Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR131570 Cardamine hirsuta HOM05D003265 ORTHO05D003819 6.2e-303 1043.5 590 100.0
Sp4g19390 Schrenkiella parvula HOM05D003265 ORTHO05D003819 2.8e-162 576.2 645 59.1
Thhalv10016413m.g Eutrema salsugineum HOM05D003265 ORTHO05D003819 1.1e-161 574.3 647 59.8
AL4G33420 Arabidopsis lyrata HOM05D003265 ORTHO05D003819 1.7e-159 567.0 599 60.3
Carub.0004s1895 Capsella rubella HOM05D003265 ORTHO05D003819 3.9e-156 555.8 605 60.3
AT2G37070 Arabidopsis thaliana HOM05D003265 ORTHO05D003819 7.6e-136 488.4 602 55.8
BcaB06g28974 Brassica carinata HOM05D003265 ORTHO05D003819 1.2e-109 401.4 637 50.4
AL5G34230 Arabidopsis lyrata HOM05D003265 ORTHO05D003819 1.5e-102 377.9 639 45.7
Thhalv10010259m.g Eutrema salsugineum HOM05D003265 ORTHO05D003819 7.5e-99 365.5 632 44.8
AT3G53320 Arabidopsis thaliana HOM05D003265 ORTHO05D003819 9.8e-99 365.2 638 44.5
Aa31LG5G22370 Aethionema arabicum HOM05D003265 ORTHO05D003819 1.7e-95 354.4 621 48.6
Carub.0005s1987 Capsella rubella HOM05D003265 ORTHO05D003819 1.5e-94 351.3 631 46.0
C04p65680 Brassica napus HOM05D003265 ORTHO05D003819 1.9e-94 350.9 620 46.5
Aa31LG10G8510 Aethionema arabicum HOM05D003265 ORTHO05D003819 1.2e-91 341.7 644 43.6
Sp5g09010 Schrenkiella parvula HOM05D003265 ORTHO05D003819 2.2e-90 337.4 634 44.5
BolC4t28061H Brassica oleracea HOM05D003265 ORTHO05D003819 2.8e-90 337.0 621 45.1
CARHR163240 Cardamine hirsuta HOM05D003265 ORTHO05D003819 1.1e-89 335.1 642 43.3
BraA04t18315Z Brassica rapa HOM05D003265 ORTHO05D003819 1.4e-89 334.7 603 46.4
A04p28340 Brassica napus HOM05D003265 ORTHO05D003819 2.4e-89 334.0 604 46.9
THA.LOC104806495 Tarenaya hassleriana HOM05D003265 ORTHO05D003819 1.2e-85 321.6 650 42.2
BcaB01g00290 Brassica carinata HOM05D003265 ORTHO05D003819 1.8e-84 317.8 632 45.1
BcaC02g07549 Brassica carinata HOM05D003265 ORTHO05D003819 5.4e-81 306.2 609 43.3
A09p46340 Brassica napus HOM05D003265 ORTHO05D003819 1.5e-75 288.1 633 43.4
BraA09t40099Z Brassica rapa HOM05D003265 ORTHO05D003819 5.8e-75 286.2 637 43.5
BcaC07g39697 Brassica carinata HOM05D003265 ORTHO05D003819 3.6e-69 266.9 632 41.6
BolC8t50462H Brassica oleracea HOM05D003265 ORTHO05D003819 3.6e-69 266.9 632 41.6
C08p28530 Brassica napus HOM05D003265 ORTHO05D003819 8.1e-69 265.8 632 41.5
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 1.3e-37 162.2 682 30.8
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 2.1e-32 144.8 653 29.6
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 3.5e-32 144.1 666 33.0
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 5.1e-31 140.2 615 30.9
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 7.4e-30 136.3 640 30.0
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 7.4e-30 136.3 639 30.5
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 2.8e-29 134.4 649 31.0
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 6.2e-29 133.3 636 29.9
Duzib106G1383 Durio zibethinus HOM05D003265 ORTHO05D003819 8.2e-29 132.9 670 30.0
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 6.9e-28 129.8 627 31.3
Ciclev10011133m.g Citrus clementina HOM05D003265 ORTHO05D003819 8.4e-26 122.9 649 32.0
Potri.016G085600 Populus trichocarpa HOM05D003265 ORTHO05D003819 4.2e-25 120.6 612 31.0
Haze_20650 Corylus avellana HOM05D003265 ORTHO05D003819 7.1e-25 119.8 654 28.7
CiPaw.10G137500 Carya illinoinensis HOM05D003265 ORTHO05D003819 2.7e-24 117.9 660 29.4
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 1.8e-23 115.2 652 31.0
Glyma.03G177900 Glycine max HOM05D003265 ORTHO05D003819 3.9e-23 114.0 588 29.1
