Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR138360 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.1e-26 122.5 57 100.0
AL4G41950 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 4.5e-17 90.5 54 72.2
AT2G43270 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 5.5e-15 83.6 57 68.4
BcaB03g14061 Brassica carinata HOM05D005941 ORTHO05D007879 6.1e-14 80.1 57 63.2
BcaB03g14064 Brassica carinata HOM05D005941 ORTHO05D007879 6.1e-14 80.1 57 63.2
BraA07t29061Z Brassica rapa HOM05D005941 ORTHO05D007879 6.1e-14 80.1 57 64.9
BcaC06g35147 Brassica carinata HOM05D005941 ORTHO05D007879 7.9e-14 79.7 57 64.9
BcaC06g35151 Brassica carinata HOM05D005941 ORTHO05D007879 7.9e-14 79.7 57 64.9
BcaC06g35173 Brassica carinata HOM05D005941 ORTHO05D007879 7.9e-14 79.7 57 64.9
C07p19050 Brassica napus HOM05D005941 ORTHO05D007879 7.9e-14 79.7 57 64.9
C07p19310 Brassica napus HOM05D005941 ORTHO05D007879 7.9e-14 79.7 56 66.1
BolC7t42414H Brassica oleracea HOM05D005941 ORTHO05D007879 7.9e-14 79.7 57 64.9
BolC7t42451H Brassica oleracea HOM05D005941 ORTHO05D007879 7.9e-14 79.7 57 64.9
BcaB03g14065 Brassica carinata HOM05D005941 ORTHO05D007879 1.9e-12 75.1 54 64.8
AL4G37620 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 4.3e-12 73.9 59 59.3
AT1G49790 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 2.2e-11 71.6 57 52.6
C04p62360 Brassica napus HOM05D005941 ORTHO05D007879 2.2e-11 71.6 58 55.2
BraA04t18033Z Brassica rapa HOM05D005941 ORTHO05D007879 2.8e-11 71.2 58 56.9
BcaB06g28634 Brassica carinata HOM05D005941 ORTHO05D007879 8.2e-11 69.7 57 56.1
Thhalv10016886m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 5.3e-10 67.0 59 61.0
A04p25300 Brassica napus HOM05D005941 ORTHO05D007879 2.6e-09 64.7 57 50.9
BcaB02g10128 Brassica carinata HOM05D005941 ORTHO05D007879 4.5e-09 63.9 55 52.7
Carub.0005s2945 Capsella rubella HOM05D005941 ORTHO05D007879 4.5e-09 63.9 56 58.9
AL4G36610 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 7.7e-09 63.2 56 53.6
A03p07450 Brassica napus HOM05D005941 ORTHO05D007879 5.0e-08 60.5 58 50.0
BraA03t10074Z Brassica rapa HOM05D005941 ORTHO05D007879 5.0e-08 60.5 58 50.0
C03p08500 Brassica napus HOM05D005941 ORTHO05D007879 6.5e-08 60.1 58 50.0
BolC3t13355H Brassica oleracea HOM05D005941 ORTHO05D007879 6.5e-08 60.1 58 50.0
A06p37200 Brassica napus HOM05D005941 ORTHO05D007879 4.2e-07 57.4 51 62.7
BcaNung04033 Brassica carinata HOM05D005941 ORTHO05D007879 5.5e-07 57.0 64 51.6
BraA06t26643Z Brassica rapa HOM05D005941 ORTHO05D007879 1.6e-06 55.5 51 60.8
A03p50720 Brassica napus HOM05D005941 ORTHO05D007879 2.7e-06 54.7 64 51.6
BcaC05g24772 Brassica carinata HOM05D005941 ORTHO05D007879 3.6e-06 54.3 61 52.5
A07p12860 Brassica napus HOM05D005941 ORTHO05D007879 3.6e-06 54.3 29 69.0
BolC5t29472H Brassica oleracea HOM05D005941 ORTHO05D007879 3.6e-06 54.3 61 52.5
BraA03t14163Z Brassica rapa HOM05D005941 ORTHO05D007879 3.6e-06 54.3 64 51.6
AL4G41930 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 7.9e-06 53.1 65 50.8


User provided reference genes

Program Settings