Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR124480 Cardamine hirsuta HOM05D012320 ORTHO05D014318 2.0e-124 449.5 307 100.0
Thhalv10017128m.g Eutrema salsugineum HOM05D012320 ORTHO05D014318 4.2e-37 159.5 311 43.7
AL4G25990 Arabidopsis lyrata HOM05D012320 ORTHO05D014318 1.8e-35 154.1 308 43.5
Carub.0004s1218 Capsella rubella HOM05D012320 ORTHO05D014318 1.3e-33 147.9 311 42.8
AT2G30960 Arabidopsis thaliana HOM05D012320 ORTHO05D014318 8.3e-25 118.6 190 47.4
BcaC02g11182 Brassica carinata HOM05D012320 ORTHO05D014318 4.5e-23 112.8 195 48.2
C04p19530 Brassica napus HOM05D012320 ORTHO05D014318 4.5e-23 112.8 195 48.2
BolC4t23485H Brassica oleracea HOM05D012320 ORTHO05D014318 4.5e-23 112.8 195 48.2
A05p14680 Brassica napus HOM05D012320 ORTHO05D014318 6.1e-20 102.4 194 44.8
BraA05t20397Z Brassica rapa HOM05D012320 ORTHO05D014318 5.2e-19 99.4 193 39.4
Sp4g13450 Schrenkiella parvula HOM05D012320 ORTHO05D014318 4.9e-17 92.8 125 56.8
Aa31LG5G5940 Aethionema arabicum HOM05D012320 ORTHO05D014318 1.0e-11 75.1 204 38.2
Sp1g05180 Schrenkiella parvula HOM05D011279 ORTHO05D013458 6.4e-09 65.9 163 36.2
BcaB02g06794 Brassica carinata HOM05D011279 ORTHO05D013458 1.7e-06 57.8 156 35.3
THA.LOC104825784 Tarenaya hassleriana HOM05D012320 ORTHO05D014318 3.0e-06 57.0 110 46.4
A10p05090 Brassica napus HOM05D011279 ORTHO05D013458 6.6e-06 55.8 151 33.8


User provided reference genes

Program Settings