Manes.08G003400 Manihot esculenta HOM05D003265 ORTHO05D003819 9.7e-22 109.4 640 29.8
Phvul.001G174800 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 1.6e-21 108.6 631 29.3
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 4.8e-21 107.1 477 31.4
MD04G1104400 Malus domestica HOM05D003265 ORTHO05D003819 1.1e-20 105.9 648 29.5
PGSC0003DMG400001737 Solanum tuberosum HOM05D003265 ORTHO05D003819 1.8e-20 105.1 537 30.4
Lalb_Chr01g0019031 Lupinus albus HOM05D003265 ORTHO05D003819 5.3e-20 103.6 587 29.3
Lalb_Chr20g0112961 Lupinus albus HOM05D003265 ORTHO05D003819 6.9e-20 103.2 549 29.1
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 3.4e-19 100.9 645 29.5
TWI77G0315 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 3.4e-19 100.9 579 29.2
Eucgr.A01175 Eucalyptus grandis HOM05D003265 ORTHO05D003819 5.9e-19 100.1 641 28.4
Ca_08825_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 1.0e-18 99.4 644 28.4
Medtr7g100700 Medicago truncatula HOM05D003265 ORTHO05D003819 1.3e-18 99.0 628 30.1
Prupe.6G241300 Prunus persica HOM05D003265 ORTHO05D003819 1.7e-18 98.6 651 31.6
Nitab4.5_0001142g0090 Nicotiana tabacum HOM05D000855 ORTHO05D002321 5.0e-18 97.1 559 28.3
CsaV3_3G035550 Cucumis sativus L. HOM05D003265 ORTHO05D003819 6.5e-18 96.7 591 29.3
FvH4_6g15330 Fragaria vesca HOM05D003265 ORTHO05D003819 8.5e-18 96.3 662 30.1
FAN05G5644 Fragaria x ananassa HOM05D003265 ORTHO05D003819 8.5e-18 96.3 683 30.0
Psat3g044800 Pisum sativum HOM05D003265 ORTHO05D003819 1.1e-17 95.9 622 28.5
Sopen09g002240 Solanum pennellii HOM05D003265 ORTHO05D003819 1.4e-17 95.5 523 29.6
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.4e-17 95.5 671 28.9
Sabra16G0092200 Salix brachista HOM05D003265 ORTHO05D003819 3.2e-17 94.4 557 30.0
Psat6g070560 Pisum sativum HOM05D003265 ORTHO05D003819 7.2e-17 93.2 567 30.0
arahy.Tifrunner.gnm1.ann1.H355B7 Arachis hypogaea HOM05D003265 ORTHO05D003819 1.2e-16 92.4 294 34.7
VMungo1383G3553 Vigna mungo HOM05D003265 ORTHO05D003819 2.1e-16 91.7 634 27.6
ClCG10G020560 Citrullus lanatus HOM05D003265 ORTHO05D003819 2.7e-16 91.3 533 28.9
AUR62040021 Chenopodium quinoa HOM05D003265 ORTHO05D003819 6.1e-16 90.1 576 28.5
Solyc09g007340.4 Solanum lycopersicum HOM05D000855 ORTHO05D002321 7.9e-16 89.7 506 29.8
Nitab4.5_0003895g0030 Nicotiana tabacum HOM05D000855 ORTHO05D002321 2.3e-15 88.2 535 28.8
Lsat_1_v5_gn_1_53881 Lactuca sativa HOM05D003265 ORTHO05D003819 1.9e-14 85.1 461 28.2
Lj1g0023124 Lotus japonicus HOM05D003265 ORTHO05D003819 3.3e-14 84.3 580 29.8
Gorai.006G168800 Gossypium raimondii HOM05D003265 ORTHO05D003819 4.3e-14 84.0 618 26.5
RcHm_v2.0_Chr3g0468801 Rosa chinensis HOM05D003265 ORTHO05D003819 4.3e-14 84.0 638 27.3
MELO3C009314.2 Cucumis melo HOM05D003265 ORTHO05D003819 5.7e-14 83.6 617 28.5
TPR.G36939 Trifolium pratense HOM05D003265 ORTHO05D003819 1.3e-13 82.4 617 28.7
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 1.7e-13 82.0 596 31.4
PGR004G1993 Punica granatum HOM05D000855 ORTHO05D002321 2.2e-13 81.6 548 28.1
Sabra06G0103300 Salix brachista HOM05D003265 ORTHO05D003819 2.2e-13 81.6 662 28.5
FAN05G5023 Fragaria x ananassa HOM05D003265 ORTHO05D003819 2.8e-13 81.3 664 26.4
SalBow4G0859 Salvia bowleyana HOM05D003265 ORTHO05D003819 3.7e-13 80.9 598 26.9
ECA248G3421 Erigeron canadensis HOM05D002706 ORTHO05D003253 4.8e-13 80.5 558 27.8
HanXRQChr01g0027471 Helianthus annuus HOM05D003265 ORTHO05D003819 4.8e-13 80.5 565 26.5
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 6.3e-13 80.1 637 27.2
