Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.2e-51 206.5 117 100.0
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 1.6e-40 169.5 116 79.3
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 2.0e-40 169.1 123 72.4
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 4.5e-40 167.9 118 86.4
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 4.5e-40 167.9 118 81.4
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.5e-38 162.2 117 77.8
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 7.2e-38 160.6 119 83.2
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 2.8e-34 148.7 119 70.6
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 3.5e-32 141.7 128 67.2
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 4.5e-32 141.4 117 68.4
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 4.5e-32 141.4 117 68.4
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 1.7e-31 139.4 122 67.2
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 1.7e-31 139.4 122 67.2
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 4.0e-28 128.3 119 63.9
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 5.2e-28 127.9 118 59.3
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 5.2e-28 127.9 120 62.5
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.2e-27 126.7 119 62.2
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 1.2e-27 126.7 119 62.2
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 1.5e-27 126.3 119 62.2
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 2.0e-27 125.9 118 61.9
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 2.0e-27 125.9 122 63.9
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 2.6e-27 125.6 120 58.3
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 3.4e-27 125.2 120 61.7
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 5.8e-27 124.4 118 58.5
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 7.5e-27 124.0 128 57.0
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 1.3e-26 123.2 118 61.9
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 4.9e-26 121.3 119 62.2
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 6.4e-26 120.9 118 61.0
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 8.3e-26 120.6 124 59.7
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 1.4e-25 119.8 117 60.7
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 2.4e-25 119.0 127 59.8
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 2.4e-25 119.0 129 58.1
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 3.2e-25 118.6 118 57.6
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 5.4e-25 117.9 124 59.7
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 5.4e-25 117.9 118 60.2
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 5.4e-25 117.9 118 58.5
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 7.0e-25 117.5 118 59.3
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 7.0e-25 117.5 129 58.9
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 7.0e-25 117.5 124 58.1
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 9.2e-25 117.1 119 59.7
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 9.2e-25 117.1 117 61.5
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 9.2e-25 117.1 118 56.8
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 1.2e-24 116.7 125 60.0
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 1.2e-24 116.7 118 56.8
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 6.0e-24 114.4 128 57.8
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 6.0e-24 114.4 115 58.3
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 6.0e-24 114.4 123 56.9
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 7.8e-24 114.0 139 56.8
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 1.3e-23 113.2 118 58.5
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 1.7e-23 112.8 122 59.8
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 1.7e-23 112.8 121 54.5
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 3.0e-23 112.1 135 55.6
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 3.9e-23 111.7 130 56.2
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 1.1e-22 110.2 122 59.8
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 1.1e-22 110.2 129 54.3
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 1.1e-22 110.2 129 50.4
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 1.5e-22 109.8 130 55.4
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 2.5e-22 109.0 123 59.3
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 2.5e-22 109.0 131 58.8
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 2.5e-22 109.0 125 56.0
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 3.3e-22 108.6 130 56.2
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.3e-22 108.6 118 59.3
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 4.3e-22 108.2 125 56.0
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 4.3e-22 108.2 120 60.0
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 4.3e-22 108.2 118 52.5
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 9.5e-22 107.1 121 62.0
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 1.2e-21 106.7 125 59.2
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.6e-21 106.3 127 53.5
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 1.6e-21 106.3 130 58.5
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 2.1e-21 105.9 131 55.0
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 2.1e-21 105.9 127 55.1
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 2.8e-21 105.5 119 60.5
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 3.6e-21 105.1 122 59.0
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 3.6e-21 105.1 126 57.9
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 3.6e-21 105.1 137 54.0
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 8.0e-21 104.0 123 56.9
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 8.0e-21 104.0 121 57.9
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.3e-20 102.4 131 54.2
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.3e-20 102.4 54 90.7
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 5.2e-20 101.3 128 57.0
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 6.8e-20 100.9 129 53.5
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.2e-19 100.1 119 58.0
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 3.4e-19 98.6 126 52.4
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 5.8e-19 97.8 126 55.6
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 2.9e-18 95.5 119 51.3
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 8.3e-18 94.0 119 50.4
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 8.3e-18 94.0 112 50.9
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 8.3e-18 94.0 108 55.6
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 3.2e-17 92.0 118 52.5
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 3.2e-17 92.0 126 52.4
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 1.2e-16 90.1 103 52.4
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 2.1e-16 89.4 117 44.4
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 2.5e-14 82.4 134 43.3
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 6.8e-12 74.3 54 66.7
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 5.8e-11 71.2 41 78.0
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 7.1e-09 64.3 121 43.0
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 1.2e-08 63.5 56 58.9
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 6.0e-08 61.2 47 70.2


User provided reference genes

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