Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 2.5e-65 252.7 205 100.0
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.3e-53 213.8 205 90.7
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 6.9e-52 208.0 205 80.5
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 2.6e-51 206.1 205 87.8
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 3.8e-50 202.2 205 77.1
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 1.4e-49 200.3 205 86.8
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 5.5e-49 198.4 205 74.1
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.2e-48 197.2 107 93.5
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.6e-48 196.8 205 76.1
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 2.7e-48 196.1 107 92.5
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 4.6e-48 195.3 205 71.7
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 6.1e-48 194.9 206 74.3
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 3.0e-47 192.6 205 73.2
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 3.0e-47 192.6 206 73.8
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 1.1e-46 190.7 106 90.6
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 2.8e-45 186.0 109 88.1
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 2.8e-45 186.0 109 88.1
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 2.8e-45 186.0 109 88.1
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.4e-44 183.7 205 79.0
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.8e-44 183.3 106 85.8
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 6.9e-44 181.4 110 87.3
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 6.9e-44 181.4 110 87.3
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 6.9e-44 181.4 205 77.1
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 5.9e-43 178.3 206 77.7
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.0e-42 177.6 205 64.9
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 1.3e-42 177.2 107 82.2
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.3e-42 177.2 205 76.1
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 1.7e-42 176.8 105 81.9
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 1.7e-42 176.8 105 81.9
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 2.2e-42 176.4 106 82.1
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 2.2e-42 176.4 205 72.2
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 2.9e-42 176.0 107 81.3
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 2.9e-42 176.0 107 81.3
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 3.8e-42 175.6 205 71.2
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 3.8e-42 175.6 205 80.0
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 3.8e-42 175.6 205 80.0
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 3.8e-42 175.6 205 63.9
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 5.0e-42 175.3 107 80.4
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 5.0e-42 175.3 205 73.7
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 6.5e-42 174.9 205 72.7
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 6.5e-42 174.9 105 81.9
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 8.5e-42 174.5 107 80.4
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 8.5e-42 174.5 107 80.4
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 8.5e-42 174.5 106 81.1
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 8.5e-42 174.5 107 80.4
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 1.1e-41 174.1 106 80.2
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 1.1e-41 174.1 205 65.4
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 1.1e-41 174.1 106 80.2
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.1e-41 174.1 106 80.2
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.1e-41 174.1 106 80.2
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.1e-41 174.1 105 80.0
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.1e-41 174.1 105 80.0
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 1.4e-41 173.7 107 79.4
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 2.5e-41 172.9 206 74.8
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 3.2e-41 172.6 106 80.2
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 3.2e-41 172.6 106 79.2
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 4.2e-41 172.2 205 63.4
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 5.5e-41 171.8 205 71.2
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 5.5e-41 171.8 103 81.6
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 5.5e-41 171.8 205 72.2
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 9.4e-41 171.0 107 76.6
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 1.2e-40 170.6 106 80.2
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 1.2e-40 170.6 106 79.2
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 1.2e-40 170.6 205 70.7
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 1.2e-40 170.6 106 80.2
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 1.6e-40 170.2 205 74.1
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 1.6e-40 170.2 103 80.6
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 2.1e-40 169.9 225 67.6
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 2.1e-40 169.9 106 78.3
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 2.7e-40 169.5 106 78.3
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 2.7e-40 169.5 106 78.3
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 3.6e-40 169.1 107 78.5
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 3.6e-40 169.1 102 80.4
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 3.6e-40 169.1 106 77.4
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 3.6e-40 169.1 106 78.3
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 4.7e-40 168.7 102 80.4
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 4.7e-40 168.7 107 76.6
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 6.1e-40 168.3 103 79.6
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 7.9e-40 167.9 205 70.2
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 1.0e-39 167.5 105 77.1
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 1.4e-39 167.2 106 76.4
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 1.4e-39 167.2 105 76.2
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 1.4e-39 167.2 106 76.4
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 1.4e-39 167.2 207 72.9
