Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR116970 Cardamine hirsuta HOM05D003869 ORTHO05D004718 3.7e-57 224.6 107 100.0
CARHR117220 Cardamine hirsuta HOM05D003869 ORTHO05D004718 9.9e-42 173.3 106 82.1
AL4G15660 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.5e-31 138.3 107 68.2
Carub.0004s0426 Capsella rubella HOM05D003869 ORTHO05D004718 6.0e-31 137.5 104 67.3
AL4G15555 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 6.6e-30 134.0 107 67.3
AL4G18480 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.8e-28 128.6 116 57.8
AL4G18510 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.8e-28 127.9 107 64.5
AL4G15620 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.8e-27 125.9 119 56.3
AL4G14520 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.2e-26 123.2 105 59.0
AL4G18540 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.0e-26 122.5 115 54.8
AL4G14510 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.5e-26 121.3 105 60.0
AL4G15500 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.2e-25 119.0 104 56.7
Thhalv10000198m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 4.9e-25 117.9 106 58.5
CARHR117020 Cardamine hirsuta HOM05D003869 ORTHO05D004718 6.4e-25 117.5 106 56.6
AL4G18550 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.4e-24 115.5 105 58.1
AT2G24250 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 3.2e-24 115.2 110 56.4
BcaC02g08487 Brassica carinata HOM05D003869 ORTHO05D004718 2.1e-23 112.5 108 57.4
BcaC02g08489 Brassica carinata HOM05D003869 ORTHO05D004718 2.1e-23 112.5 109 54.1
C04p53760 Brassica napus HOM05D003869 ORTHO05D004718 2.1e-23 112.5 109 54.1
BolC4t26931H Brassica oleracea HOM05D003869 ORTHO05D004718 2.1e-23 112.5 109 54.1
Carub.0004s0423 Capsella rubella HOM05D003869 ORTHO05D004718 2.7e-23 112.1 106 55.7
Carub.0004s0427 Capsella rubella HOM05D003869 ORTHO05D004718 2.7e-23 112.1 108 50.9
Carub.0004s0433 Capsella rubella HOM05D003869 ORTHO05D004718 3.5e-23 111.7 106 53.8
CARHR116870 Cardamine hirsuta HOM05D003869 ORTHO05D004718 4.6e-23 111.3 105 55.2
AL4G14530 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 6.0e-23 110.9 106 55.7
BolC4t26933H Brassica oleracea HOM05D003869 ORTHO05D004718 7.9e-23 110.5 105 58.1
Carub.0004s0429 Capsella rubella HOM05D003869 ORTHO05D004718 7.9e-23 110.5 103 55.3
BcaC02g08486 Brassica carinata HOM05D003869 ORTHO05D004718 1.3e-22 109.8 106 57.5
AL4G18560 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.8e-22 109.4 108 52.8
BcaC02g08488 Brassica carinata HOM05D003869 ORTHO05D004718 1.8e-22 109.4 105 57.1
A04p18510 Brassica napus HOM05D003869 ORTHO05D004718 1.8e-22 109.4 105 56.2
BolC4t26932H Brassica oleracea HOM05D003869 ORTHO05D004718 1.8e-22 109.4 105 57.1
BraA04t17463Z Brassica rapa HOM05D003869 ORTHO05D004718 1.8e-22 109.4 105 56.2
Carub.0004s0422 Capsella rubella HOM05D003869 ORTHO05D004718 1.8e-22 109.4 106 51.9
A04p19130 Brassica napus HOM05D003869 ORTHO05D004718 2.3e-22 109.0 107 55.1
C04p53780 Brassica napus HOM05D003869 ORTHO05D004718 6.7e-22 107.5 105 57.1
Carub.0004s0353 Capsella rubella HOM05D003869 ORTHO05D004718 6.7e-22 107.5 109 54.1
Sp4g03230 Schrenkiella parvula HOM05D003869 ORTHO05D004718 6.7e-22 107.5 106 52.8
