Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR153140 Cardamine hirsuta HOM05D000003 ORTHO05D014990 1.3e-180 636.3 329 100.0
BcaC02g09446 Brassica carinata HOM05D000003 ORTHO05D014990 4.4e-48 196.1 278 43.5
BcaB02g07414 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-46 188.7 344 38.4
BcaB04g17942 Brassica carinata HOM05D000496 ORTHO05D000411 9.1e-46 188.3 321 37.4
BraA01t02968Z Brassica rapa HOM05D000496 ORTHO05D000411 2.9e-44 183.3 248 40.7
BcaC07g38247 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-44 183.0 316 39.2
BcaB01g04400 Brassica carinata HOM05D000003 ORTHO05D000411 5.0e-44 182.6 281 40.2
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 2.3e-41 173.7 321 37.7
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 4.8e-39 166.0 322 34.5
BcaB02g08106 Brassica carinata HOM05D000003 ORTHO05D015466 1.8e-38 164.1 324 34.3
BcaB04g20334 Brassica carinata HOM05D000013 ORTHO05D000011 2.1e-34 150.6 214 39.3
BcaB07g32270 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-33 148.3 283 33.6
CARHR116610 Cardamine hirsuta HOM05D000003 ORTHO05D014990 1.8e-33 147.5 124 58.9
A06p37020 Brassica napus HOM05D000496 ORTHO05D000411 2.3e-33 147.1 307 30.9
BcaB01g02280 Brassica carinata HOM05D000003 ORTHO05D001498 8.9e-33 145.2 285 35.1
BcaB07g33807 Brassica carinata HOM05D000003 ORTHO05D027300 1.2e-32 144.8 187 42.2
BcaC04g21327 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-32 144.8 294 36.4
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 9.8e-32 141.7 305 33.8
BolC6t37172H Brassica oleracea HOM05D000496 ORTHO05D000411 1.7e-31 141.0 333 30.9
BcaC01g00511 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-31 139.4 185 37.8
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 4.1e-30 136.3 308 33.8
BcaB03g16045 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-29 133.3 297 33.3
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 3.5e-29 133.3 219 34.2
BolC4t26206H Brassica oleracea HOM05D021332 ORTHO05D016015 5.0e-28 129.4 179 43.0
BolC3t20758H Brassica oleracea HOM05D000003 ORTHO05D014990 1.9e-27 127.5 191 40.8
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 7.3e-27 125.6 304 32.6
BcaC04g21727 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-26 124.0 156 40.4
BolC3t21278H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-25 120.9 152 42.8
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-25 119.0 191 39.3
BraA06t25752Z Brassica rapa HOM05D000003 ORTHO05D014990 8.3e-23 112.1 218 34.4
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-22 109.8 188 38.8
BcaB07g32767 Brassica carinata HOM05D000003 ORTHO05D001498 9.2e-22 108.6 160 36.2
BcaB03g15249 Brassica carinata HOM05D000003 ORTHO05D016015 2.0e-21 107.5 204 39.2
BcaB08g35582 Brassica carinata HOM05D000003 ORTHO05D016015 3.5e-21 106.7 222 36.5
BcaB06g27718 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-20 105.1 223 33.2
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 1.7e-20 104.4 206 35.0
BraA07t29214Z Brassica rapa HOM05D000003 ORTHO05D027300 5.0e-20 102.8 209 35.4
BcaC01g00817 Brassica carinata HOM05D000003 ORTHO05D014990 6.6e-20 102.4 213 35.7
BcaC08g44974 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-19 101.7 211 35.1
Thhalv10028300m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.9e-19 100.9 201 34.3
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 3.3e-19 100.1 97 45.4
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 4.3e-19 99.8 293 30.4
BcaC09g49067 Brassica carinata HOM05D000003 ORTHO05D016015 7.3e-19 99.0 183 33.9
BcaC07g37288 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-19 98.6 120 42.5
BcaB07g33968 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-18 97.8 177 39.0
BcaB08g34742 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-18 96.3 95 46.3
BcaC05g28478 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-18 95.5 215 36.3
BolC9t55896H Brassica oleracea HOM05D000003 ORTHO05D027300 8.0e-18 95.5 225 32.9
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-17 94.7 202 34.7
BcaC06g36381 Brassica carinata HOM05D000003 ORTHO05D000006 2.3e-17 94.0 230 32.2
BcaB02g07030 Brassica carinata HOM05D000003 ORTHO05D015466 6.8e-17 92.4 228 32.0
BcaC03g14538 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-16 91.7 209 33.0
BcaC06g34830 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-16 91.7 222 33.8
BcaB01g00895 Brassica carinata HOM05D000003 ORTHO05D015466 2.6e-16 90.5 240 30.0
BcaC05g27635 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-16 89.7 212 34.9
