Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.3e-38 162.5 81 100.0
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 1.3e-38 162.5 81 100.0
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 1.3e-38 162.5 81 100.0
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 2.9e-38 161.4 81 98.8
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 5.0e-38 160.6 81 97.5
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 2.5e-37 158.3 81 96.3
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 2.5e-37 158.3 81 96.3
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 2.5e-37 158.3 81 96.3
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 2.5e-37 158.3 81 96.3
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 2.5e-37 158.3 81 96.3
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 7.2e-37 156.8 81 95.1
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 3.6e-36 154.5 81 93.8
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 4.0e-35 151.0 81 90.1
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 1.2e-34 149.4 81 90.1
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.4e-34 147.9 81 88.9
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.4e-34 147.9 81 88.9
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 1.3e-33 146.0 81 87.7
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 2.2e-33 145.2 81 86.4
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 3.7e-33 144.4 81 85.2
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 4.9e-33 144.1 80 87.5
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 6.3e-33 143.7 80 86.2
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 8.3e-33 143.3 80 85.0
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 8.3e-33 143.3 80 86.2
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.8e-32 142.1 80 86.2
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.8e-32 142.1 80 86.2
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 1.8e-32 142.1 80 86.2
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 2.4e-32 141.7 80 86.2
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 2.0e-31 138.7 81 82.7
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 2.7e-31 138.3 80 82.5
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 3.5e-31 137.9 80 83.8
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 4.5e-31 137.5 80 81.2
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.5e-31 137.5 80 82.5
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 4.5e-31 137.5 81 81.5
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 4.5e-31 137.5 81 81.5
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 7.8e-31 136.7 80 82.5
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 7.8e-31 136.7 81 81.5
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.8e-31 136.7 81 81.5
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.8e-31 136.7 81 81.5
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.8e-31 136.7 81 81.5
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 7.8e-31 136.7 77 87.0
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 1.3e-30 136.0 80 80.0
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.7e-30 135.6 81 80.2
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.7e-30 135.6 81 80.2
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 3.8e-30 134.4 81 80.2
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 3.8e-30 134.4 76 84.2
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 5.0e-30 134.0 80 80.0
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 8.6e-30 133.3 80 80.0
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 8.6e-30 133.3 80 80.0
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.1e-29 132.9 92 73.9
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 1.1e-29 132.9 81 77.8
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.9e-29 132.1 81 79.0
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.9e-29 132.1 81 77.8
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 2.5e-29 131.7 76 86.8
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 3.3e-29 131.3 79 81.0
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 5.6e-29 130.6 80 80.0
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 1.6e-28 129.0 76 84.2
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 2.1e-28 128.6 76 85.5
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 4.7e-28 127.5 76 84.2
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.0e-27 126.3 77 81.8
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.4e-27 125.9 80 72.5
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 2.3e-27 125.2 68 94.1
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 2.3e-27 125.2 77 79.2
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 2.3e-27 125.2 76 81.6
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 2.3e-27 125.2 70 87.1
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 2.3e-27 125.2 77 81.8
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 5.2e-27 124.0 76 80.3
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 5.2e-27 124.0 70 85.7
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 5.2e-27 124.0 76 80.3
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 5.2e-27 124.0 77 74.0
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 8.9e-27 123.2 76 78.9
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.2e-26 122.9 76 80.3
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 2.0e-26 122.1 69 87.0
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 2.6e-26 121.7 81 72.8
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 4.4e-26 120.9 70 81.4
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 1.3e-25 119.4 81 72.8
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 1.3e-25 119.4 76 77.6
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.7e-25 119.0 69 82.6
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.9e-25 118.2 71 84.5
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 3.7e-25 117.9 76 73.7
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 4.9e-25 117.5 72 76.4
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 4.9e-25 117.5 76 77.6
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 4.9e-25 117.5 77 72.7
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 1.1e-24 116.3 72 75.0
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.1e-24 116.3 76 76.3
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.1e-24 116.3 76 76.3
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.4e-24 115.9 71 80.3
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.8e-24 115.5 77 71.4
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 3.2e-24 114.8 77 72.7
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 5.4e-24 114.0 71 80.3
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 5.4e-24 114.0 80 70.0
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.7e-23 111.7 77 68.8
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 4.6e-23 110.9 99 61.6
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 5.9e-23 110.5 68 80.9
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 7.8e-23 110.2 77 67.5
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.7e-22 109.0 76 71.1
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 8.6e-22 106.7 67 77.6
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 8.6e-22 106.7 70 78.6
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.1e-21 106.3 149 42.3
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 1.5e-21 105.9 102 59.8
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 5.6e-21 104.0 67 79.1
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 5.6e-21 104.0 68 76.5
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 1.2e-20 102.8 56 89.3
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 3.6e-20 101.3 55 89.1
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.5e-18 95.9 122 45.9
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 2.0e-18 95.5 77 64.9
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.4e-18 94.4 67 67.2
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 1.3e-17 92.8 68 66.2
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 6.4e-17 90.5 73 65.8
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 8.3e-17 90.1 56 78.6
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 8.3e-17 90.1 78 60.3
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 5.4e-16 87.4 52 86.5
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 9.2e-16 86.7 55 83.6
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.0e-15 85.5 67 67.2
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 2.7e-15 85.1 72 59.7
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 6.0e-15 84.0 52 80.8
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.0e-14 81.6 62 71.0
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 1.5e-13 79.3 73 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 4.3e-13 77.8 64 64.1
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 4.3e-13 77.8 62 67.7
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 5.6e-13 77.4 60 70.0
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 4.1e-08 61.2 39 82.1
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 9.2e-08 60.1 35 85.7
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 3.5e-07 58.2 54 53.7
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 5.1e-06 54.3 34 82.4


User provided reference genes

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