Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR134470 Cardamine hirsuta HOM05D004167 ORTHO05D005012 1.4e-104 382.9 187 100.0
AL4G37040 Arabidopsis lyrata HOM05D004167 ORTHO05D005012 8.1e-100 367.1 187 94.7
AT2G39630 Arabidopsis thaliana HOM05D004167 ORTHO05D005012 1.8e-99 365.9 187 94.1
Carub.0004s2167 Capsella rubella HOM05D004167 ORTHO05D005012 5.8e-98 360.9 184 94.0
Thhalv10016901m.g Eutrema salsugineum HOM05D004167 ORTHO05D005012 8.4e-97 357.1 187 91.4
Sp4g21890 Schrenkiella parvula HOM05D004167 ORTHO05D005012 5.5e-96 354.4 185 91.4
BcaB02g09101 Brassica carinata HOM05D004167 ORTHO05D005012 7.1e-96 354.0 187 91.4
C04p07990 Brassica napus HOM05D004167 ORTHO05D005012 2.7e-95 352.1 187 90.9
BolC4t22416H Brassica oleracea HOM05D004167 ORTHO05D005012 2.7e-95 352.1 187 90.9
BraA03t11449Z Brassica rapa HOM05D004167 ORTHO05D005012 6.0e-95 350.9 187 89.8
A05p06810 Brassica napus HOM05D004167 ORTHO05D005012 1.0e-94 350.1 187 89.8
BraA05t19647Z Brassica rapa HOM05D004167 ORTHO05D005012 1.0e-94 350.1 187 90.4
BcaC02g12089 Brassica carinata HOM05D004167 ORTHO05D005012 1.3e-94 349.7 187 90.4
BcaC01g05486 Brassica carinata HOM05D004167 ORTHO05D005012 1.5e-93 346.3 186 88.7
BolC3t15010H Brassica oleracea HOM05D004167 ORTHO05D005012 4.3e-93 344.7 183 89.6
Aa31LG5G20010 Aethionema arabicum HOM05D004167 ORTHO05D005012 1.2e-90 336.7 184 87.0
THA.LOC104824275 Tarenaya hassleriana HOM05D004167 ORTHO05D005012 1.5e-90 336.3 184 85.3
Ciclev10032053m.g Citrus clementina HOM05D004167 ORTHO05D005012 5.7e-85 317.8 183 81.4
SalBow6G7174 Salvia bowleyana HOM05D004167 ORTHO05D005012 7.4e-85 317.4 185 80.5
Thecc.10G042500 Theobroma cacao HOM05D004167 ORTHO05D005012 9.7e-85 317.0 185 81.1
Potri.010G204000 Populus trichocarpa HOM05D004167 ORTHO05D005012 4.8e-84 314.7 185 80.5
Migut.F01510 Erythranthe guttata HOM05D004167 ORTHO05D005012 1.1e-83 313.5 185 81.1
CiPaw.02G183800 Carya illinoinensis HOM05D004167 ORTHO05D005012 1.8e-83 312.8 183 80.9
Lalb_Chr10g0091651 Lupinus albus HOM05D004167 ORTHO05D005012 1.8e-83 312.8 185 77.8
VMungo1383G2822 Vigna mungo HOM05D004167 ORTHO05D005012 3.1e-83 312.0 185 78.4
GSVIVG01016551001 Vitis vinifera HOM05D004167 ORTHO05D005012 3.1e-83 312.0 183 81.4
PGR142G3800 Punica granatum HOM05D004167 ORTHO05D005012 4.1e-83 311.6 183 78.7
Dinv03048 Davidia involucrata HOM05D004167 ORTHO05D005012 6.9e-83 310.8 185 80.0
Eucgr.G02933 Eucalyptus grandis HOM05D004167 ORTHO05D005012 6.9e-83 310.8 185 78.4
Nitab4.5_0010256g0010 Nicotiana tabacum HOM05D004167 ORTHO05D005012 6.9e-83 310.8 185 78.9
Phvul.008G010800 Phaseolus vulgaris HOM05D004167 ORTHO05D005012 9.0e-83 310.5 185 77.8
