Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 2.8e-120 435.3 218 100.0
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 5.2e-98 361.3 200 88.5
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.7e-96 356.3 200 86.5
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 2.2e-96 355.9 200 87.5
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 3.7e-96 355.1 201 87.1
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 3.7e-96 355.1 201 86.6
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 2.0e-89 332.8 200 81.0
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.1e-87 327.0 203 79.3
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 1.9e-87 326.2 204 80.9
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 1.9e-87 326.2 204 80.9
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 1.2e-86 323.6 202 80.7
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 5.1e-85 318.2 206 79.1
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 1.2e-83 313.5 204 77.0
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 4.7e-83 311.6 206 77.7
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 4.0e-82 308.5 207 76.8
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 4.4e-81 305.1 206 73.3
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 1.1e-74 283.9 203 69.0
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 5.2e-74 281.6 207 68.6
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 5.2e-74 281.6 203 69.0
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 5.2e-74 281.6 205 69.8
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 5.8e-73 278.1 205 67.8
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 4.9e-72 275.0 203 67.5
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 8.4e-72 274.2 204 68.1
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 1.1e-71 273.9 207 67.1
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 3.2e-71 272.3 203 67.5
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 6.0e-70 268.1 207 65.7
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.0e-69 267.3 201 66.7
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 1.7e-69 266.5 203 66.0
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.7e-69 266.5 204 66.2
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.7e-69 266.5 207 65.2
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 6.6e-69 264.6 207 65.2
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 1.9e-68 263.1 206 65.0
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 1.9e-68 263.1 204 65.2
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 2.5e-68 262.7 205 65.4
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 7.3e-68 261.2 204 65.2
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 9.6e-68 260.8 205 63.9
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 9.6e-68 260.8 206 65.0
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 9.6e-68 260.8 207 63.8
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 9.6e-68 260.8 210 66.7
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 1.3e-67 260.4 205 66.8
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 1.3e-67 260.4 211 64.9
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 1.6e-67 260.0 207 64.3
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 1.6e-67 260.0 215 64.7
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 2.1e-67 259.6 204 64.2
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 3.6e-67 258.8 207 63.8
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 3.6e-67 258.8 203 64.0
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 4.8e-67 258.5 207 65.7
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 6.2e-67 258.1 206 62.6
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 6.2e-67 258.1 202 65.8
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.1e-66 257.3 207 65.2
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 1.1e-66 257.3 204 64.2
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 1.1e-66 257.3 211 64.9
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 1.4e-66 256.9 205 65.4
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 1.8e-66 256.5 211 64.0
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 2.4e-66 256.1 212 64.6
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.4e-66 256.1 202 64.4
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 6.9e-66 254.6 203 64.5
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 2.0e-65 253.1 204 62.3
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 2.0e-65 253.1 209 64.6
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 2.6e-65 252.7 206 61.2
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.5e-65 251.9 204 65.2
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 7.6e-65 251.1 203 61.1
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 7.6e-65 251.1 204 64.7
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.3e-64 250.4 205 62.4
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 1.7e-64 250.0 207 62.8
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 2.2e-64 249.6 206 61.2
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 2.9e-64 249.2 209 66.0
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 3.8e-64 248.8 214 64.0
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 4.9e-64 248.4 205 58.5
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 6.4e-64 248.1 208 61.5
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 6.4e-64 248.1 204 64.7
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 8.4e-64 247.7 203 60.6
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 1.1e-63 247.3 202 60.9
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.1e-63 247.3 214 60.7
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 1.1e-63 247.3 214 59.3
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 1.4e-63 246.9 207 58.9
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.4e-63 246.9 208 65.4
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 1.9e-63 246.5 210 58.6
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.9e-63 246.5 205 60.0
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.4e-63 246.1 204 64.2
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 3.2e-63 245.7 205 59.5
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 4.2e-63 245.4 205 59.0
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 5.4e-63 245.0 211 59.7
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 7.1e-63 244.6 203 60.1
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 9.3e-63 244.2 203 61.6
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 1.6e-62 243.4 207 58.9
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 3.5e-62 242.3 204 58.3
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 6.0e-62 241.5 204 59.3
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 7.9e-62 241.1 202 60.9
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 3.9e-61 238.8 154 74.0
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 5.1e-61 238.4 211 57.3
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.1e-60 237.3 200 58.0
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.1e-60 237.3 200 58.0
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.1e-60 237.3 208 57.2
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.5e-60 236.9 209 57.9
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 1.5e-60 236.9 211 59.7
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 1.5e-60 236.9 206 57.8
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 1.9e-60 236.5 207 58.5
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 5.6e-60 235.0 208 61.1
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 5.6e-60 235.0 184 65.2
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 3.6e-59 232.3 200 58.0
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 9.0e-58 227.6 200 57.5
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.1e-55 220.7 184 62.5
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 5.5e-55 218.4 202 55.9
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 2.7e-54 216.1 209 54.5
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.6e-51 206.8 146 68.5
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 9.0e-50 201.1 184 59.8
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.5e-49 200.3 170 59.4
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 1.5e-49 200.3 152 63.8
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.5e-49 200.3 154 64.3
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 8.4e-48 194.5 136 64.7
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 1.9e-39 166.8 146 56.2
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 5.5e-39 165.2 151 59.6
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 1.6e-38 163.7 178 46.6
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.4e-26 123.2 72 81.9
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-25 119.4 82 72.0
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 7.2e-23 111.7 65 81.5
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 8.8e-21 104.8 58 84.5
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 9.7e-20 101.3 58 82.8
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 1.9e-15 87.0 50 80.0
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 2.1e-14 83.6 50 76.0
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 1.3e-11 74.3 140 37.9
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 6.3e-11 72.0 49 67.3
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 1.9e-07 60.5 52 63.5


User provided reference genes

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