BcaB06g28007 Brassica carinata HOM05D003869 ORTHO05D004718 1.9e-21 105.9 109 53.2
A04p19140 Brassica napus HOM05D003869 ORTHO05D004718 2.5e-21 105.5 107 54.2
BraA04t17514Z Brassica rapa HOM05D003869 ORTHO05D004718 2.5e-21 105.5 107 54.2
Thhalv10000675m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.5e-21 105.5 109 53.2
Carub.0004s0432 Capsella rubella HOM05D003869 ORTHO05D004718 3.3e-21 105.1 106 51.9
Thhalv10000460m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 3.3e-21 105.1 117 48.7
Thhalv10000199m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 4.3e-21 104.8 106 50.0
C04p53770 Brassica napus HOM05D003869 ORTHO05D004718 7.4e-21 104.0 102 56.9
Carub.0004s0420 Capsella rubella HOM05D003869 ORTHO05D004718 9.6e-21 103.6 105 50.5
C04p54520 Brassica napus HOM05D003869 ORTHO05D004718 3.7e-20 101.7 107 51.4
CARHR117880 Cardamine hirsuta HOM05D003869 ORTHO05D004718 6.2e-20 100.9 117 49.6
Carub.0004s0430 Capsella rubella HOM05D003869 ORTHO05D004718 8.1e-20 100.5 102 53.9
A04p18500 Brassica napus HOM05D003869 ORTHO05D004718 1.1e-19 100.1 105 53.3
A04p18540 Brassica napus HOM05D003869 ORTHO05D004718 1.1e-19 100.1 105 53.3
BraA04t17462Z Brassica rapa HOM05D003869 ORTHO05D004718 1.1e-19 100.1 105 53.3
Carub.0004s0354 Capsella rubella HOM05D003869 ORTHO05D004718 1.1e-19 100.1 106 52.8
AT1G64840 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 2.4e-19 99.0 108 51.9
Carub.0004s0357 Capsella rubella HOM05D003869 ORTHO05D004718 3.1e-19 98.6 107 55.1
BcaB06g27998 Brassica carinata HOM05D003869 ORTHO05D004718 4.0e-19 98.2 105 49.5
Thhalv10000166m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 4.0e-19 98.2 117 46.2
A04p19090 Brassica napus HOM05D003869 ORTHO05D004718 6.9e-19 97.4 105 49.5
CARHR116990 Cardamine hirsuta HOM05D003869 ORTHO05D004718 6.9e-19 97.4 115 46.1
CARHR116720 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.2e-18 96.7 84 56.0
BcaC02g08414 Brassica carinata HOM05D003869 ORTHO05D004718 1.5e-18 96.3 107 49.5
BolC4t26995H Brassica oleracea HOM05D003869 ORTHO05D004718 1.5e-18 96.3 107 49.5
BraA04t17507Z Brassica rapa HOM05D003869 ORTHO05D004718 1.5e-18 96.3 105 49.5
CARHR117030 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.0e-18 95.9 104 49.0
BcaB06g28002 Brassica carinata HOM05D003869 ORTHO05D004718 4.5e-18 94.7 103 53.4
Sp4g03710 Schrenkiella parvula HOM05D003869 ORTHO05D004718 4.5e-18 94.7 126 41.3
Sp4g03220 Schrenkiella parvula HOM05D003869 ORTHO05D004718 5.8e-18 94.4 93 52.7
Thhalv10000613m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 7.6e-18 94.0 105 46.7
C03p32370 Brassica napus HOM05D003869 ORTHO05D004718 1.7e-17 92.8 101 46.5
Thhalv10000175m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.7e-17 92.8 105 46.7
BcaB01g02998 Brassica carinata HOM05D003869 ORTHO05D004718 3.8e-17 91.7 108 44.4
BcaB06g28005 Brassica carinata HOM05D003869 ORTHO05D004718 4.9e-17 91.3 108 54.6
A04p19110 Brassica napus HOM05D003869 ORTHO05D004718 1.9e-16 89.4 103 54.4
C04p54430 Brassica napus HOM05D003869 ORTHO05D004718 1.9e-16 89.4 104 51.9
BraA04t17509Z Brassica rapa HOM05D003869 ORTHO05D004718 1.9e-16 89.4 103 54.4
BcaC02g08418 Brassica carinata HOM05D003869 ORTHO05D004718 2.4e-16 89.0 103 54.4
