Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR151070 Cardamine hirsuta HOM05D005635 ORTHO05D006838 9.5e-94 347.1 203 100.0
CARHR183720 Cardamine hirsuta HOM05D005635 ORTHO05D006838 8.4e-58 227.6 158 82.9
BolC6t37802H Brassica oleracea HOM05D005635 ORTHO05D006838 2.3e-47 193.0 240 57.5
Carub.0005s2649 Capsella rubella HOM05D005635 ORTHO05D006838 1.5e-46 190.3 271 50.9
AT3G59780 Arabidopsis thaliana HOM05D005635 ORTHO05D006838 2.5e-46 189.5 261 51.3
CARHR170120 Cardamine hirsuta HOM05D005635 ORTHO05D006838 1.4e-44 183.7 217 63.1
Sp5g03370 Schrenkiella parvula HOM05D005635 ORTHO05D006838 6.9e-44 181.4 267 48.7
BcaB02g07447 Brassica carinata HOM05D005635 ORTHO05D006838 1.2e-43 180.6 281 47.3
Aa31LG10G14030 Aethionema arabicum HOM05D005635 ORTHO05D006838 1.5e-43 180.3 236 51.3
AL5G41820 Arabidopsis lyrata HOM05D005635 ORTHO05D006838 6.4e-42 174.9 259 48.6
BraA07t30126Z Brassica rapa HOM05D005635 ORTHO05D006838 1.9e-41 173.3 199 58.3
Thhalv10005829m.g Eutrema salsugineum HOM05D005635 ORTHO05D006838 2.4e-41 172.9 236 55.9
BcaC08g45005 Brassica carinata HOM05D005635 ORTHO05D006838 4.6e-40 168.7 270 50.0
C06p26400 Brassica napus HOM05D005635 ORTHO05D006838 3.0e-39 166.0 270 49.6
THA.LOC104802334 Tarenaya hassleriana HOM05D005635 ORTHO05D006838 5.8e-35 151.8 220 47.7
Cpa.g.sc9.387 Carica papaya HOM05D005635 ORTHO05D006838 7.4e-30 134.8 222 41.4
A07p24820 Brassica napus HOM05D005635 ORTHO05D006838 1.3e-29 134.0 290 42.4
QL10p057166 Quercus lobata HOM05D005635 ORTHO05D006838 5.5e-25 118.6 186 42.5
QL10p057536 Quercus lobata HOM05D005635 ORTHO05D006838 5.5e-25 118.6 186 42.5
Cfa015678 Carpinus fangiana HOM05D005635 ORTHO05D006838 1.5e-22 110.5 228 35.5
Haze_00856 Corylus avellana HOM05D005635 ORTHO05D006838 8.2e-21 104.8 179 37.4
Atru.chr4.1471 Acer truncatum HOM05D005635 ORTHO05D006838 4.1e-20 102.4 221 37.1
Potri.013G128300 Populus trichocarpa HOM05D005635 ORTHO05D006838 4.1e-20 102.4 223 35.0
Peaxi162Scf00883g00320 Petunia axillaris HOM05D005635 ORTHO05D006838 5.9e-19 98.6 224 33.0
MD02G1004500 Malus domestica HOM05D005635 ORTHO05D006838 3.8e-18 95.9 190 34.2
Phvul.001G267200 Phaseolus vulgaris HOM05D005635 ORTHO05D006838 6.5e-18 95.1 194 36.6
MD15G1148200 Malus domestica HOM05D005635 ORTHO05D006838 1.9e-17 93.6 195 34.9
CANSAT56G0139 Cannabis sativa HOM05D005635 ORTHO05D006838 2.5e-17 93.2 211 32.7
VMungo1383G0014 Vigna mungo HOM05D005635 ORTHO05D006838 3.2e-17 92.8 199 33.7
Duzib151G1049 Durio zibethinus HOM05D005635 ORTHO05D006838 2.7e-16 89.7 227 40.1
TWI15G0946 Tripterygium wilfordii HOM05D005635 ORTHO05D006838 3.6e-16 89.4 218 39.0
CiPaw.01G169400 Carya illinoinensis HOM05D005635 ORTHO05D006838 7.9e-16 88.2 224 30.8
