39.8
AL1G54860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.1e-09 65.9 93 38.7
BcaC03g15472 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-09 65.9 90 38.9
BcaC08g43649 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-09 65.9 90 37.8
A02p18970 Brassica napus HOM05D000171 ORTHO05D000101 2.1e-09 65.9 90 38.9
A03p23050 Brassica napus HOM05D000171 ORTHO05D000101 2.1e-09 65.9 91 38.5
C06p10670 Brassica napus HOM05D000171 ORTHO05D000101 2.1e-09 65.9 90 37.8
BolC6t36149H Brassica oleracea HOM05D000171 ORTHO05D000101 2.1e-09 65.9 90 37.8
BraA02t06939Z Brassica rapa HOM05D000171 ORTHO05D000101 2.1e-09 65.9 90 38.9
BraA03t11528Z Brassica rapa HOM05D000171 ORTHO05D000101 2.1e-09 65.9 91 38.5
AL3G14200 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-09 65.5 90 40.0
AL5G33260 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-09 65.5 51 51.0
AL4G38870 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-09 65.1 91 37.4
Carub.0008s2318 Capsella rubella HOM05D000171 ORTHO05D000101 3.6e-09 65.1 88 37.5
Thhalv10008003m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.6e-09 65.1 94 36.2
AL7G33990 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.7e-09 64.7 87 36.8
BcaC05g26731 Brassica carinata HOM05D000171 ORTHO05D000101 4.7e-09 64.7 90 42.2
C06p10710 Brassica napus HOM05D000171 ORTHO05D000101 4.7e-09 64.7 85 36.5
BolC6t36157H Brassica oleracea HOM05D000171 ORTHO05D000101 4.7e-09 64.7 85 36.5
BcaC01g01564 Brassica carinata HOM05D000171 ORTHO05D000101 6.2e-09 64.3 92 33.7
C03p27370 Brassica napus HOM05D000171 ORTHO05D000101 6.2e-09 64.3 92 35.9
C03p27440 Brassica napus HOM05D000171 ORTHO05D000101 6.2e-09 64.3 92 35.9
BolC3t15117H Brassica oleracea HOM05D000171 ORTHO05D000101 6.2e-09 64.3 92 35.9
BolC3t15121H Brassica oleracea HOM05D000171 ORTHO05D000101 6.2e-09 64.3 92 35.9
BolC3t21616H Brassica oleracea HOM05D000171 ORTHO05D000101 6.2e-09 64.3 92 33.7
BraA08t32678Z Brassica rapa HOM05D000171 ORTHO05D000101 6.2e-09 64.3 90 37.8
AL4G31270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.0e-09 63.9 89 38.2
CARHR276420 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.0e-09 63.9 93 39.8
Thhalv10005275m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.0e-09 63.9 90 37.8
BraA06t23214Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-08 63.5 89 34.8
C02p31520 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-08 63.2 77 40.3
BolC2t12282H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-08 63.2 90 38.9
Carub.0008s2338 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-08 63.2 90 36.7
CARHR226260 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.4e-08 63.2 92 35.9
BcaB03g13266 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-08 62.8 89 37.1
BcaB06g26495 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-08 62.8 93 37.6
Carub.0007s2126 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-08 62.8 90 37.8
BcaB03g11646 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-08 62.4 84 39.3
BcaB03g13267 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-08 62.4 89 37.1
BcaC02g10524 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-08 62.4 92 41.3
Thhalv10004411m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.3e-08 62.4 89 42.7
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.1e-08 62.0 88 38.6
Carub.0001s4456 Capsella rubella HOM05D000171 ORTHO05D000101 3.1e-08 62.0 95 38.9
BcaC06g31875 Brassica carinata HOM05D000171 ORTHO05D000101 4.0e-08 61.6 91 39.6
BcaC07g38624 Brassica carinata HOM05D000171 ORTHO05D000101 4.0e-08 61.6 89 37.1
C08p14200 Brassica napus HOM05D000171 ORTHO05D000101 4.0e-08 61.6 89 34.8
BcaB01g03499 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-08 61.2 92 35.9
BolC1t05729H Brassica oleracea HOM05D000171 ORTHO05D000101 5.2e-08 61.2 90 37.8
AL3G49550 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.8e-08 60.8 78 44.9
A02p18980 Brassica napus HOM05D000171 ORTHO05D000101 6.8e-08 60.8 88 37.5
CARHR276200 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.8e-08 60.8 93 37.6
AL3G14710 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.9e-08 60.5 88 37.5
BcaC07g38647 Brassica carinata HOM05D000171 ORTHO05D000101 8.9e-08 60.5 89 34.8
BcaC08g47087 Brassica carinata HOM05D000171 ORTHO05D000101 8.9e-08 60.5 90 45.6
BolC8t49058H Brassica oleracea HOM05D000171 ORTHO05D000101 8.9e-08 60.5 89 34.8
AT4G19930 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.2e-07 60.1 90 37.8
AT2G40925 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.5e-07 59.7 88 37.5
C07p50610 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-07 59.7 97 37.1
Carub.0005s0876 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-07 59.7 89 34.8
CARHR210940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.5e-07 59.7 75 36.0
AL8G39590 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-07 59.3 88 37.5
BcaC02g07628 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-07 59.3 89 37.1
A08p33570 Brassica napus HOM05D000171 ORTHO05D000101 2.0e-07 59.3 89 34.8
