Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR124630 Cardamine hirsuta HOM05D009623 ORTHO05D011251 3.5e-39 164.5 82 100.0
Sp4g13550 Schrenkiella parvula HOM05D009623 ORTHO05D011251 1.1e-32 142.9 82 84.1
Thhalv10017782m.g Eutrema salsugineum HOM05D009623 ORTHO05D011251 1.6e-31 139.0 82 84.1
AL4G26240 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 3.5e-31 137.9 82 84.1
AT2G31081 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 5.1e-30 134.0 82 84.1
BraA04t17906Z Brassica rapa HOM05D009623 ORTHO05D011251 8.7e-30 133.3 83 80.7
A04p23810 Brassica napus HOM05D009623 ORTHO05D011251 1.1e-29 132.9 83 80.7
BcaB06g28408 Brassica carinata HOM05D009623 ORTHO05D011251 2.5e-29 131.7 83 80.7
BcaB06g28482 Brassica carinata HOM05D009623 ORTHO05D011251 7.3e-29 130.2 83 79.5
C04p60300 Brassica napus HOM05D009623 ORTHO05D011251 7.3e-29 130.2 83 79.5
BolC4t27531H Brassica oleracea HOM05D009623 ORTHO05D011251 7.3e-29 130.2 83 79.5
Carub.0004s1231 Capsella rubella HOM05D009623 ORTHO05D011251 1.3e-28 129.4 82 79.3
Aa31LG5G5840 Aethionema arabicum HOM05D009623 ORTHO05D011251 6.0e-23 110.5 84 70.2
AT1G06225 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 1.1e-21 106.3 84 66.7
AL1G16210 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 1.9e-21 105.5 84 65.5
CARHR005760 Cardamine hirsuta HOM05D009623 ORTHO05D011251 4.3e-21 104.4 84 65.5
THA.LOC109116767 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 1.3e-20 102.8 82 62.2
Carub.0001s0558 Capsella rubella HOM05D009623 ORTHO05D011251 1.8e-19 99.0 82 63.4
BcaB02g06813 Brassica carinata HOM05D009623 ORTHO05D011251 2.4e-19 98.6 84 61.9
BraA10t42755Z Brassica rapa HOM05D009623 ORTHO05D011251 9.0e-19 96.7 84 63.1
A10p04840 Brassica napus HOM05D009623 ORTHO05D011251 1.5e-18 95.9 84 61.9
BolC5t29225H Brassica oleracea HOM05D009623 ORTHO05D011251 6.5e-17 90.5 84 56.0
THA.LOC104800858 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 1.1e-16 89.7 82 56.1
BcaC05g24293 Brassica carinata HOM05D009623 ORTHO05D011251 7.1e-16 87.0 84 54.8
C05p04540 Brassica napus HOM05D009623 ORTHO05D011251 7.1e-16 87.0 84 54.8
Ciclev10017647m.g Citrus clementina HOM05D009623 ORTHO05D011251 1.2e-07 59.7 84 40.5
Cpa.g.sc209.26 Carica papaya HOM05D009623 ORTHO05D011251 4.6e-07 57.8 89 42.7
Cfa014706 Carpinus fangiana HOM05D017147 ORTHO05D011251 7.9e-07 57.0 82 40.2
Potri.013G119100 Populus trichocarpa HOM05D017147 ORTHO05D011251 1.3e-06 56.2 82 36.6
Prupe.4G170900 Prunus persica HOM05D009672 ORTHO05D011357 1.8e-06 55.8 82 42.7
C06p34240 Brassica napus HOM05D009672 ORTHO05D011357 2.3e-06 55.5 87 35.6
Carub.0002s1994 Capsella rubella HOM05D009672 ORTHO05D011357 2.3e-06 55.5 83 39.8
TAR629G1463 Trochodendron aralioides HOM05D010626 ORTHO05D012901 5.1e-06 54.3 82 39.0
Potri.019G091100 Populus trichocarpa HOM05D017147 ORTHO05D011251 8.7e-06 53.5 86 36.0


User provided reference genes

Program Settings