Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.2e-49 198.0 91 100.0
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.9e-42 174.1 91 89.0
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 4.9e-42 174.1 91 90.1
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.4e-41 172.6 91 87.9
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 5.4e-41 170.6 91 85.7
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 7.9e-40 166.8 91 86.8
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 1.0e-39 166.4 87 85.1
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.5e-38 162.5 88 81.8
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 5.6e-38 160.6 88 81.8
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 2.8e-37 158.3 88 79.5
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 2.8e-37 158.3 88 79.5
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 4.0e-36 154.5 88 77.3
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 4.0e-36 154.5 88 77.3
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 4.0e-36 154.5 88 77.3
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.0e-35 152.1 87 78.2
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-33 146.0 93 75.3
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.6e-32 142.5 90 72.2
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 3.9e-31 137.9 89 70.8
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.9e-31 137.9 91 69.2
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 6.7e-31 137.1 90 66.7
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-30 136.0 90 71.1
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-30 134.8 91 65.9
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-30 134.8 90 65.6
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 9.6e-30 133.3 91 68.1
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.6e-29 132.5 91 68.1
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 2.8e-29 131.7 87 65.5
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 4.8e-29 131.0 93 62.4
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 4.8e-29 131.0 93 62.4
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 4.8e-29 131.0 93 62.4
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 6.2e-29 130.6 90 67.8
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 6.2e-29 130.6 90 67.8
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 8.2e-29 130.2 93 68.8
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 1.8e-28 129.0 89 60.7
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 1.8e-28 129.0 89 60.7
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 1.8e-28 129.0 89 60.7
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 2.4e-28 128.6 93 67.7
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 2.4e-28 128.6 93 67.7
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-27 126.3 89 65.2
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-27 126.3 89 65.2
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-27 125.9 67 76.1
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 1.5e-27 125.9 93 64.5
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.5e-27 125.9 95 60.0
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 2.0e-27 125.6 82 69.5
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.0e-27 125.6 66 74.2
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 2.6e-27 125.2 93 62.4
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 3.4e-27 124.8 65 76.9
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 3.4e-27 124.8 93 64.5
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 3.4e-27 124.8 93 64.5
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.8e-27 124.0 90 64.4
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-26 123.2 65 75.4
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 1.0e-26 123.2 89 64.0
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.3e-26 122.9 94 62.8
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-26 122.9 93 64.5
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-26 122.5 90 63.3
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 1.7e-26 122.5 85 64.7
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.2e-26 122.1 91 67.0
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.9e-26 121.7 90 65.6
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.9e-26 120.9 90 63.3
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 4.9e-26 120.9 89 62.9
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 6.5e-26 120.6 90 63.3
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 6.5e-26 120.6 91 62.6
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 8.4e-26 120.2 94 61.7
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.1e-25 119.8 88 65.9
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.4e-25 119.4 90 63.3
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.9e-25 119.0 92 63.0
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 2.5e-25 118.6 89 61.8
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 7.1e-25 117.1 71 64.8
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-24 116.3 91 59.3
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.6e-24 115.9 95 61.1
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 2.7e-24 115.2 91 59.3
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 3.0e-23 111.7 92 60.9
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 5.1e-23 110.9 65 67.7
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.1e-22 109.8 88 61.4
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 4.3e-22 107.8 89 53.9
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.8e-21 105.1 93 53.8
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.1e-20 101.7 96 51.0
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 2.6e-19 98.6 69 69.6
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 1.7e-18 95.9 77 57.1
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 1.4e-17 92.8 88 54.5
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 2.5e-17 92.0 89 52.8
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 9.3e-17 90.1 86 48.8
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.6e-16 89.4 88 52.3
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 4.6e-16 87.8 88 51.1
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 6.1e-16 87.4 88 51.1
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 6.1e-16 87.4 88 53.4
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 6.1e-16 87.4 89 49.4
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 6.1e-16 87.4 86 47.7
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 1.4e-15 86.3 88 48.9
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 1.4e-15 86.3 88 50.0
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 1.4e-15 86.3 88 50.0
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 1.8e-15 85.9 88 48.9
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 1.8e-15 85.9 88 48.9
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.3e-15 85.5 92 48.9
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.1e-14 83.2 88 47.7
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 9.7e-14 80.1 87 51.7
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 1.7e-13 79.3 92 47.8
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 1.7e-13 79.3 92 47.8
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 1.1e-12 76.6 93 45.2
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 3.1e-12 75.1 85 47.1
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 3.1e-12 75.1 93 41.9
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 1.2e-11 73.2 91 44.0
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 2.6e-11 72.0 91 42.9
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 3.4e-11 71.6 85 44.7
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 5.9e-11 70.9 89 46.1
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 3.8e-10 68.2 90 44.4


User provided reference genes

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