PSO339G3745 Papaver somniferum HOM05D003265 ORTHO05D003819 6.3e-13 80.1 661 30.6
EL10Ac7g17351 Beta vulgaris HOM05D003265 ORTHO05D003819 1.1e-12 79.3 582 28.4
Glyma.19G178700 Glycine max HOM05D003265 ORTHO05D003819 1.1e-12 79.3 549 26.2
AUR62042920 Chenopodium quinoa HOM05D003265 ORTHO05D003819 2.4e-12 78.2 524 28.1
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 2.4e-12 78.2 642 28.3
Migut.L01659 Erythranthe guttata HOM05D003265 ORTHO05D003819 3.1e-12 77.8 561 26.7
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 3.1e-12 77.8 579 26.1
Ah.15g092100 Amaranthus hybridus HOM05D003265 ORTHO05D003819 4.1e-12 77.4 625 26.7
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 4.1e-12 77.4 626 27.5
Gohir.D09G147700 Gossypium hirsutum HOM05D003265 ORTHO05D003819 6.9e-12 76.6 522 27.6
HanXRQChr11g0350071 Helianthus annuus HOM05D003265 ORTHO05D003819 9.1e-12 76.3 531 27.5
Actinidia13106 Actinidia chinensis HOM05D003265 ORTHO05D003819 1.2e-11 75.9 302 29.8
DCAR_017729 Daucus carota HOM05D003265 ORTHO05D003819 1.5e-11 75.5 637 27.0
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 1.5e-11 75.5 638 25.5
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 2.0e-11 75.1 555 27.6
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 2.6e-11 74.7 595 26.7
Lj5g0012648 Lotus japonicus HOM05D003265 ORTHO05D003819 5.9e-11 73.6 599 29.0
MSTRG.26726 Avicennia marina HOM05D003265 ORTHO05D003819 1.0e-10 72.8 563 28.1
Potri.006G131650 Populus trichocarpa HOM05D003265 ORTHO05D003819 1.0e-10 72.8 647 29.5
arahy.Tifrunner.gnm1.ann1.1ZS95I Arachis hypogaea HOM05D003265 ORTHO05D003819 1.7e-10 72.0 574 29.8
PSO384G1633 Papaver somniferum HOM05D003265 ORTHO05D003819 2.2e-10 71.6 662 29.0
vmacro20061 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 2.2e-10 71.6 241 33.2
Hma1.2p1_0111F.1_g053890 Hydrangea macrophylla HOM05D003265 ORTHO05D003819 3.8e-10 70.9 120 41.7
Sabra19G0043100 Salix brachista HOM05D003265 ORTHO05D010313 3.8e-10 70.9 103 45.6
Sabra19G0046300 Salix brachista HOM05D003265 ORTHO05D010313 3.8e-10 70.9 103 45.6
Aqoxy3G02606 Aquilegia oxysepala HOM05D003265 ORTHO05D003819 1.1e-09 69.3 660 27.1
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 1.1e-09 69.3 205 34.1
AL1G31250 Arabidopsis lyrata HOM05D003265 ORTHO05D003819 3.2e-09 67.8 66 59.1
Oeu026844.1 Olea europaea HOM05D003265 ORTHO05D003819 3.2e-09 67.8 559 27.7
Prupe.2G219100 Prunus persica HOM05D003265 ORTHO05D003819 3.2e-09 67.8 498 29.1
Medtr1g066870 Medicago truncatula HOM05D003265 ORTHO05D003819 7.2e-09 66.6 572 28.3
Oeu035141.2 Olea europaea HOM05D003265 ORTHO05D003819 7.2e-09 66.6 642 27.1
Hund20166 Selenicereus undatus HOM05D003265 ORTHO05D003819 7.2e-09 66.6 596 26.3
TPR.G30247 Trifolium pratense HOM05D003265 ORTHO05D003819 1.2e-08 65.9 556 28.1
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 2.1e-08 65.1 645 26.0
unitig_746.g26760 Utricularia gibba HOM05D003265 ORTHO05D003819 2.7e-08 64.7 159 35.8
FAN09G0144 Fragaria x ananassa HOM05D003265 ORTHO05D003819 4.7e-08 63.9 658 26.0
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 7.9e-08 63.2 655 24.6
Sc20g0004060 Simmondsia chinensis HOM05D003265 ORTHO05D003819 3.0e-07 61.2 583 27.3
Sed0003387 Sechium edule HOM05D003265 ORTHO05D003819 6.7e-07 60.1 592 27.0
DCAR_014962 Daucus carota HOM05D003265 ORTHO05D003819 3.3e-06 57.8 521 26.9
CSS0028328 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 5.7e-06 57.0 163 34.4
QL08p056892 Quercus lobata HOM05D003265 ORTHO05D003819 5.7e-06 57.0 587 26.1


User provided reference genes

Program Settings