Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR146890 Cardamine hirsuta HOM05D010264 ORTHO05D012423 3.3e-43 177.9 87 100.0
AL5G14560 Arabidopsis lyrata HOM05D010264 ORTHO05D012423 9.8e-32 139.8 91 79.1
AT3G25905 Arabidopsis thaliana HOM05D010264 ORTHO05D012423 4.1e-30 134.4 92 75.0
Carub.0005s0374 Capsella rubella HOM05D010264 ORTHO05D012423 1.4e-25 119.4 94 73.4
Thhalv10005195m.g Eutrema salsugineum HOM05D010264 ORTHO05D012423 1.2e-24 116.3 97 68.0
A02p34160 Brassica napus HOM05D010264 ORTHO05D012423 4.9e-23 110.9 97 63.9
BraA02t08431Z Brassica rapa HOM05D010264 ORTHO05D012423 4.9e-23 110.9 97 63.9
BolC2t11328H Brassica oleracea HOM05D010264 ORTHO05D012423 1.4e-22 109.4 97 62.9
C02p52520 Brassica napus HOM05D010264 ORTHO05D012423 4.1e-22 107.8 97 61.9
BcaB07g30248 Brassica carinata HOM05D010264 ORTHO05D012423 3.5e-21 104.8 98 61.2
BolC9t56061H Brassica oleracea HOM05D010264 ORTHO05D012423 5.1e-20 100.9 97 58.8
A06p42380 Brassica napus HOM05D010264 ORTHO05D012423 4.3e-19 97.8 97 59.8
BraA06t27153Z Brassica rapa HOM05D010264 ORTHO05D012423 4.3e-19 97.8 97 59.8
C07p34950 Brassica napus HOM05D010264 ORTHO05D012423 2.8e-18 95.1 97 59.8
BcaC03g17305 Brassica carinata HOM05D010264 ORTHO05D012423 3.6e-18 94.7 81 63.0
BcaC06g31105 Brassica carinata HOM05D010264 ORTHO05D012423 1.2e-16 89.7 81 61.7
BcaC04g21412 Brassica carinata HOM05D010264 ORTHO05D012423 4.4e-16 87.8 81 60.5
C09p32100 Brassica napus HOM05D010264 ORTHO05D012423 5.4e-14 80.9 73 60.3
BcaC06g33940 Brassica carinata HOM05D010264 ORTHO05D012423 1.6e-13 79.3 81 58.0
BolC7t44027H Brassica oleracea HOM05D010264 ORTHO05D012423 1.6e-13 79.3 81 58.0
THA.LOC109117083 Tarenaya hassleriana HOM05D010264 ORTHO05D012423 1.0e-12 76.6 97 51.5
Aa31LG2G6430 Aethionema arabicum HOM05D010264 ORTHO05D012423 2.3e-12 75.5 65 56.9
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 2.0e-08 62.4 91 44.0
Ciclev10017355m.g Citrus clementina HOM05D008112 ORTHO05D010225 5.8e-08 60.8 69 50.7
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 3.8e-07 58.2 101 39.6
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 3.2e-06 55.1 93 34.4
Glyma.20G115800 Glycine max HOM05D008112 ORTHO05D010225 4.2e-06 54.7 86 39.5
Glyma.10G274200 Glycine max HOM05D008112 ORTHO05D010225 5.4e-06 54.3 85 41.2
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 5.4e-06 54.3 76 44.7
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 5.4e-06 54.3 93 38.7
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 7.1e-06 53.9 83 39.8
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 9.3e-06 53.5 83 38.6


User provided reference genes

Program Settings