Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR152180 Cardamine hirsuta HOM05D000051 ORTHO05D015923 1.4e-87 326.2 165 100.0
CARHR177810 Cardamine hirsuta HOM05D000051 ORTHO05D015923 1.1e-68 263.5 165 84.2
AL4G21510 Arabidopsis lyrata HOM05D000051 ORTHO05D015923 1.5e-36 156.8 234 45.3
Carub.0008s0333 Capsella rubella HOM05D000051 ORTHO05D015923 5.6e-36 154.8 213 47.9
AT2G27505 Arabidopsis thaliana HOM05D000051 ORTHO05D015923 6.9e-34 147.9 193 48.2
Carub.0008s0313 Capsella rubella HOM05D000051 ORTHO05D015923 4.2e-31 138.7 197 48.2
Carub.0008s0332 Capsella rubella HOM05D000051 ORTHO05D015923 3.9e-29 132.1 170 53.5
A06p06490 Brassica napus HOM05D000051 ORTHO05D000015 5.6e-28 128.3 161 47.8
C05p07900 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-27 127.1 165 49.7
BolC5t29541H Brassica oleracea HOM05D000051 ORTHO05D000015 1.3e-27 127.1 165 49.7
BcaB07g30918 Brassica carinata HOM05D000051 ORTHO05D015923 1.6e-27 126.7 175 45.1
BraA06t23860Z Brassica rapa HOM05D000051 ORTHO05D000015 3.1e-26 122.5 162 46.9
A03p41070 Brassica napus HOM05D000051 ORTHO05D015923 4.0e-26 122.1 174 44.8
BraA03t13264Z Brassica rapa HOM05D000051 ORTHO05D015923 4.0e-26 122.1 174 44.8
C09p27340 Brassica napus HOM05D000051 ORTHO05D015923 7.1e-23 111.3 157 44.6
AL8G14510 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.6e-22 110.2 228 38.2
BcaC05g24847 Brassica carinata HOM05D000051 ORTHO05D000015 3.0e-21 105.9 101 56.4
AL8G14520 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.4e-18 96.3 97 56.7
BcaC06g34423 Brassica carinata HOM05D000051 ORTHO05D000015 7.6e-17 91.3 127 48.8
C07p28670 Brassica napus HOM05D000051 ORTHO05D000015 7.6e-17 91.3 127 48.0
BolC7t43405H Brassica oleracea HOM05D000051 ORTHO05D000015 7.6e-17 91.3 127 48.8
AL8G14470 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.2e-16 89.7 99 52.5
AT5G44940 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.2e-16 89.7 256 31.6
AT5G44950 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.4e-16 87.8 111 53.2
Carub.0008s0336 Capsella rubella HOM05D000051 ORTHO05D000015 1.1e-15 87.4 113 50.4
CARHR031350 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.9e-15 86.7 119 48.7
AT5G44970 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.2e-15 85.5 94 54.3
BcaC06g31538 Brassica carinata HOM05D000051 ORTHO05D000015 5.5e-15 85.1 123 47.2
Thhalv10001207m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.1e-15 84.7 271 30.3
BcaB03g15277 Brassica carinata HOM05D000051 ORTHO05D000015 2.1e-14 83.2 121 47.9
BcaB03g15278 Brassica carinata HOM05D000051 ORTHO05D000015 2.1e-14 83.2 121 47.9
CARHR031360 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.7e-14 82.8 163 40.5
Thhalv10001162m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.7e-14 82.8 96 50.0
Thhalv10001192m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.6e-14 82.0 159 38.4
CARHR177410 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.0e-14 81.6 140 38.6
CARHR177740 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.9e-14 81.3 99 48.5
AL8G14500 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-13 80.1 110 48.2
AL8G14530 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-13 80.1 108 48.1
CARHR177770 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-13 80.1 117 45.3
AL8G14480 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.3e-13 79.7 95 51.6
A09p21480 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-12 76.3 96 46.9
BcaB08g34327 Brassica carinata HOM05D000051 ORTHO05D000015 3.3e-12 75.9 103 43.7
CARHR177790 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.6e-12 75.1 259 29.0
CARHR177420 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.4e-12 74.7 124 43.5
Thhalv10000888m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.6e-12 74.3 91 52.7