BolC4t27998H Brassica oleracea HOM05D000748 ORTHO05D000101 2.0e-07 59.3 89 37.1
Carub.0003s1002 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-07 59.3 88 38.6
BraA03t14292Z Brassica rapa HOM05D000171 ORTHO05D000101 2.6e-07 58.9 97 36.1
Thhalv10011525m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.6e-07 58.9 89 37.1
Thhalv10012025m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.6e-07 58.9 89 37.1
AL5G25950 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.4e-07 58.5 107 35.5
BcaB03g11650 Brassica carinata HOM05D000171 ORTHO05D000101 3.4e-07 58.5 84 40.5
BcaB06g26357 Brassica carinata HOM05D000171 ORTHO05D000101 3.4e-07 58.5 90 43.3
BcaB06g26388 Brassica carinata HOM05D000171 ORTHO05D000101 3.4e-07 58.5 90 43.3
BNapus_Darmor_BZH_scaffold_118p00140 Brassica napus HOM05D000171 ORTHO05D000101 3.4e-07 58.5 93 39.8
Carub.0007s2125 Capsella rubella HOM05D000171 ORTHO05D000101 3.4e-07 58.5 90 34.4
AL6G22600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.4e-07 58.2 92 34.8
Thhalv10005666m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.4e-07 58.2 103 39.8
AL8G39540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.8e-07 57.8 90 35.6
AL8G39570 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.8e-07 57.8 90 35.6
BcaC05g30178 Brassica carinata HOM05D000171 ORTHO05D000101 5.8e-07 57.8 90 43.3
Carub.0008s2334 Capsella rubella HOM05D000171 ORTHO05D000101 5.8e-07 57.8 91 38.5
Thhalv10022001m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.8e-07 57.8 98 36.7
Thhalv10028181m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.8e-07 57.8 103 41.7
AT1G55947 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.8e-07 57.0 89 36.0
BcaNung05348 Brassica carinata HOM05D000171 ORTHO05D000101 9.8e-07 57.0 92 39.1
BolC4t26697H Brassica oleracea HOM05D000171 ORTHO05D000101 9.8e-07 57.0 97 43.3
BcaC04g23284 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-06 56.6 90 35.6
A04p16950 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-06 56.6 100 37.0
C09p10160 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-06 56.6 90 35.6
BolC4t26742H Brassica oleracea HOM05D000171 ORTHO05D000101 1.7e-06 56.2 100 37.0
BraA01t04439Z Brassica rapa HOM05D000171 ORTHO05D000101 1.7e-06 56.2 93 38.7
BraA03t14296Z Brassica rapa HOM05D000171 ORTHO05D000101 1.7e-06 56.2 97 35.1
BraA04t17325Z Brassica rapa HOM05D000171 ORTHO05D000101 1.7e-06 56.2 100 36.0
BcaC02g08657 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-06 55.8 100 37.0
BcaC02g08658 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-06 55.8 100 37.0
BraA08t35273Z Brassica rapa HOM05D000171 ORTHO05D000101 2.2e-06 55.8 89 33.7
AL3G14720 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.9e-06 55.5 91 37.4
BcaC02g08701 Brassica carinata HOM05D000171 ORTHO05D000101 2.9e-06 55.5 100 36.0
Carub.0008s2333 Capsella rubella HOM05D000171 ORTHO05D000101 2.9e-06 55.5 85 40.0
Aa31LG11G6260 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.7e-06 55.1 94 36.2
AT5G62510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.7e-06 55.1 80 37.5
BcaC04g22265 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-06 55.1 92 39.1
BolC9t55046H Brassica oleracea HOM05D000171 ORTHO05D000101 3.7e-06 55.1 92 39.1
BolC9t55051H Brassica oleracea HOM05D000171 ORTHO05D000101 3.7e-06 55.1 92 39.1
CARHR276430 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.7e-06 55.1 74 40.5
BcaC01g00644 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-06 54.7 81 37.0
BcaC07g40029 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-06 54.7 90 33.3
BolC3t20543H Brassica oleracea HOM05D000171 ORTHO05D000101 4.9e-06 54.7 81 37.0
BraA09t38680Z Brassica rapa HOM05D000171 ORTHO05D000101 4.9e-06 54.7 92 38.0
CARHR226700 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.9e-06 54.7 74 36.5
Sp3g03500 Schrenkiella parvula HOM05D000171 ORTHO05D000101 4.9e-06 54.7 88 35.2
Aa31LG5G14750 Aethionema arabicum HOM05D000171 ORTHO05D000101 6.4e-06 54.3 83 31.3
A04p16510 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-06 54.3 97 42.3
A04p24710 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-06 54.3 97 34.0
BolC7t45568H Brassica oleracea HOM05D000171 ORTHO05D000101 6.4e-06 54.3 73 34.2
BraA04t17287Z Brassica rapa HOM05D000171 ORTHO05D000101 6.4e-06 54.3 97 42.3
Carub.0008s2317 Capsella rubella HOM05D000171 ORTHO05D000101 6.4e-06 54.3 95 37.9
AT1G23037 Arabidopsis thaliana HOM05D000171 ORTHO05D038788 8.3e-06 53.9 45 48.9
BcaC05g28010 Brassica carinata HOM05D000171 ORTHO05D000101 8.3e-06 53.9 90 42.2
BcaNung02553 Brassica carinata HOM05D000171 ORTHO05D000101 8.3e-06 53.9 89 33.7
C05p40240 Brassica napus HOM05D000171 ORTHO05D000101 8.3e-06 53.9 90 42.2
C09p21460 Brassica napus HOM05D000171 ORTHO05D000101 8.3e-06 53.9 92 39.1
BolC5t32766H Brassica oleracea HOM05D000171 ORTHO05D000101 8.3e-06 53.9 90 42.2
BolC7t45552H Brassica oleracea HOM05D000171 ORTHO05D000101 8.3e-06 53.9 74 39.2


User provided reference genes

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