Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR150670 Cardamine hirsuta HOM05D008416 ORTHO05D010671 4.1e-59 231.1 111 100.0
AL5G23830 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.2e-29 133.3 101 64.4
AT3G45245 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 8.4e-28 127.1 101 60.4
AT3G45243 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 4.2e-27 124.8 90 63.3
Carub.0005s1105 Capsella rubella HOM05D008416 ORTHO05D010671 7.1e-27 124.0 91 64.8
AL5G23820 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 6.0e-26 120.9 89 60.7
Carub.0005s1104 Capsella rubella HOM05D008416 ORTHO05D010671 1.9e-24 115.9 91 63.7
Thhalv10003095m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 7.6e-21 104.0 93 54.8
AL7G52470 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.9e-16 89.4 90 50.0
Carub.0005s1109 Capsella rubella HOM05D008416 ORTHO05D010671 1.9e-16 89.4 99 47.5
Sp2g01720 Schrenkiella parvula HOM05D008416 ORTHO05D010671 2.2e-15 85.9 90 47.8
AT3G45285 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.8e-15 85.5 104 47.1
BolC6t35557H Brassica oleracea HOM05D008416 ORTHO05D010671 1.8e-14 82.8 107 40.2
Carub.0005s1108 Capsella rubella HOM05D008416 ORTHO05D010671 1.8e-14 82.8 101 46.5
CARHR150660 Cardamine hirsuta HOM05D008416 ORTHO05D010671 1.8e-14 82.8 82 50.0
CARHR150620 Cardamine hirsuta HOM05D008416 ORTHO05D010671 3.1e-14 82.0 90 47.8
Thhalv10003106m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 3.1e-14 82.0 90 42.2
AT3G45275 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 4.1e-14 81.6 90 50.0
C06p04270 Brassica napus HOM05D008416 ORTHO05D010671 4.1e-14 81.6 103 40.8
BolC6t35556H Brassica oleracea HOM05D008416 ORTHO05D010671 6.9e-14 80.9 101 40.6
BolC6t35552H Brassica oleracea HOM05D008416 ORTHO05D010671 9.0e-14 80.5 103 41.7
AT3G44428 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.2e-13 80.1 104 45.2
BraA06t23586Z Brassica rapa HOM05D008416 ORTHO05D010671 1.2e-13 80.1 101 41.6
Aa31LG4G14580 Aethionema arabicum HOM05D008416 ORTHO05D010671 1.5e-13 79.7 77 41.6
AT2G25312 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.5e-13 79.7 104 46.2
C06p04280 Brassica napus HOM05D008416 ORTHO05D010671 1.5e-13 79.7 103 41.7
BolC6t35558H Brassica oleracea HOM05D008416 ORTHO05D010671 1.5e-13 79.7 103 39.8
BolC6t35559H Brassica oleracea HOM05D008416 ORTHO05D010671 1.5e-13 79.7 103 41.7
AT3G45248 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.0e-13 79.3 104 41.3
AL5G23840 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 2.6e-13 79.0 105 41.9
BraA06t23587Z Brassica rapa HOM05D008416 ORTHO05D010671 2.6e-13 79.0 99 41.4
BolC6t35553H Brassica oleracea HOM05D008416 ORTHO05D010671 3.4e-13 78.6 107 38.3
BolC6t35554H Brassica oleracea HOM05D008416 ORTHO05D010671 3.4e-13 78.6 107 38.3
BolC6t35555H Brassica oleracea HOM05D008416 ORTHO05D010671 4.5e-13 78.2 105 38.1
C09p35150 Brassica napus HOM05D008416 ORTHO05D010671 7.6e-13 77.4 90 41.1
BolC9t56361H Brassica oleracea HOM05D008416 ORTHO05D010671 7.6e-13 77.4 90 41.1
A09p27720 Brassica napus HOM05D008416 ORTHO05D010671 1.7e-12 76.3 90 41.1
BraA09t38342Z Brassica rapa HOM05D008416 ORTHO05D010671 1.7e-12 76.3 90 41.1
BcaC02g10145 Brassica carinata HOM05D008416 ORTHO05D010671 2.2e-12 75.9 90 38.9
BolC3t14966H Brassica oleracea HOM05D008416 ORTHO05D010671 5.0e-12 74.7 94 38.3
BolC3t14967H Brassica oleracea HOM05D008416 ORTHO05D010671 5.0e-12 74.7 94 38.3
BraA06t23588Z Brassica rapa HOM05D008416 ORTHO05D010671 5.0e-12 74.7 94 38.3
Aa31LG4G14590 Aethionema arabicum HOM05D008416 ORTHO05D010671 8.5e-12 73.9 73 42.5
A06p03810 Brassica napus HOM05D008416 ORTHO05D010671 8.5e-12 73.9 89 41.6
CARHR179970 Cardamine hirsuta HOM05D008416 ORTHO05D010671 3.2e-11 72.0 89 38.2
Carub.0005s1110 Capsella rubella HOM05D008416 ORTHO05D010671 2.7e-10 68.9 76 38.2
AL5G23850 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 3.6e-10 68.6 91 42.9
AT3G45252 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.1e-08 63.5 91 38.5
Carub.0005s1111 Capsella rubella HOM05D008416 ORTHO05D010671 9.7e-08 60.5 51 51.0
Carub.0005s1185 Capsella rubella HOM05D008416 ORTHO05D010671 3.1e-06 55.5 88 33.0


User provided reference genes

Program Settings