Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 1.6e-211 739.2 376 100.0
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 3.7e-192 674.9 378 90.7
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 2.2e-189 665.6 378 90.5
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 9.4e-188 660.2 377 87.5
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 2.0e-185 652.5 377 88.1
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 4.8e-184 647.9 376 87.2
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 2.2e-181 639.0 377 84.4
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 8.8e-178 627.1 374 85.0
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 3.3e-177 625.2 374 84.8
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 4.4e-177 624.8 374 82.4
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 5.7e-177 624.4 374 82.4
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 9.7e-177 623.6 375 84.8
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 4.8e-176 621.3 376 81.9
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 3.1e-159 565.5 399 70.7
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 1.1e-140 503.8 390 66.4
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 3.6e-139 498.8 389 65.3
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 6.8e-138 494.6 329 69.9
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 6.8e-138 494.6 393 63.4
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 1.2e-137 493.8 324 71.9
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.2e-137 493.8 391 65.2
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.2e-137 493.8 323 71.8
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.5e-137 493.4 333 69.7
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 5.8e-137 491.5 332 68.7
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 4.9e-136 488.4 328 68.3
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 8.3e-136 487.6 326 70.6
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.4e-135 486.9 328 68.3
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.6e-134 483.4 328 68.0
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 2.7e-134 482.6 390 63.3
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 3.5e-134 482.3 324 69.8
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 4.6e-134 481.9 394 63.2
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 6.0e-134 481.5 327 67.9
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 6.0e-134 481.5 329 69.3
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 7.8e-134 481.1 396 62.6
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.3e-133 480.3 319 69.3
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 6.6e-133 478.0 329 67.8
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 8.6e-133 477.6 387 62.3
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 1.1e-132 477.2 394 61.4
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.9e-132 476.5 322 70.2
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.9e-132 476.5 386 62.7
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 5.6e-132 474.9 333 67.0
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 9.5e-132 474.2 394 62.4
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 9.5e-132 474.2 377 62.9
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.2e-131 473.8 401 62.6
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.2e-131 473.8 323 68.1
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.6e-131 473.4 398 60.3
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 2.8e-131 472.6 331 66.2
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 6.2e-131 471.5 324 67.9
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 8.1e-131 471.1 328 67.4
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 8.1e-131 471.1 397 61.5
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 1.1e-130 470.7 331 66.8
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 1.4e-130 470.3 325 67.4
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.8e-130 469.9 310 71.6
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 2.3e-130 469.5 378 65.1
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 3.1e-130 469.2 328 67.1
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 3.1e-130 469.2 321 68.2
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 3.1e-130 469.2 318 70.1
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 8.9e-130 467.6 397 61.7
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 8.9e-130 467.6 326 65.6
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 8.9e-130 467.6 326 65.6
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 1.5e-129 466.8 394 59.1
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 2.6e-129 466.1 384 59.1
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 2.6e-129 466.1 329 66.3
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 9.8e-129 464.2 308 70.8
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 3.7e-128 462.2 383 60.1
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 4.9e-128 461.8 321 67.3
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 6.4e-128 461.5 328 67.1
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 6.4e-128 461.5 322 67.4
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 1.1e-127 460.7 399 60.9
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.4e-127 460.3 316 67.7
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 2.4e-127 459.5 393 60.1
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 4.1e-127 458.8 318 68.9
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 4.1e-127 458.8 322 67.4
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 5.4e-127 458.4 400 61.5
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 5.4e-127 458.4 336 64.0
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 7.1e-127 458.0 393 58.8
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 2.7e-126 456.1 391 61.9
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 3.5e-126 455.7 397 60.2
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 3.5e-126 455.7 381 59.6
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 4.6e-126 455.3 394 60.2
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.0e-125 454.1 396 58.6
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.7e-125 453.4 332 62.7
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.9e-125 452.2 403 57.8
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.5e-124 450.3 389 59.4
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 9.5e-124 447.6 382 58.4
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.2e-123 447.2 392 59.2
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 2.1e-123 446.4 378 61.1
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.1e-123 446.4 377 60.2
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 2.3e-122 443.0 321 65.1
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 9.2e-119 431.0 318 65.1
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 7.8e-118 427.9 329 59.9
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 6.6e-117 424.9 433 51.5
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 1.2e-115 420.6 390 55.9
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 3.6e-115 419.1 291 66.7
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 8.9e-114 414.5 317 62.8
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 2.7e-110 402.9 289 65.4
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 2.7e-110 402.9 320 58.8
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 3.3e-108 396.0 323 65.0
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 2.8e-107 392.9 313 59.4
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.2e-104 383.3 394 50.3
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 1.2e-102 377.5 303 60.7
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 3.4e-97 359.4 320 55.0
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 2.9e-96 356.3 332 52.4
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.3e-92 342.8 247 66.4
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.1e-91 340.1 331 52.9
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.0e-89 333.6 309 50.5
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.6e-89 333.2 309 50.8
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.3e-76 289.7 225 63.1
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.2e-36 158.3 99 65.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 7.7e-33 145.6 93 72.0
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 9.5e-31 138.7 390 29.2
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 6.4e-27 125.9 127 51.2
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 9.8e-20 102.1 77 55.8
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 3.7e-19 100.1 67 58.2
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 4.1e-18 96.7 49 89.8
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 3.9e-16 90.1 264 26.1
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.5e-15 88.2 114 46.5
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 6.4e-11 72.8 48 70.8
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 6.0e-09 66.2 128 31.2


User provided reference genes

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