Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.2e-211 739.6 387 100.0
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 2.3e-197 692.2 387 90.7
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 8.7e-197 690.3 387 90.2
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 7.4e-196 687.2 384 90.4
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 9.6e-196 686.8 389 89.2
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 8.4e-192 673.7 384 87.5
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 8.4e-192 673.7 384 87.5
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.1e-191 673.3 384 87.0
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.5e-191 671.0 384 87.0
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.5e-191 671.0 384 87.0
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 1.2e-190 669.8 392 88.5
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.3e-187 659.8 387 86.3
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 1.9e-175 619.4 386 81.3
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 3.2e-175 618.6 397 77.3
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.4e-162 576.6 341 82.1
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 4.1e-162 575.1 336 82.7
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.0e-160 570.5 332 81.3
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.3e-160 570.1 340 78.8
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.7e-160 569.7 339 80.5
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.0e-160 568.2 331 81.0
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.1e-159 567.0 331 80.7
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 2.5e-159 565.8 334 79.0
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 4.2e-159 565.1 336 78.3
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 5.5e-159 564.7 331 80.1
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 4.7e-158 561.6 334 79.9
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 4.7e-158 561.6 334 79.9
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 8.0e-158 560.8 334 79.9
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 1.8e-157 559.7 331 80.1
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.8e-157 559.7 387 72.4
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.8e-157 559.7 345 77.1
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.0e-157 558.9 377 73.2
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 3.9e-157 558.5 331 80.1
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 3.9e-157 558.5 337 78.3
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 6.7e-157 557.8 340 79.4
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 1.1e-156 557.0 343 77.8
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.1e-156 557.0 331 78.2
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.0e-156 556.2 333 78.7
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 2.0e-156 556.2 336 78.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 3.3e-156 555.4 337 78.3
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 4.4e-156 555.1 331 79.2
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 4.4e-156 555.1 338 78.1
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.7e-156 554.7 336 78.0
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 7.4e-156 554.3 333 79.0
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 9.7e-156 553.9 330 78.5
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 9.7e-156 553.9 335 78.2
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.3e-155 553.5 333 77.5
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.3e-155 553.5 336 78.9
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.7e-155 553.1 338 76.3
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.7e-155 553.1 328 79.3
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 2.8e-155 552.4 334 78.7
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 3.7e-155 552.0 338 77.5
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.8e-155 551.6 339 78.2
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 4.8e-155 551.6 335 76.4
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 6.3e-155 551.2 334 78.4
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 6.3e-155 551.2 334 78.4
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 6.3e-155 551.2 334 78.7
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 6.3e-155 551.2 337 79.2
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 6.3e-155 551.2 342 76.0
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 6.3e-155 551.2 339 77.0
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.1e-154 550.4 333 78.4
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 4.1e-154 548.5 333 77.2
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 4.1e-154 548.5 338 77.8
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 5.3e-154 548.1 336 78.0
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 5.3e-154 548.1 378 70.6
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 5.3e-154 548.1 378 71.2
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 7.0e-154 547.7 336 78.3
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 9.1e-154 547.4 379 70.7
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.2e-153 547.0 340 77.1
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 2.6e-153 545.8 378 70.6
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 4.5e-153 545.0 338 77.2
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 1.3e-152 543.5 336 77.1
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.7e-152 543.1 380 71.1
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 1.7e-152 543.1 341 76.5
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 2.2e-152 542.7 337 77.7
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 2.2e-152 542.7 334 76.9
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.2e-152 542.7 334 76.6
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.9e-152 542.3 343 74.9
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 3.8e-152 542.0 330 77.9
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 3.8e-152 542.0 350 74.9
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 8.5e-152 540.8 334 76.3
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.1e-151 540.4 394 69.5
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.9e-151 539.7 341 75.7
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 9.4e-151 537.3 312 80.1
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 1.6e-150 536.6 337 76.0
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 2.1e-150 536.2 338 76.0
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 3.6e-150 535.4 428 63.8
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 3.0e-149 532.3 333 75.4
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 3.7e-147 525.4 387 69.0
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 8.2e-147 524.2 326 76.1
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 2.4e-146 522.7 330 76.1
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 3.1e-146 522.3 332 76.2
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 2.2e-144 516.2 327 73.7
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 3.8e-144 515.4 363 70.2
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.1e-143 513.8 305 79.3
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.3e-141 506.1 299 80.9
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 2.0e-140 503.1 334 74.0
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 2.6e-140 502.7 334 73.1
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 7.7e-137 491.1 305 76.7
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 2.5e-135 486.1 336 72.0
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 5.2e-133 478.4 334 70.4
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 2.6e-132 476.1 306 74.2
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 5.7e-132 474.9 315 74.0
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.4e-130 470.3 367 65.1
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.7e-129 466.1 324 65.7
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.6e-126 456.8 328 66.8
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.3e-125 453.0 323 66.3
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.1e-118 429.9 321 63.2
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 4.7e-118 428.7 257 78.6
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 2.0e-108 396.7 333 61.0
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 4.9e-107 392.1 282 66.3
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.0e-104 384.4 217 84.3
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 3.5e-89 332.8 296 55.7
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 1.2e-84 317.8 294 53.4
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.9e-79 300.4 303 49.2
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 3.3e-79 299.7 291 56.4
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 3.9e-72 276.2 182 73.6
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 3.9e-64 249.6 170 74.7
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.4e-50 204.5 180 57.2
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.2e-46 190.7 130 64.6
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 5.5e-42 176.0 113 77.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 8.0e-33 145.6 102 68.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.0e-23 114.4 103 54.4
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.6e-20 104.8 161 38.5
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 2.0e-20 104.4 64 71.9
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 8.6e-19 99.0 106 50.0
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.6e-17 93.6 106 48.1
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 1.5e-15 88.2 55 69.1


User provided reference genes

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