SGA_v2.0_scaffold108G31010 Striga asiatica HOM05D004167 ORTHO05D005012 9.0e-83 310.5 184 79.3
MSTRG.303 Avicennia marina HOM05D004167 ORTHO05D005012 1.2e-82 310.1 185 78.9
Manes.07G116100 Manihot esculenta HOM05D004167 ORTHO05D005012 1.2e-82 310.1 183 79.2
Gohir.A05G301600 Gossypium hirsutum HOM05D004167 ORTHO05D005012 1.5e-82 309.7 185 78.9
QL08p059807 Quercus lobata HOM05D004167 ORTHO05D005012 1.5e-82 309.7 185 79.5
Atru.chr12.475 Acer truncatum HOM05D004167 ORTHO05D005012 2.6e-82 308.9 183 79.8
ClCG07G003290 Citrullus lanatus HOM05D004167 ORTHO05D005012 2.6e-82 308.9 184 80.4
Atru.chr12.453 Acer truncatum HOM05D004167 ORTHO05D005012 3.4e-82 308.5 183 79.8
Gohir.A10G218700 Gossypium hirsutum HOM05D004167 ORTHO05D005012 3.4e-82 308.5 185 78.9
Gohir.D10G228300 Gossypium hirsutum HOM05D004167 ORTHO05D005012 3.4e-82 308.5 185 78.9
Gorai.011G260700 Gossypium raimondii HOM05D004167 ORTHO05D005012 3.4e-82 308.5 185 78.9
Lj1g0019937 Lotus japonicus HOM05D004167 ORTHO05D005012 3.4e-82 308.5 185 78.9
Gorai.009G319400 Gossypium raimondii HOM05D004167 ORTHO05D005012 4.5e-82 308.1 185 78.4
Glyma.18G291100 Glycine max HOM05D004167 ORTHO05D005012 5.9e-82 307.8 185 78.9
Potri.008G055700 Populus trichocarpa HOM05D004167 ORTHO05D005012 1.3e-81 306.6 183 80.3
Oeu064382.1 Olea europaea HOM05D004167 ORTHO05D005012 1.7e-81 306.2 184 76.6
TWI15G0568 Tripterygium wilfordii HOM05D004167 ORTHO05D005012 1.7e-81 306.2 185 77.3
CSS0037407 Camellia sinensis var. sinensis HOM05D004167 ORTHO05D005012 2.2e-81 305.8 185 79.5
MELO3C023850.2 Cucumis melo HOM05D004167 ORTHO05D005012 2.2e-81 305.8 184 79.3
CAN.G1013.26 Capsicum annuum HOM05D004167 ORTHO05D005012 3.8e-81 305.1 185 76.2
Gohir.D05G301300 Gossypium hirsutum HOM05D004167 ORTHO05D005012 3.8e-81 305.1 185 77.8
MD01G1133900 Malus domestica HOM05D004167 ORTHO05D005012 5.0e-81 304.7 185 77.3
Peaxi162Scf00015g01117 Petunia axillaris HOM05D004167 ORTHO05D005012 5.0e-81 304.7 185 76.8
MD07G1198100 Malus domestica HOM05D004167 ORTHO05D005012 6.5e-81 304.3 185 77.8
AUR62012082 Chenopodium quinoa HOM05D004167 ORTHO05D005012 1.9e-80 302.8 183 78.7
Ca_07311_v3 Cicer arietinum L. HOM05D004167 ORTHO05D005012 1.9e-80 302.8 185 77.8
AUR62039381 Chenopodium quinoa HOM05D004167 ORTHO05D005012 2.5e-80 302.4 183 78.7
Glyma.02G091700 Glycine max HOM05D004167 ORTHO05D005012 2.5e-80 302.4 185 77.8
Prupe.2G235200 Prunus persica HOM05D004167 ORTHO05D005012 2.5e-80 302.4 185 76.8
Gohir.A09G052700 Gossypium hirsutum HOM05D004167 ORTHO05D005012 5.5e-80 301.2 185 76.8
RcHm_v2.0_Chr1g0367061 Rosa chinensis HOM05D004167 ORTHO05D005012 5.5e-80 301.2 183 77.6
Sc11g0007950 Simmondsia chinensis HOM05D004167 ORTHO05D005012 7.2e-80 300.8 185 76.2