Nn7g37529 Nelumbo nucifera HOM05D005635 ORTHO05D006838 1.0e-15 87.8 155 38.7
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 3.0e-15 86.3 143 37.1
Potri.014G182410 Populus trichocarpa HOM05D005635 ORTHO05D006838 3.9e-15 85.9 132 40.9
Ca_16400_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 5.1e-15 85.5 180 36.1
Gohir.D09G212700 Gossypium hirsutum HOM05D005635 ORTHO05D006838 5.1e-15 85.5 147 40.1
Gorai.006G232500 Gossypium raimondii HOM05D005635 ORTHO05D006838 5.1e-15 85.5 147 40.1
GSVIVG01038182001 Vitis vinifera HOM05D005635 ORTHO05D006838 5.1e-15 85.5 197 38.6
arahy.Tifrunner.gnm1.ann1.KV01DF Arachis hypogaea HOM05D005635 ORTHO05D006838 2.5e-14 83.2 146 34.2
TAR362G0201 Trochodendron aralioides HOM05D005635 ORTHO05D006838 2.5e-14 83.2 175 33.7
Manes.05G131200 Manihot esculenta HOM05D005635 ORTHO05D006838 7.4e-14 81.6 194 38.1
arahy.Tifrunner.gnm1.ann1.0WSK8D Arachis hypogaea HOM05D005635 ORTHO05D006838 9.7e-14 81.3 146 34.2
CAN.G207.4 Capsicum annuum HOM05D005635 ORTHO05D006838 9.7e-14 81.3 196 33.2
Glyma.18G001800 Glycine max HOM05D005635 ORTHO05D006838 1.3e-13 80.9 221 35.7
AUR62002413 Chenopodium quinoa HOM05D005635 ORTHO05D006838 1.7e-13 80.5 227 28.6
Duzib212G0953 Durio zibethinus HOM05D005635 ORTHO05D006838 6.3e-13 78.6 228 32.5
Gohir.A10G145200 Gossypium hirsutum HOM05D005635 ORTHO05D006838 6.3e-13 78.6 81 53.1
Gohir.A09G213616 Gossypium hirsutum HOM05D005635 ORTHO05D006838 8.2e-13 78.2 147 38.1
Gohir.D10G121800 Gossypium hirsutum HOM05D005635 ORTHO05D006838 8.2e-13 78.2 81 53.1
Gorai.011G133900 Gossypium raimondii HOM05D005635 ORTHO05D006838 8.2e-13 78.2 81 53.1
Glyma.11G255300 Glycine max HOM05D005635 ORTHO05D006838 1.4e-12 77.4 220 35.0
DCAR_029617 Daucus carota HOM05D005635 ORTHO05D006838 3.1e-12 76.3 196 30.1
AUR62023776 Chenopodium quinoa HOM05D005635 ORTHO05D006838 4.1e-12 75.9 228 28.5
MBI07_g33481_MAGBIO Magnolia biondii HOM05D005635 ORTHO05D006838 1.5e-11 73.9 196 32.1
SGA_v2.0_scaffold66G22529 Striga asiatica HOM05D005635 ORTHO05D006838 4.5e-11 72.4 182 33.5
ATR0743G254 Amborella trichopoda HOM05D005635 ORTHO05D006838 1.0e-10 71.2 178 30.9
Aqoxy5G00015 Aquilegia oxysepala HOM05D005635 ORTHO05D006838 1.0e-10 71.2 215 28.8
EL10Ac3g06107 Beta vulgaris HOM05D005635 ORTHO05D006838 2.2e-10 70.1 231 26.0
Sopen03g013370 Solanum pennellii HOM05D005635 ORTHO05D006838 3.8e-10 69.3 195 34.9
CSS0001444 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 6.5e-10 68.6 184 32.6
Dinv18319 Davidia involucrata HOM05D005635 ORTHO05D006838 6.5e-10 68.6 177 35.0
Solyc03g059180.4 Solanum lycopersicum HOM05D005635 ORTHO05D006838 2.5e-09 66.6 195 34.4
vmacro00684 Vaccinium macrocarpon HOM05D005635 ORTHO05D006838 2.5e-09 66.6 169 31.4
