Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR150620 Cardamine hirsuta HOM05D008416 ORTHO05D010671 4.9e-60 234.2 112 100.0
AT3G45275 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 6.3e-39 164.1 111 70.3
AT3G45285 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.5e-37 159.5 110 69.1
AL7G52470 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 2.6e-37 158.7 110 66.4
Sp2g01720 Schrenkiella parvula HOM05D008416 ORTHO05D010671 2.6e-37 158.7 106 67.0
C09p35150 Brassica napus HOM05D008416 ORTHO05D010671 7.2e-35 150.6 110 62.7
BolC9t56361H Brassica oleracea HOM05D008416 ORTHO05D010671 7.2e-35 150.6 110 62.7
AT2G25312 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 9.4e-35 150.2 105 65.7
A09p27720 Brassica napus HOM05D008416 ORTHO05D010671 2.1e-34 149.1 110 60.9
BraA09t38342Z Brassica rapa HOM05D008416 ORTHO05D010671 2.1e-34 149.1 110 60.9
AT3G44428 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.3e-33 145.6 110 63.6
Thhalv10003106m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 4.4e-32 141.4 110 58.2
CARHR179970 Cardamine hirsuta HOM05D008416 ORTHO05D010671 1.5e-29 132.9 112 54.5
C06p04280 Brassica napus HOM05D008416 ORTHO05D010671 1.3e-28 129.8 109 54.1
BolC3t14966H Brassica oleracea HOM05D008416 ORTHO05D010671 1.3e-28 129.8 110 52.7
BolC6t35559H Brassica oleracea HOM05D008416 ORTHO05D010671 1.3e-28 129.8 109 54.1
C06p04270 Brassica napus HOM05D008416 ORTHO05D010671 1.7e-28 129.4 109 53.2
BolC6t35553H Brassica oleracea HOM05D008416 ORTHO05D010671 1.7e-28 129.4 109 53.2
BolC6t35554H Brassica oleracea HOM05D008416 ORTHO05D010671 1.7e-28 129.4 109 53.2
BolC6t35556H Brassica oleracea HOM05D008416 ORTHO05D010671 1.7e-28 129.4 109 53.2
BraA06t23586Z Brassica rapa HOM05D008416 ORTHO05D010671 1.7e-28 129.4 110 52.7
BolC3t14967H Brassica oleracea HOM05D008416 ORTHO05D010671 2.9e-28 128.6 110 52.7
BolC6t35555H Brassica oleracea HOM05D008416 ORTHO05D010671 3.8e-28 128.3 109 53.2
BolC6t35558H Brassica oleracea HOM05D008416 ORTHO05D010671 3.8e-28 128.3 109 53.2
Aa31LG4G14580 Aethionema arabicum HOM05D008416 ORTHO05D010671 8.5e-28 127.1 75 70.7
BolC6t35552H Brassica oleracea HOM05D008416 ORTHO05D010671 4.2e-27 124.8 109 51.4
BolC6t35557H Brassica oleracea HOM05D008416 ORTHO05D010671 5.5e-27 124.4 108 51.9
BcaC02g10145 Brassica carinata HOM05D008416 ORTHO05D010671 3.6e-26 121.7 95 57.9
BraA06t23588Z Brassica rapa HOM05D008416 ORTHO05D010671 8.0e-26 120.6 110 48.2
AL5G23830 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.0e-25 120.2 113 52.2
Aa31LG4G14590 Aethionema arabicum HOM05D008416 ORTHO05D010671 3.0e-25 118.6 97 54.6
BraA06t23587Z Brassica rapa HOM05D008416 ORTHO05D010671 3.0e-25 118.6 98 53.1
AT3G45245 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.1e-24 116.7 108 51.9
A06p03810 Brassica napus HOM05D008416 ORTHO05D010671 2.6e-24 115.5 110 48.2
Carub.0005s1105 Capsella rubella HOM05D008416 ORTHO05D010671 5.7e-24 114.4 107 48.6
Carub.0005s1109 Capsella rubella HOM05D008416 ORTHO05D010671 4.8e-23 111.3 108 48.1
Carub.0005s1104 Capsella rubella HOM05D008416 ORTHO05D010671 4.1e-22 108.2 108 50.0
Thhalv10003095m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 5.3e-22 107.8 114 43.9
AT3G45248 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 4.5e-21 104.8 109 44.0
Carub.0005s1108 Capsella rubella HOM05D008416 ORTHO05D010671 1.3e-20 103.2 108 44.4
AL5G23840 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 6.5e-20 100.9 101 43.6
AL5G23820 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.5e-19 99.8 107 44.9
Carub.0005s1185 Capsella rubella HOM05D008416 ORTHO05D010671 3.2e-19 98.6 123 45.5
AT3G45243 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 9.4e-19 97.1 113 45.1
CARHR150660 Cardamine hirsuta HOM05D008416 ORTHO05D010671 2.7e-18 95.5 89 47.2
Carub.0005s1110 Capsella rubella HOM05D008416 ORTHO05D010671 3.0e-17 92.0 73 50.7
AT3G45252 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.5e-16 89.7 102 43.1
AL5G23850 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 5.7e-16 87.8 93 47.3
CARHR150670 Cardamine hirsuta HOM05D008416 ORTHO05D010671 6.3e-15 84.3 90 47.8
Carub.0005s1184 Capsella rubella HOM05D008416 ORTHO05D010671 1.8e-14 82.8 121 40.5
THA.LOC104816129 Tarenaya hassleriana HOM05D008416 ORTHO05D010671 3.1e-14 82.0 103 36.9
THA.LOC104817594 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 1.0e-12 77.0 112 29.5
Carub.0005s1111 Capsella rubella HOM05D008416 ORTHO05D010671 3.8e-12 75.1 60 50.0
THA.LOC104817591 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 3.6e-10 68.6 112 27.7
THA.LOC104817592 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 3.6e-10 68.6 112 27.7
Sp6g29040 Schrenkiella parvula HOM05D009469 ORTHO05D011620 3.1e-06 55.5 105 31.4
AL6G25820 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 7.0e-06 54.3 98 34.7


User provided reference genes

Program Settings