Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR150690 Cardamine hirsuta HOM05D002385 ORTHO05D002245 3.2e-43 177.9 86 100.0
CARHR098140 Cardamine hirsuta HOM05D002385 ORTHO05D002245 2.0e-16 89.0 53 86.8
Carub.0224s0002 Capsella rubella HOM05D002385 ORTHO05D002245 5.4e-14 80.9 57 64.9
AT3G22240 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 8.6e-12 73.6 43 88.4
Carub.0224s0001 Capsella rubella HOM05D002385 ORTHO05D002245 1.1e-11 73.2 63 60.3
AL3G36500 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.9e-11 72.4 43 86.0
AT3G22235 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 2.5e-11 72.0 45 80.0
AT3G22231 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 4.2e-11 71.2 83 51.8
AL3G36460 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 3.6e-10 68.2 63 60.3
AL3G36480 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 4.7e-10 67.8 43 79.1
AL3G36490 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 8.0e-10 67.0 43 79.1
CARHR098150 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.0e-09 66.6 43 81.4
Carub.0003s2241 Capsella rubella HOM05D002385 ORTHO05D002245 2.3e-09 65.5 43 79.1
BcaB06g26327 Brassica carinata HOM05D002385 ORTHO05D002245 4.0e-09 64.7 46 71.7
Carub.0003s2240 Capsella rubella HOM05D002385 ORTHO05D002245 6.8e-09 63.9 78 51.3
Sp3g20030 Schrenkiella parvula HOM05D002385 ORTHO05D002245 2.0e-08 62.4 45 73.3
BcaC04g19478 Brassica carinata HOM05D002385 ORTHO05D002245 7.5e-08 60.5 46 69.6
BcaC04g19479 Brassica carinata HOM05D002385 ORTHO05D002245 7.5e-08 60.5 46 69.6
A10p19200 Brassica napus HOM05D002385 ORTHO05D002245 1.7e-07 59.3 73 50.7
BcaB08g37322 Brassica carinata HOM05D002385 ORTHO05D002245 2.8e-07 58.5 46 67.4
BcaB04g20534 Brassica carinata HOM05D002385 ORTHO05D002245 3.7e-07 58.2 42 73.8
C09p55310 Brassica napus HOM05D002385 ORTHO05D002245 4.9e-07 57.8 42 76.2
C09p55320 Brassica napus HOM05D002385 ORTHO05D002245 4.9e-07 57.8 42 76.2
BolC9t58392H Brassica oleracea HOM05D002385 ORTHO05D002245 4.9e-07 57.8 42 76.2
BolC9t58393H Brassica oleracea HOM05D002385 ORTHO05D033827 4.9e-07 57.8 42 76.2
BolC9t58394H Brassica oleracea HOM05D002385 ORTHO05D002245 4.9e-07 57.8 42 76.2
BraA10t43997Z Brassica rapa HOM05D002385 ORTHO05D002245 4.9e-07 57.8 42 76.2
BraA10t43998Z Brassica rapa HOM05D002385 ORTHO05D002245 6.3e-07 57.4 77 48.1
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 1.4e-06 56.2 43 65.1
BolC1t05607H Brassica oleracea HOM05D002385 ORTHO05D002245 1.8e-06 55.8 77 46.8
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 1.8e-06 55.8 35 80.0
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 1.8e-06 55.8 42 73.8
BcaC01g03458 Brassica carinata HOM05D002385 ORTHO05D002245 2.4e-06 55.5 49 69.4
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 4.1e-06 54.7 43 69.8
A01p32930 Brassica napus HOM05D002385 ORTHO05D002245 4.1e-06 54.7 42 71.4
BraA01t03414Z Brassica rapa HOM05D002385 ORTHO05D002245 4.1e-06 54.7 42 71.4
Aa31LG8G8820 Aethionema arabicum HOM05D002385 ORTHO05D002245 7.0e-06 53.9 50 60.0
C03p52250 Brassica napus HOM05D002385 ORTHO05D002245 7.0e-06 53.9 33 81.8
BolC3t17506H Brassica oleracea HOM05D002385 ORTHO05D002245 7.0e-06 53.9 33 81.8
C01p42010 Brassica napus HOM05D002385 ORTHO05D002245 9.2e-06 53.5 42 69.0


User provided reference genes

Program Settings