Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 5.8e-225 783.9 392 100.0
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 4.1e-210 734.6 392 89.5
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 1.2e-209 733.0 391 90.0
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 2.2e-208 728.8 393 90.1
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 2.0e-201 705.7 395 88.6
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 2.6e-201 705.3 392 89.8
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.0e-197 693.3 391 84.1
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 6.1e-182 641.0 409 79.0
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 8.8e-181 637.1 390 82.6
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 5.7e-180 634.4 390 82.3
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 1.8e-178 629.4 380 83.4
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 1.8e-178 629.4 395 76.7
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 2.0e-177 625.9 381 83.2
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 3.6e-166 588.6 389 74.6
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 1.9e-151 539.7 395 69.1
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 8.1e-150 534.3 389 68.6
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.1e-149 533.9 396 67.9
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 1.1e-149 533.9 395 69.6
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 4.4e-148 528.5 394 70.1
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 7.6e-148 527.7 397 65.0
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 2.9e-147 525.8 397 67.8
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 7.1e-146 521.2 394 65.2
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 9.2e-146 520.8 391 65.5
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.5e-145 518.8 393 63.9
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 7.8e-145 517.7 397 70.0
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 1.3e-144 516.9 394 67.3
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.5e-143 513.5 404 64.1
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 3.3e-143 512.3 394 64.0
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 5.6e-143 511.5 394 64.7
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 2.8e-142 509.2 396 63.6
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 6.2e-142 508.1 395 63.5
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 8.1e-142 507.7 395 63.5
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.1e-141 507.3 422 60.7
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.1e-141 507.3 370 65.9
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.1e-141 507.3 370 65.9
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.4e-141 506.1 393 66.9
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 5.2e-141 505.0 394 63.5
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 5.2e-141 505.0 396 64.4
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 8.9e-141 504.2 400 62.5
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 8.9e-141 504.2 396 64.1
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 1.2e-140 503.8 398 63.8
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.4e-140 502.3 399 62.2
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 3.4e-140 502.3 400 63.0
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 4.4e-140 501.9 399 62.7
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 9.9e-140 500.7 402 65.2
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.7e-139 500.0 390 64.1
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 1.1e-138 497.3 398 63.1
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 1.4e-138 496.9 394 61.7
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.4e-138 496.9 403 61.5
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.4e-138 496.9 398 62.3
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.4e-138 496.9 400 63.5
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 2.4e-138 496.1 384 63.3
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 5.4e-138 495.0 446 57.8
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 7.1e-138 494.6 396 68.2
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 9.3e-138 494.2 392 62.2
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 6.0e-137 491.5 405 65.4
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 1.3e-136 490.3 396 66.2
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.3e-136 489.6 395 62.3
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 3.0e-136 489.2 424 61.3
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 6.6e-136 488.0 395 61.0
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 8.7e-136 487.6 396 64.6
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.1e-135 487.3 394 63.2
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 1.5e-135 486.9 399 61.4
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 9.6e-135 484.2 395 61.0
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 1.3e-134 483.8 404 64.1
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.3e-134 483.8 395 65.6
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 2.0e-132 476.5 396 61.9
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 2.6e-132 476.1 395 60.5
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 3.4e-132 475.7 395 64.6
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 3.8e-131 472.2 399 61.7
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 8.4e-131 471.1 390 60.3
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 1.4e-130 470.3 393 64.6
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.9e-130 469.9 399 63.4
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 4.2e-130 468.8 394 59.4
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 9.3e-130 467.6 395 58.5
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.2e-129 467.2 394 59.4
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 2.7e-129 466.1 344 65.4
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 6.0e-129 464.9 397 61.7
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 6.0e-129 464.9 394 59.6
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 7.9e-129 464.5 396 64.9
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.0e-128 464.2 394 61.4
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.0e-128 464.2 394 59.1
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 1.5e-127 460.3 372 65.1
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 7.4e-127 458.0 375 63.2
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 3.6e-126 455.7 328 66.8
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 3.1e-125 452.6 385 59.0
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 4.0e-125 452.2 445 54.6
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 4.9e-123 445.3 355 61.7
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.4e-122 443.7 392 57.9
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 4.6e-121 438.7 274 77.4
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.8e-120 436.8 394 57.6
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.5e-119 433.7 429 56.2
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.3e-118 430.6 388 56.2
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 5.3e-117 425.2 426 56.1
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 6.9e-117 424.9 391 53.7
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 9.0e-117 424.5 371 60.1
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 6.5e-115 418.3 395 55.7
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 1.9e-114 416.8 392 56.9
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 7.9e-113 411.4 343 64.4
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 8.7e-112 407.9 344 58.4
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 5.7e-111 405.2 404 53.7
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.8e-109 400.2 394 54.8
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.8e-109 400.2 398 53.3
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.5e-108 397.1 394 54.6
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.7e-107 393.7 394 53.0
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 3.0e-104 382.9 293 67.9
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.6e-102 377.1 302 61.9
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 1.3e-99 367.5 272 69.9
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 1.1e-98 364.4 386 50.3
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 8.2e-86 321.6 221 69.2
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.0e-84 317.0 381 48.3
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 7.7e-84 315.1 385 49.1
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 3.0e-80 303.1 347 49.9
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 1.4e-72 277.7 381 41.2
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 4.0e-72 276.2 257 57.6
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 5.0e-67 259.2 198 61.6
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 9.5e-66 255.0 298 45.6
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.7e-54 217.6 207 50.7
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.2e-54 217.2 318 41.2
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 5.6e-50 202.6 236 42.8
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.1e-48 198.4 178 61.2
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 4.4e-47 193.0 212 52.8
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 3.7e-46 189.9 126 74.6
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.4e-45 187.2 153 59.5
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 3.6e-41 173.3 138 64.5
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 3.7e-38 163.3 348 33.3
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 2.8e-33 147.1 328 31.7
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 9.9e-31 138.7 377 30.8
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 2.1e-17 94.4 179 34.6
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.4e-16 91.7 66 66.7
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 1.8e-16 91.3 137 35.8
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-11 75.1 137 33.6
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-11 72.8 69 44.9
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 2.6e-07 60.8 68 47.1


User provided reference genes

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