CARHR178130 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.6e-11 73.6 109 44.0
BcaC08g46070 Brassica carinata HOM05D000051 ORTHO05D000015 2.8e-11 72.8 120 41.7
C06p39600 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-11 72.8 120 41.7
BolC6t39053H Brassica oleracea HOM05D000051 ORTHO05D000015 2.8e-11 72.8 120 41.7
Carub.0008s0335 Capsella rubella HOM05D000051 ORTHO05D000015 2.8e-11 72.8 98 45.9
CARHR257320 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.7e-11 72.4 98 45.9
A09p21460 Brassica napus HOM05D000022 ORTHO05D013684 4.8e-11 72.0 97 49.5
C08p46280 Brassica napus HOM05D000051 ORTHO05D000015 4.8e-11 72.0 100 42.0
BolC8t52177H Brassica oleracea HOM05D000051 ORTHO05D000015 4.8e-11 72.0 100 42.0
BraA09t37746Z Brassica rapa HOM05D000022 ORTHO05D013684 4.8e-11 72.0 97 49.5
AT1G13780 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.2e-11 71.6 114 42.1
A07p33260 Brassica napus HOM05D000051 ORTHO05D000015 6.2e-11 71.6 178 37.1
BolC9t55607H Brassica oleracea HOM05D000051 ORTHO05D000015 6.2e-11 71.6 116 43.1
Thhalv10001182m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.2e-11 71.6 137 42.3
AL1G25580 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.1e-11 71.2 143 35.7
BcaC04g21806 Brassica carinata HOM05D000022 ORTHO05D013684 8.1e-11 71.2 97 49.5
C09p27280 Brassica napus HOM05D000051 ORTHO05D000015 8.1e-11 71.2 97 49.5
BolC6t39051H Brassica oleracea HOM05D000051 ORTHO05D000015 8.1e-11 71.2 120 41.7
AL4G18170 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.1e-10 70.9 98 45.9
CARHR014170 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.1e-10 70.9 94 45.7
C02p45600 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-10 70.1 94 46.8
CARHR177760 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-10 70.1 95 48.4
CARHR178860 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-10 70.1 235 31.1
C06p39580 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-10 69.7 120 41.7
CARHR177780 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.4e-10 69.7 110 42.7
Sp2g09770 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.4e-10 69.7 150 36.7
AT2G26030 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.1e-10 69.3 116 44.0
AT5G44980 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.0e-10 68.9 167 35.3
BcaB07g30916 Brassica carinata HOM05D000051 ORTHO05D000015 4.0e-10 68.9 70 52.9
BcaB08g37456 Brassica carinata HOM05D000051 ORTHO05D000015 4.0e-10 68.9 102 42.2
BcaC07g41671 Brassica carinata HOM05D000051 ORTHO05D000015 4.0e-10 68.9 102 42.2
CARHR152170 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.0e-10 68.9 95 43.2
A07p33270 Brassica napus HOM05D000051 ORTHO05D000015 5.3e-10 68.6 120 40.8
BraA07t30957Z Brassica rapa HOM05D000051 ORTHO05D000015 6.9e-10 68.2 178 35.4
Sp5g21320 Schrenkiella parvula HOM05D000051 ORTHO05D000015 9.0e-10 67.8 85 48.2
A09p62740 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-09 67.0 101 40.6
BraA07t30958Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-09 67.0 120 40.8
BraA09t41638Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-09 67.0 101 40.6
CARHR178120 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.5e-09 67.0 114 42.1
CARHR221580 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.4e-09 65.9 142 35.9
A09p62770 Brassica napus HOM05D000051 ORTHO05D000015 5.8e-09 65.1 102 41.2
BraA09t41641Z Brassica rapa HOM05D000051 ORTHO05D000015 5.8e-09 65.1 102 41.2
Thhalv10007600m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.8e-09 65.1 103 41.7
A06p09830 Brassica napus HOM05D000051 ORTHO05D000015 7.6e-09 64.7 104 40.4
C09p27360 Brassica napus HOM05D000003 ORTHO05D000283 7.6e-09 64.7 232 27.6
BraA06t24173Z Brassica rapa HOM05D000051 ORTHO05D000015 7.6e-09 64.7 104 41.3
A09p63380 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-08 64.3 101 39.6