CiPaw.01G287300 Carya illinoinensis HOM05D004167 ORTHO05D005012 1.2e-79 300.1 181 79.0
FAN01G0242 Fragaria x ananassa HOM05D004167 ORTHO05D005012 1.6e-79 299.7 183 77.6
arahy.Tifrunner.gnm1.ann1.A8V5RI Arachis hypogaea HOM05D004167 ORTHO05D005012 2.1e-79 299.3 183 75.4
arahy.Tifrunner.gnm1.ann1.TM884Y Arachis hypogaea HOM05D004167 ORTHO05D005012 2.1e-79 299.3 183 75.4
TPR.G1356 Trifolium pratense HOM05D004167 ORTHO05D005012 2.1e-79 299.3 185 76.8
Cc02_g07870 Coffea canephora HOM05D004167 ORTHO05D005012 2.7e-79 298.9 184 76.6
Cfa001475 Carpinus fangiana HOM05D004167 ORTHO05D005012 3.6e-79 298.5 181 79.0
FAN01G1831 Fragaria x ananassa HOM05D004167 ORTHO05D005012 3.6e-79 298.5 183 77.0
Medtr7g026260 Medicago truncatula HOM05D004167 ORTHO05D005012 3.6e-79 298.5 185 76.8
CsaV3_5G026660 Cucumis sativus L. HOM05D004167 ORTHO05D005012 4.6e-79 298.1 185 76.2
Lj8A84T90 Lonicera japonica HOM05D004167 ORTHO05D005012 4.6e-79 298.1 183 77.6
FAN10G4113 Fragaria x ananassa HOM05D004167 ORTHO05D005012 6.1e-79 297.7 183 76.5
Ah.16g102290 Amaranthus hybridus HOM05D004167 ORTHO05D005012 7.9e-79 297.4 183 80.3
CANSAT56G0736 Cannabis sativa HOM05D004167 ORTHO05D005012 7.9e-79 297.4 183 76.0
PGSC0003DMG400023531 Solanum tuberosum HOM05D004167 ORTHO05D005012 7.9e-79 297.4 185 74.1
Rhsim09G0165800 Rhododendron simsii HOM05D004167 ORTHO05D005012 1.8e-78 296.2 183 77.0
Solyc05g054460.3 Solanum lycopersicum HOM05D004167 ORTHO05D005012 1.8e-78 296.2 185 73.5
Sopen05g032950 Solanum pennellii HOM05D004167 ORTHO05D005012 1.8e-78 296.2 185 73.5
TAR623G0075 Trochodendron aralioides HOM05D004167 ORTHO05D005012 1.8e-78 296.2 183 77.0
Cpa.g.sc1.403 Carica papaya HOM05D004167 ORTHO05D005012 2.3e-78 295.8 193 74.6
FvH4_7g22450 Fragaria vesca HOM05D004167 ORTHO05D005012 2.3e-78 295.8 183 76.5
FAN06G2439 Fragaria x ananassa HOM05D004167 ORTHO05D005012 2.3e-78 295.8 183 76.5
FAN06G3201 Fragaria x ananassa HOM05D004167 ORTHO05D005012 2.3e-78 295.8 183 76.5
Sed0007402 Sechium edule HOM05D004167 ORTHO05D005012 3.0e-78 295.4 184 76.1
BraA02t07167Z Brassica rapa HOM05D004167 ORTHO05D005012 3.9e-78 295.0 185 78.9
FAN03G2888 Fragaria x ananassa HOM05D004167 ORTHO05D005012 5.1e-78 294.7 183 76.5
MELO3C021632.2 Cucumis melo HOM05D004167 ORTHO05D005012 1.5e-77 293.1 185 75.1
Nn2g10367 Nelumbo nucifera HOM05D004167 ORTHO05D005012 2.0e-77 292.7 183 75.4
Hund13759 Selenicereus undatus HOM05D004167 ORTHO05D005012 4.3e-77 291.6 183 77.6
unitig_899.g15067 Utricularia gibba HOM05D004167 ORTHO05D005012 4.3e-77 291.6 183 76.0
EL10Ac2g04752 Beta vulgaris HOM05D004167 ORTHO05D005012 4.8e-76 288.1 185 76.8
Sed0027549 Sechium edule HOM05D004167 ORTHO05D005012 6.3e-76 287.7 179 78.8
