Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR128970 Cardamine hirsuta HOM05D010090 ORTHO05D013237 9.6e-33 142.9 72 100.0
BraA04t18163Z Brassica rapa HOM05D010090 ORTHO05D013237 5.1e-18 94.0 67 64.2
BcaB06g28802 Brassica carinata HOM05D010090 ORTHO05D013237 2.5e-17 91.7 65 64.6
BcaC02g07758 Brassica carinata HOM05D010090 ORTHO05D013237 7.4e-17 90.1 65 64.6
BolC4t27874H Brassica oleracea HOM05D010090 ORTHO05D013237 7.4e-17 90.1 65 64.6
BcaC05g28350 Brassica carinata HOM05D010090 ORTHO05D013237 1.2e-14 82.8 67 56.7
C04p64000 Brassica napus HOM05D010090 ORTHO05D013237 5.9e-14 80.5 65 53.8
Thhalv10017697m.g Eutrema salsugineum HOM05D010090 ORTHO05D013237 1.0e-13 79.7 56 62.5
Thhalv10017891m.g Eutrema salsugineum HOM05D010090 ORTHO05D013237 1.0e-13 79.7 67 56.7
CARHR100980 Cardamine hirsuta HOM05D010090 ORTHO05D013237 2.9e-13 78.2 60 58.3
BolC3t14647H Brassica oleracea HOM05D010090 ORTHO05D013237 5.0e-13 77.4 67 55.2
BcaC01g05761 Brassica carinata HOM05D010090 ORTHO05D013237 8.5e-13 76.6 67 53.7
C03p22500 Brassica napus HOM05D010090 ORTHO05D013237 8.5e-13 76.6 67 53.7
BcaC01g05753 Brassica carinata HOM05D010090 ORTHO05D023709 9.4e-12 73.2 58 56.9
C03p22560 Brassica napus HOM05D010090 ORTHO05D023709 9.4e-12 73.2 58 56.9
BolC3t14653H Brassica oleracea HOM05D010090 ORTHO05D023709 9.4e-12 73.2 58 56.9
A04p26580 Brassica napus HOM05D010090 ORTHO05D013237 1.2e-11 72.8 63 57.1
BcaC01g05755 Brassica carinata HOM05D010090 ORTHO05D013237 2.7e-11 71.6 62 51.6
C03p22550 Brassica napus HOM05D010090 ORTHO05D013237 2.7e-11 71.6 62 51.6
BolC3t14652H Brassica oleracea HOM05D010090 ORTHO05D013237 2.7e-11 71.6 62 51.6
AT2G04800 Arabidopsis thaliana HOM05D010090 ORTHO05D023709 3.3e-09 64.7 62 48.4
BcaB06g28801 Brassica carinata HOM05D010090 ORTHO05D013237 4.1e-07 57.8 54 48.1
BcaC05g28658 Brassica carinata HOM05D010326 ORTHO05D012728 1.2e-06 56.2 60 43.3
A10p19220 Brassica napus HOM05D010326 ORTHO05D012728 1.2e-06 56.2 60 43.3
C03p79750 Brassica napus HOM05D010326 ORTHO05D012728 1.2e-06 56.2 60 43.3
C05p47880 Brassica napus HOM05D010326 ORTHO05D012728 1.2e-06 56.2 60 43.3
BolC5t33502H Brassica oleracea HOM05D010326 ORTHO05D012728 1.2e-06 56.2 60 43.3
Aa31LG3G5580 Aethionema arabicum HOM05D010326 ORTHO05D012728 2.0e-06 55.5 60 41.7
Carub.0011s0008 Capsella rubella HOM05D010326 ORTHO05D012728 5.9e-06 53.9 60 41.7


User provided reference genes

Program Settings