Eucgr.L00011 Eucalyptus grandis HOM05D005635 ORTHO05D006838 3.2e-09 66.2 86 41.9
FAN23G1844 Fragaria x ananassa HOM05D005635 ORTHO05D006838 4.2e-09 65.9 213 31.5
Prupe.7G266600 Prunus persica HOM05D005635 ORTHO05D006838 7.2e-09 65.1 218 29.8
Lj6g0024009 Lotus japonicus HOM05D005635 ORTHO05D006838 9.4e-09 64.7 181 32.6
ClCG08G017200 Citrullus lanatus HOM05D005635 ORTHO05D006838 1.2e-08 64.3 187 36.4
Lj3C160T4 Lonicera japonica HOM05D005635 ORTHO05D006838 1.6e-08 63.9 188 35.1
Hund22526 Selenicereus undatus HOM05D005635 ORTHO05D006838 1.6e-08 63.9 178 28.1
PSO832G1829 Papaver somniferum HOM05D005635 ORTHO05D006838 2.1e-08 63.5 216 33.8
Rhsim09G0007900 Rhododendron simsii HOM05D005635 ORTHO05D006838 2.1e-08 63.5 81 44.4
RcHm_v2.0_Chr2g0085171 Rosa chinensis HOM05D005635 ORTHO05D006838 2.1e-08 63.5 81 42.0
Hma1.2p1_1156F.1_g262300 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 2.7e-08 63.2 75 44.0
Hma1.2p1_1156F.1_g262310 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 2.7e-08 63.2 75 44.0
Oeu017118.1 Olea europaea HOM05D005635 ORTHO05D006838 2.7e-08 63.2 193 30.1
MELO3C010738.2 Cucumis melo HOM05D005635 ORTHO05D006838 3.6e-08 62.8 199 36.2
Psat5g100720 Pisum sativum HOM05D005635 ORTHO05D006838 4.7e-08 62.4 83 42.2
Sc19g0006380 Simmondsia chinensis HOM05D005635 ORTHO05D006838 6.1e-08 62.0 78 41.0
Thecc.04G163300 Theobroma cacao HOM05D005635 ORTHO05D006838 7.9e-08 61.6 218 37.2
Sabra13G0107200 Salix brachista HOM05D005635 ORTHO05D006838 1.0e-07 61.2 231 28.6
TPR.G17194 Trifolium pratense HOM05D005635 ORTHO05D006838 1.4e-07 60.8 196 33.2
PGR042G2382 Punica granatum HOM05D005635 ORTHO05D006838 1.8e-07 60.5 75 44.0
Sed0015570 Sechium edule HOM05D005635 ORTHO05D006838 1.8e-07 60.5 221 33.9
Atru.chr4.1500 Acer truncatum HOM05D005635 ORTHO05D006838 2.3e-07 60.1 168 35.1
FvH4_1g00540 Fragaria vesca HOM05D005635 ORTHO05D006838 3.0e-07 59.7 81 40.7
CsaV3_2G025410 Cucumis sativus L. HOM05D005635 ORTHO05D006838 3.9e-07 59.3 208 35.1
FAN26G0446 Fragaria x ananassa HOM05D005635 ORTHO05D006838 5.1e-07 58.9 81 40.7
Migut.D00990 Erythranthe guttata HOM05D005635 ORTHO05D006838 8.8e-07 58.2 207 28.5
Ca_19887_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 1.5e-06 57.4 125 33.6
Lalb_Chr23g0278351 Lupinus albus HOM05D005635 ORTHO05D006838 1.5e-06 57.4 142 28.9
Sed0022147 Sechium edule HOM05D005635 ORTHO05D006838 1.5e-06 57.4 218 31.7
FAN28G2262 Fragaria x ananassa HOM05D005635 ORTHO05D006838 2.0e-06 57.0 57 47.4
PSO210G4833 Papaver somniferum HOM05D005635 ORTHO05D006838 2.0e-06 57.0 77 44.2
unitig_32.g10984 Utricularia gibba HOM05D005635 ORTHO05D006838 3.3e-06 56.2 136 33.1
Zm00001eb144770 Zea mays HOM05D005635 ORTHO05D006838 3.3e-06 56.2 73 43.8


User provided reference genes

Program Settings