Lsat_1_v5_gn_9_65421 Lactuca sativa HOM05D004167 ORTHO05D005012 8.2e-76 287.3 183 77.0
HanXRQChr14g0457931 Helianthus annuus HOM05D004167 ORTHO05D005012 1.1e-75 287.0 183 76.0
Aqoxy5G03379 Aquilegia oxysepala HOM05D004167 ORTHO05D005012 1.4e-75 286.6 184 75.5
DCAR_011694 Daucus carota HOM05D004167 ORTHO05D005012 1.4e-75 286.6 183 74.9
MBI14_g20108_MAGBIO Magnolia biondii HOM05D004167 ORTHO05D005012 2.4e-75 285.8 184 73.9
ECA232G2013 Erigeron canadensis HOM05D004167 ORTHO05D005012 2.0e-74 282.7 184 76.6
PSO210G2827 Papaver somniferum HOM05D004167 ORTHO05D005012 2.6e-74 282.3 184 75.0
PSO210G3999 Papaver somniferum HOM05D004167 ORTHO05D005012 2.6e-74 282.3 184 75.0
ECA238G2661 Erigeron canadensis HOM05D004167 ORTHO05D005012 3.4e-74 282.0 183 75.4
ClCG09G019760 Citrullus lanatus HOM05D004167 ORTHO05D005012 5.9e-74 281.2 213 66.2
Zm00001eb062720 Zea mays HOM05D004167 ORTHO05D005012 7.7e-74 280.8 183 73.2
Nn5g26919 Nelumbo nucifera HOM05D004167 ORTHO05D005012 1.3e-73 280.0 191 72.3
Os03g0821800 Oryza sativa ssp. japonica HOM05D004167 ORTHO05D005012 8.5e-73 277.3 185 71.4
HPP92_020200 Vanilla planifolia HOM05D004167 ORTHO05D005012 5.5e-72 274.6 186 69.4
Lsat_1_v5_gn_2_119101 Lactuca sativa HOM05D004167 ORTHO05D005012 3.9e-70 268.5 177 74.6
ATR0559G365 Amborella trichopoda HOM05D004167 ORTHO05D005012 6.7e-70 267.7 183 70.5
Sabra10G0157600 Salix brachista HOM05D004167 ORTHO05D005012 2.0e-69 266.2 197 68.5
Duzib106G0246 Durio zibethinus HOM05D004167 ORTHO05D005012 2.2e-68 262.7 157 79.6
Duzib114G0485 Durio zibethinus HOM05D004167 ORTHO05D005012 2.8e-68 262.3 161 77.6
CDE09G1012 Ceratophyllum demersum HOM05D004167 ORTHO05D005012 4.8e-68 261.5 185 67.6
TAR633G1670 Trochodendron aralioides HOM05D004167 ORTHO05D005012 3.1e-67 258.8 156 78.2
SEGI_18748 Sequoiadendron giganteum HOM05D004167 ORTHO05D005012 9.1e-67 257.3 185 65.9
Mapoly0005s0180 Marchantia polymorpha HOM05D004167 ORTHO05D005012 3.6e-63 245.4 184 62.5
Sabra08G0040300 Salix brachista HOM05D004167 ORTHO05D005012 1.4e-62 243.4 177 68.4
Pp3c6_19470 Physcomitrium patens HOM05D004167 ORTHO05D005012 1.8e-62 243.0 185 63.8
Actinidia13878 Actinidia chinensis HOM05D004167 ORTHO05D005012 3.0e-62 242.3 174 69.5
SMO367G0757 Selaginella moellendorffii HOM05D004167 ORTHO05D005012 3.0e-62 242.3 184 64.1
Dinv26013 Davidia involucrata HOM05D004167 ORTHO05D005012 4.4e-61 238.4 139 81.3
Actinidia13047 Actinidia chinensis HOM05D004167 ORTHO05D005012 4.1e-59 231.9 145 76.6
C03p26250 Brassica napus HOM05D004167 ORTHO05D005012 2.6e-58 229.2 124 89.5
AagrBONN_evm.TU.Sc2ySwM_117.3937 Anthoceros agrestis HOM05D004167 ORTHO05D005012 9.4e-56 220.7 184 58.2
