Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 9.9e-144 513.5 264 100.0
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 9.6e-131 470.3 268 91.4
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 2.8e-130 468.8 268 90.7
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 3.4e-128 461.8 268 89.2
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 8.4e-127 457.2 264 89.4
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.1e-126 456.8 265 87.9
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.1e-126 456.8 265 87.9
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 1.9e-126 456.1 264 89.4
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 2.5e-126 455.7 265 87.9
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 5.5e-126 454.5 268 87.7
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 1.2e-125 453.4 269 88.5
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 5.1e-124 448.0 270 87.4
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 9.7e-123 443.7 265 87.5
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 2.0e-120 436.0 269 83.6
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 1.1e-110 403.7 270 80.7
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 4.1e-105 385.2 227 88.1
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.1e-101 372.9 267 74.2
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.8e-100 369.8 270 74.4
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.7e-87 326.6 250 70.8
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 6.5e-87 324.7 240 72.5
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 8.5e-87 324.3 225 76.0
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 1.1e-86 323.9 276 67.0
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.1e-86 323.9 272 68.0
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 7.2e-86 321.2 232 74.6
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 9.4e-86 320.9 264 66.3
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.2e-85 320.5 214 79.4
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.6e-85 320.1 208 80.3
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 2.7e-85 319.3 232 74.6
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 3.6e-85 318.9 266 67.3
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 4.7e-85 318.5 247 70.9
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.7e-85 318.5 272 66.9
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 4.7e-85 318.5 232 75.4
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 6.1e-85 318.2 263 68.4
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.1e-85 318.2 272 66.9
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 6.1e-85 318.2 205 81.0
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 6.1e-85 318.2 213 77.5
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 2.3e-84 316.2 274 66.8
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 3.0e-84 315.8 253 68.8
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 3.0e-84 315.8 264 65.2
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.0e-84 315.5 267 65.2
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 4.0e-84 315.5 213 78.9
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 5.2e-84 315.1 198 83.3
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 6.8e-84 314.7 271 65.3
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 8.8e-84 314.3 250 69.6
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.2e-83 313.9 232 75.0
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.5e-83 313.5 198 82.8
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.5e-83 313.5 213 76.1
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.5e-83 313.5 267 65.5
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 2.0e-83 313.2 240 71.7
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 2.6e-83 312.8 238 70.6
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 2.6e-83 312.8 215 74.0
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 5.7e-83 311.6 197 80.2
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 5.7e-83 311.6 197 80.7
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 5.7e-83 311.6 269 65.4
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 7.5e-83 311.2 201 79.1
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 7.5e-83 311.2 214 76.6
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 7.5e-83 311.2 197 81.7
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 9.8e-83 310.8 214 76.6
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 9.8e-83 310.8 214 76.6
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 9.8e-83 310.8 265 65.7
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 9.8e-83 310.8 214 76.2
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 9.8e-83 310.8 233 73.8
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 2.2e-82 309.7 265 67.5
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 2.8e-82 309.3 231 72.3
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 2.8e-82 309.3 213 76.5
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 2.8e-82 309.3 269 65.1
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 6.3e-82 308.1 217 74.2
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 8.3e-82 307.8 270 65.6
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.1e-81 307.4 268 65.3
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.1e-81 307.4 185 85.4
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.1e-81 307.4 236 70.8
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.4e-81 307.0 216 74.5
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.8e-81 306.6 223 74.0
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.8e-81 306.6 231 71.0
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.8e-81 306.6 231 71.0
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.8e-81 306.6 258 65.9
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 2.4e-81 306.2 192 80.7
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.1e-81 305.4 197 78.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 4.1e-81 305.4 188 83.5
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 5.4e-81 305.1 204 77.9
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 5.4e-81 305.1 264 66.7
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.2e-80 303.9 187 82.4
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 5.9e-80 301.6 230 70.4
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 7.7e-80 301.2 276 62.3
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 7.7e-80 301.2 232 71.6
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 1.3e-79 300.4 195 79.5
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.3e-79 299.7 198 79.3
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 3.8e-79 298.9 188 81.9
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 6.6e-79 298.1 197 77.7
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 6.6e-79 298.1 193 80.8
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 8.6e-79 297.7 195 79.0
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.1e-78 297.4 266 63.5
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 6.1e-77 291.6 236 69.1
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.8e-76 290.0 188 79.3
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 1.8e-76 290.0 255 64.3
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 8.9e-76 287.7 201 76.6
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.7e-74 283.5 218 71.6
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 2.2e-74 283.1 185 77.8
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 6.4e-74 281.6 185 76.8
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.6e-70 268.5 263 59.7
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 8.0e-69 264.6 232 63.8
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 1.5e-67 260.4 233 59.2
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.9e-66 256.1 241 63.1
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 1.5e-62 243.8 192 64.1
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 1.2e-61 240.7 199 61.8
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.2e-59 234.2 197 59.9
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 4.1e-57 225.7 211 63.5
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 3.3e-54 216.1 140 80.0
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 2.9e-50 203.0 212 56.6
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 4.9e-50 202.2 126 82.5
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 6.2e-45 185.3 192 51.6
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.2e-43 181.0 108 83.3
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 9.9e-43 177.9 179 56.4
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 1.3e-42 177.6 129 71.3
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.7e-42 177.2 184 50.5
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 8.1e-37 158.3 108 67.6
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 9.3e-33 144.8 200 41.0
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 7.4e-30 135.2 151 55.0
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 7.4e-22 108.6 83 67.5
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 9.6e-22 108.2 71 81.7
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-17 94.7 93 62.4
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 2.5e-14 83.6 47 80.9
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 9.6e-14 81.6 45 93.3
BcaB01g05146 Brassica carinata HOM05D039718 ORTHO05D031954 1.4e-12 77.8 101 46.5
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 9.0e-12 75.1 65 66.2


User provided reference genes

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