BcaC09g48293 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-15 88.2 108 43.5
BcaB03g15502 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-15 87.0 105 41.0
BcaB06g26654 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-15 86.7 209 33.0
BcaB07g33683 Brassica carinata HOM05D000003 ORTHO05D000006 4.9e-15 86.3 209 32.5
BcaC05g28885 Brassica carinata HOM05D010131 ORTHO05D011793 4.1e-14 83.2 344 25.6
BcaB02g11485 Brassica carinata HOM05D000003 ORTHO05D011793 2.1e-13 80.9 188 31.9
BcaB03g15483 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-13 80.1 181 28.2
BcaC01g01228 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-13 79.7 107 40.2
BcaC06g30852 Brassica carinata HOM05D000003 ORTHO05D015466 4.6e-13 79.7 212 31.6
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 7.8e-13 79.0 186 33.9
BcaB06g26959 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-12 78.2 191 29.8
BcaC09g48325 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-12 78.2 292 26.0
BcaC02g11125 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-12 77.0 107 38.3
Thhalv10009818m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-11 75.1 249 26.1
BcaC08g45326 Brassica carinata HOM05D010131 ORTHO05D011793 1.9e-11 74.3 198 30.3
Sp5g32330 Schrenkiella parvula HOM05D000003 ORTHO05D014990 1.9e-11 74.3 103 35.9
BcaB01g03710 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-11 73.9 70 42.9
BcaB07g30505 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-11 73.6 77 44.2
BcaC06g35182 Brassica carinata HOM05D000496 ORTHO05D017591 4.3e-11 73.2 268 27.6
BcaB03g16371 Brassica carinata HOM05D000003 ORTHO05D015466 1.6e-10 71.2 201 28.4
AT5G36225 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 2.1e-10 70.9 105 35.2
BolC7t40581H Brassica oleracea HOM05D018006 ORTHO05D015466 2.1e-10 70.9 157 34.4
C07p01780 Brassica napus HOM05D018006 ORTHO05D015466 2.8e-10 70.5 157 34.4
Sp3g22020 Schrenkiella parvula HOM05D000003 ORTHO05D014990 4.7e-10 69.7 108 36.1
BcaB02g10097 Brassica carinata HOM05D000003 ORTHO05D001498 6.2e-10 69.3 204 27.5
BcaC09g49068 Brassica carinata HOM05D000496 ORTHO05D000411 8.1e-10 68.9 57 57.9
BcaC09g49291 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-09 68.6 188 27.1
BcaC08g43020 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-09 68.2 185 26.5
BraA03t15710Z Brassica rapa HOM05D000003 ORTHO05D014990 1.8e-09 67.8 61 50.8
BcaC05g27475 Brassica carinata HOM05D000496 ORTHO05D011507 2.3e-09 67.4 201 25.4
BraA01t02553Z Brassica rapa HOM05D000003 ORTHO05D014990 2.3e-09 67.4 78 43.6
BcaC06g36003 Brassica carinata HOM05D000496 ORTHO05D021714 3.1e-09 67.0 185 27.0
BcaC01g00202 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-09 66.6 198 25.8
BcaB07g33879 Brassica carinata HOM05D000003 ORTHO05D015466 5.2e-09 66.2 190 30.0
BcaC05g27187 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-09 65.9 188 24.5
BcaB06g25900 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-08 64.7 190 23.7
BcaC01g03351 Brassica carinata HOM05D010131 ORTHO05D011793 1.5e-08 64.7 157 31.8
BcaB01g02832 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-08 64.3 242 27.3
BcaC02g09438 Brassica carinata HOM05D000496 ORTHO05D018667 2.6e-08 63.9 288 24.7
Thhalv10003091m.g Eutrema salsugineum HOM05D000496 ORTHO05D011793 3.4e-08 63.5 166 28.9
Sp3g25180 Schrenkiella parvula HOM05D000003 ORTHO05D014990 4.4e-08 63.2 84 42.9
BolC1t03268H Brassica oleracea HOM05D000003 ORTHO05D014990 5.8e-08 62.8 97 37.1
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 7.5e-08 62.4 241 26.6
BcaB01g03263 Brassica carinata HOM05D000496 ORTHO05D000411 9.9e-08 62.0 203 25.6
BcaB06g29541 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 60.5 62 37.1
BcaC01g00782 Brassica carinata HOM05D000496 ORTHO05D011793 2.9e-07 60.5 196 27.0
A06p09140 Brassica napus HOM05D018006 ORTHO05D015466 3.7e-07 60.1 192 28.6
A08p06890 Brassica napus HOM05D000003 ORTHO05D027300 6.4e-07 59.3 98 33.7
BolC7t43106H Brassica oleracea HOM05D018006 ORTHO05D015466 6.4e-07 59.3 89 36.0
Sp7g10500 Schrenkiella parvula HOM05D000003 ORTHO05D016015 6.4e-07 59.3 70 44.3
BcaB01g00785 Brassica carinata HOM05D010131 ORTHO05D011793 1.4e-06 58.2 309 25.9
BcaB05g21700 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-06 57.4 296 24.0
BolC1t05055H Brassica oleracea HOM05D010131 ORTHO05D011793 5.4e-06 56.2 65 47.7
BolC3t19344H Brassica oleracea HOM05D010131 ORTHO05D011793 5.4e-06 56.2 90 38.9
BcaC07g39607 Brassica carinata HOM05D000003 ORTHO05D001498 7.1e-06 55.8 193 28.5


User provided reference genes

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