C04p54490 Brassica napus HOM05D003869 ORTHO05D004718 2.4e-16 89.0 103 54.4
CARHR118620 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.4e-16 89.0 105 46.7
BcaB06g28006 Brassica carinata HOM05D003869 ORTHO05D004718 4.2e-16 88.2 102 52.0
CARHR117230 Cardamine hirsuta HOM05D003869 ORTHO05D004718 4.2e-16 88.2 102 48.0
C04p54480 Brassica napus HOM05D003869 ORTHO05D004718 5.5e-16 87.8 110 50.9
A03p26980 Brassica napus HOM05D003869 ORTHO05D004718 7.1e-16 87.4 101 44.6
BraA03t11909Z Brassica rapa HOM05D003869 ORTHO05D004718 2.7e-15 85.5 101 44.6
CARHR117860 Cardamine hirsuta HOM05D003869 ORTHO05D004718 3.5e-15 85.1 85 50.6
BcaC06g33784 Brassica carinata HOM05D003869 ORTHO05D004718 2.3e-14 82.4 103 44.7
C07p36960 Brassica napus HOM05D003869 ORTHO05D004718 2.3e-14 82.4 103 44.7
BolC4t26993H Brassica oleracea HOM05D003869 ORTHO05D004718 2.3e-14 82.4 102 52.0
BolC7t44209H Brassica oleracea HOM05D003869 ORTHO05D004718 2.3e-14 82.4 103 44.7
BcaB06g28001 Brassica carinata HOM05D003869 ORTHO05D004718 3.0e-14 82.0 105 44.8
A06p40890 Brassica napus HOM05D003869 ORTHO05D004718 1.1e-13 80.1 103 43.7
BraA06t27011Z Brassica rapa HOM05D003869 ORTHO05D004718 1.1e-13 80.1 103 43.7
CARHR116710 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.5e-13 79.7 51 72.5
AL4G18570 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.4e-13 77.4 108 43.5
A04p19120 Brassica napus HOM05D003869 ORTHO05D004718 1.6e-12 76.3 108 46.3
Thhalv10000192m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.1e-12 75.9 133 35.3
BcaB01g02713 Brassica carinata HOM05D003869 ORTHO05D004718 1.1e-11 73.6 108 39.8
CARHR116880 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.8e-11 72.8 107 41.1
CARHR116940 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.4e-11 72.4 57 61.4
Carub.0004s0424 Capsella rubella HOM05D003869 ORTHO05D004718 4.0e-11 71.6 116 38.8
BcaC02g08420 Brassica carinata HOM05D003869 ORTHO05D004718 7.6e-10 67.4 56 66.1
BcaC02g08419 Brassica carinata HOM05D003869 ORTHO05D004718 3.8e-09 65.1 62 59.7
BolC4t26992H Brassica oleracea HOM05D003869 ORTHO05D004718 3.8e-09 65.1 62 59.7
Thhalv10019678m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 3.8e-09 65.1 110 35.5
BcaC02g08416 Brassica carinata HOM05D003869 ORTHO05D004718 8.4e-09 63.9 89 49.4
C04p54420 Brassica napus HOM05D003869 ORTHO05D004718 2.5e-08 62.4 85 40.0
A04p18490 Brassica napus HOM05D003869 ORTHO05D004718 5.5e-08 61.2 48 60.4
A04p19070 Brassica napus HOM05D003869 ORTHO05D004718 7.1e-08 60.8 105 38.1
BolC4t26987H Brassica oleracea HOM05D003869 ORTHO05D004718 7.1e-08 60.8 109 35.8
BraA04t17506Z Brassica rapa HOM05D003869 ORTHO05D004718 2.1e-07 59.3 105 38.1
AL4G14540 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.7e-07 58.9 96 43.8
BcaC02g08422 Brassica carinata HOM05D003869 ORTHO05D004718 4.6e-07 58.2 109 34.9
C04p54410 Brassica napus HOM05D003869 ORTHO05D004718 4.6e-07 58.2 109 34.9
AL4G15530 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.9e-07 57.4 40 67.5
CARHR116910 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.3e-06 56.6 54 57.4
AL4G18500 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.3e-06 55.8 38 68.4


User provided reference genes

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