AUR62014580 Chenopodium quinoa HOM05D004167 ORTHO05D005012 1.6e-55 219.9 164 66.5
Pp3c3_37810 Physcomitrium patens HOM05D004167 ORTHO05D005012 6.1e-55 218.0 185 58.4
vmacro10235 Vaccinium macrocarpon HOM05D004167 ORTHO05D005012 1.7e-52 209.9 109 87.2
Hma1.2p1_0683F.1_g202820 Hydrangea macrophylla HOM05D004167 ORTHO05D005012 2.8e-52 209.1 139 73.4
AagrBONN_evm.TU.Sc2ySwM_344.1330 Anthoceros agrestis HOM05D004167 ORTHO05D005012 8.3e-52 207.6 157 62.4
Nitab4.5_0006489g0010 Nicotiana tabacum HOM05D004167 ORTHO05D005012 2.2e-49 199.5 123 78.9
Oeu064381.1 Olea europaea HOM05D004167 ORTHO05D005012 2.9e-49 199.1 124 77.4
Hund16089 Selenicereus undatus HOM05D004167 ORTHO05D005012 1.2e-47 193.7 125 77.6
CsaV3_5G008030 Cucumis sativus L. HOM05D004167 ORTHO05D005012 1.8e-46 189.9 124 76.6
TAR627G1156 Trochodendron aralioides HOM05D004167 ORTHO05D005012 3.0e-46 189.1 120 73.3
MSTRG.8242 Avicennia marina HOM05D004167 ORTHO05D005012 6.8e-46 188.0 103 82.5
Cre16.g652850 Chlamydomonas reinhardtii HOM05D004167 ORTHO05D005012 1.8e-43 179.9 186 48.9
TAR381G1570 Trochodendron aralioides HOM05D004167 ORTHO05D005012 3.4e-37 159.1 127 64.6
SHI22567 Sapria himalayana HOM05D004167 ORTHO05D005012 1.7e-36 156.8 121 64.5
PRCOL_00006983 Prasinoderma coloniale HOM05D004167 ORTHO05D005012 7.8e-34 147.9 183 40.4
EL10Ac8g19589 Beta vulgaris HOM05D004167 ORTHO05D005012 5.6e-32 141.7 123 60.2
Manes.10G030400 Manihot esculenta HOM05D004167 ORTHO05D005012 9.5e-32 141.0 105 69.5
EL10Ac2g03543 Beta vulgaris HOM05D004167 ORTHO05D005012 1.6e-31 140.2 155 53.5
Haze_27280 Corylus avellana HOM05D004167 ORTHO05D005012 8.9e-30 134.4 186 39.8
SMO142G0075 Selaginella moellendorffii HOM05D004167 ORTHO05D005012 9.8e-29 131.0 183 37.7
SMO142G0035 Selaginella moellendorffii HOM05D004167 ORTHO05D005012 8.3e-28 127.9 181 36.5
Cfa024819 Carpinus fangiana HOM05D004167 ORTHO05D005012 5.6e-24 115.2 188 34.6
SHI22568 Sapria himalayana HOM05D004167 ORTHO05D005012 2.9e-20 102.8 74 62.2
Sed0025003 Sechium edule HOM05D004167 ORTHO05D005012 6.4e-20 101.7 78 66.7
vmacro10234 Vaccinium macrocarpon HOM05D004167 ORTHO05D005012 1.1e-19 100.9 76 67.1
Psat3g163360 Pisum sativum HOM05D004167 ORTHO05D005012 2.4e-19 99.8 76 68.4
arahy.Tifrunner.gnm1.ann1.I9KCKB Arachis hypogaea HOM05D001644 ORTHO05D001641 2.5e-16 89.7 140 42.1
EL10Ac3g06649 Beta vulgaris HOM05D004167 ORTHO05D005012 6.8e-14 81.6 73 64.4
PSO079G0067 Papaver somniferum HOM05D004167 ORTHO05D005012 7.6e-13 78.2 67 58.2
EL10Ac5g11410 Beta vulgaris HOM05D004167 ORTHO05D005012 1.3e-12 77.4 102 47.1
Nitab4.5_0000065g0040 Nicotiana tabacum HOM05D004167 ORTHO05D005012 3.5e-10 69.3 55 60.0


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