C07p27880 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-08 64.3 89 49.4
BraA09t41688Z Brassica rapa HOM05D000051 ORTHO05D000015 1.0e-08 64.3 101 39.6
A06p46820 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-08 63.9 69 47.8
CARHR094510 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.3e-08 63.9 104 43.3
BcaC06g34496 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-08 63.2 89 48.3
A09p62710 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-08 63.2 102 37.3
BolC7t43318H Brassica oleracea HOM05D000051 ORTHO05D000015 2.2e-08 63.2 89 48.3
BraA09t41636Z Brassica rapa HOM05D000051 ORTHO05D000015 2.2e-08 63.2 102 37.3
C05p11630 Brassica napus HOM05D000051 ORTHO05D000015 2.9e-08 62.8 102 41.2
BolC5t29909H Brassica oleracea HOM05D000051 ORTHO05D000015 2.9e-08 62.8 102 41.2
BcaB08g37454 Brassica carinata HOM05D000537 ORTHO05D000415 3.8e-08 62.4 101 37.6
BcaC07g41622 Brassica carinata HOM05D000537 ORTHO05D000415 3.8e-08 62.4 101 39.6
BraA06t24175Z Brassica rapa HOM05D000051 ORTHO05D000015 3.8e-08 62.4 101 42.6
CARHR180680 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.8e-08 62.4 84 44.0
BolC5t30229H Brassica oleracea HOM05D000051 ORTHO05D000015 4.9e-08 62.0 100 41.0
CARHR178140 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.9e-08 62.0 70 51.4
CARHR201930 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.9e-08 62.0 126 35.7
AL6G39170 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.5e-08 61.6 101 41.6
BcaB02g10549 Brassica carinata HOM05D000051 ORTHO05D000015 6.5e-08 61.6 102 37.3
BcaB08g34328 Brassica carinata HOM05D000537 ORTHO05D000415 6.5e-08 61.6 101 39.6
BcaC06g31579 Brassica carinata HOM05D000051 ORTHO05D000015 6.5e-08 61.6 69 46.4
BolC8t52221H Brassica oleracea HOM05D000051 ORTHO05D000015 6.5e-08 61.6 101 39.6
BraA06t27554Z Brassica rapa HOM05D000051 ORTHO05D000015 6.5e-08 61.6 90 43.3
A09p62750 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-07 60.8 101 38.6
C05p11640 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-07 60.8 106 38.7
BolC5t29911H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-07 60.8 106 38.7
BraA09t41639Z Brassica rapa HOM05D000051 ORTHO05D000015 1.1e-07 60.8 101 38.6
BraA09t41687Z Brassica rapa HOM05D000051 ORTHO05D000015 1.1e-07 60.8 102 40.2
A06p09880 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-07 60.5 106 40.6
BraA06t24176Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-07 60.5 106 40.6
Carub.0003s1893 Capsella rubella HOM05D000051 ORTHO05D000015 1.4e-07 60.5 98 41.8
BcaB08g37455 Brassica carinata HOM05D000051 ORTHO05D000015 1.9e-07 60.1 101 36.6
BcaC05g25285 Brassica carinata HOM05D000051 ORTHO05D000015 3.2e-07 59.3 102 41.2
C08p46820 Brassica napus HOM05D000051 ORTHO05D000015 3.2e-07 59.3 102 39.2
BolC8t52220H Brassica oleracea HOM05D000051 ORTHO05D000015 3.2e-07 59.3 102 38.2
A06p09870 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-07 58.9 101 42.6
BcaB02g06477 Brassica carinata HOM05D000051 ORTHO05D000015 7.1e-07 58.2 101 38.6
Thhalv10023168m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.1e-07 58.2 134 36.6
Aa31LG5G24210 Aethionema arabicum HOM05D000051 ORTHO05D000015 9.3e-07 57.8 91 42.9
A09p62720 Brassica napus HOM05D000051 ORTHO05D000015 9.3e-07 57.8 78 39.7
Carub.0008s1388 Capsella rubella HOM05D000051 ORTHO05D000015 1.2e-06 57.4 157 35.7
Carub.0008s1390 Capsella rubella HOM05D000051 ORTHO05D000015 1.2e-06 57.4 103 38.8
C05p15250 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-06 57.0 105 39.0
BcaC04g20426 Brassica carinata HOM05D000051 ORTHO05D000015 2.7e-06 56.2 191 30.4
C07p39100 Brassica napus HOM05D002050 ORTHO05D001949 4.6e-06 55.5 99 39.4
AL8G28900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.0e-06 55.1 94 38.3


User provided reference genes

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