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 1.8e-39 166.8 106 76.4
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 1.8e-39 166.8 113 75.2
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 2.3e-39 166.4 205 77.6
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 2.3e-39 166.4 108 77.8
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 2.3e-39 166.4 108 77.8
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 2.3e-39 166.4 106 76.4
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 2.3e-39 166.4 107 74.8
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 5.2e-39 165.2 107 76.6
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 6.7e-39 164.9 207 65.2
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 6.7e-39 164.9 107 78.5
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 8.8e-39 164.5 101 79.2
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 8.8e-39 164.5 101 79.2
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 8.8e-39 164.5 106 76.4
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 1.1e-38 164.1 207 74.4
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 2.0e-38 163.3 106 74.5
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 2.0e-38 163.3 107 77.6
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 2.6e-38 162.9 106 78.3
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 2.6e-38 162.9 103 75.7
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 4.4e-38 162.2 103 75.7
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 4.4e-38 162.2 103 75.7
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 4.4e-38 162.2 103 75.7
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 5.7e-38 161.8 101 78.2
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 5.7e-38 161.8 106 77.4
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 7.4e-38 161.4 103 77.7
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 1.3e-37 160.6 205 77.6
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 4.8e-37 158.7 109 73.4
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 4.8e-37 158.7 109 73.4
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.4e-36 157.1 98 78.6
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 1.8e-36 156.8 105 76.2
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 2.0e-35 153.3 133 63.2
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 2.9e-34 149.4 130 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 2.5e-33 146.4 109 67.0
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 9.4e-33 144.4 109 66.1
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 6.1e-32 141.7 106 68.9
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.5e-30 137.1 167 76.6
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 1.5e-30 137.1 102 67.6
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 1.5e-30 137.1 164 48.2
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 2.0e-30 136.7 78 88.5
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 3.3e-30 136.0 77 88.3
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 5.7e-30 135.2 184 46.2
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 8.2e-29 131.3 78 83.3
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 5.3e-28 128.6 77 83.1
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 7.0e-28 128.3 191 41.9
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 3.5e-27 125.9 79 75.9
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 1.0e-26 124.4 77 80.5
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 7.2e-25 118.2 120 57.5
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 9.4e-25 117.9 77 83.1
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 6.1e-24 115.2 225 35.6
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 8.0e-24 114.8 161 57.1
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.4e-23 114.0 71 74.6
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 7.5e-22 108.2 65 81.5
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 7.5e-22 108.2 65 81.5
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 4.8e-21 105.5 176 41.5
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 4.8e-21 105.5 176 41.5
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 4.8e-21 105.5 83 65.1
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 3.1e-20 102.8 82 69.5
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 3.5e-19 99.4 78 70.5
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 5.0e-18 95.5 229 55.5
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 1.1e-17 94.4 74 62.2
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 1.2e-16 90.9 102 50.0
ClCG08G000030 Citrullus lanatus HOM05D004131 ORTHO05D004778 6.1e-16 88.6 107 52.3
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 8.0e-16 88.2 70 65.7
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 3.0e-15 86.3 139 75.5
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 2.6e-14 83.2 252 44.8
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 5.7e-14 82.0 46 93.5
BcaB02g07200 Brassica carinata HOM05D004131 ORTHO05D004778 2.4e-12 76.6 143 61.5
BcaB05g25112 Brassica carinata HOM05D004131 ORTHO05D004778 3.5e-11 72.8 144 61.8
BcaB05g25107 Brassica carinata HOM05D004131 ORTHO05D004778 7.8e-11 71.6 144 58.3
QL10p059329 Quercus lobata HOM05D004131 ORTHO05D004778 1.3e-10 70.9 141 75.9
BcaB02g07199 Brassica carinata HOM05D004131 ORTHO05D004778 8.6e-10 68.2 41 85.4
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 1.5e-09 67.4 43 76.7
Thecc.04G162100 Theobroma cacao HOM05D004131 ORTHO05D004778 2.5e-09 66.6 43 79.1
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 4.3e-09 65.9 34 85.3
BcaNung06582 Brassica carinata HOM05D004131 ORTHO05D004778 1.2e-08 64.3 48 72.9
BcaB05g25109 Brassica carinata HOM05D004131 ORTHO05D004778 8.0e-08 61.6 45 77.8
BcaB05g25118 Brassica carinata HOM05D004131 ORTHO05D004778 8.0e-08 61.6 45 77.8
BcaB05g25110 Brassica carinata HOM05D004131 ORTHO05D004778 2.3e-07 60.1 45 75.6
BcaB05g25113 Brassica carinata HOM05D004131 ORTHO05D004778 2.3e-07 60.1 45 75.6
Lju470A13T22 Lonicera japonica HOM05D004131 ORTHO05D004778 2.3e-07 60.1 43 72.1
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 3.0e-07 59.7 88 43.2
BcaB05g25117 Brassica carinata HOM05D004131 ORTHO05D004778 3.0e-07 59.7 45 75.6
A09p52080 Brassica napus HOM05D004131 ORTHO05D004778 4.4e-06 55.8 31 83.9


User provided reference genes

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