Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR116720 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.4e-121 438.7 208 100.0
AL4G15620 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.6e-54 216.1 158 65.2
AL4G18540 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.5e-54 214.5 160 65.0
Carub.0004s0422 Capsella rubella HOM05D003869 ORTHO05D004718 9.8e-54 214.2 161 60.9
AL4G18560 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.7e-53 212.2 161 61.5
AL4G15660 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.2e-52 209.1 158 65.2
CARHR116870 Cardamine hirsuta HOM05D003869 ORTHO05D004718 3.2e-52 209.1 160 63.1
AL4G18510 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 5.4e-52 208.4 158 65.2
AL4G14520 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.0e-51 206.5 159 64.2
Thhalv10000675m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 4.6e-51 205.3 177 59.3
Carub.0004s0433 Capsella rubella HOM05D003869 ORTHO05D004718 1.3e-50 203.8 160 64.4
Sp4g03220 Schrenkiella parvula HOM05D003869 ORTHO05D004718 2.3e-50 203.0 156 64.7
Carub.0004s0426 Capsella rubella HOM05D003869 ORTHO05D004718 3.9e-50 202.2 154 63.6
Thhalv10000166m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 5.0e-50 201.8 162 60.5
AT2G24250 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 6.6e-50 201.4 159 62.9
AL4G18550 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 8.6e-50 201.1 160 63.8
AL4G14510 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.5e-49 200.3 158 68.4
Carub.0004s0353 Capsella rubella HOM05D003869 ORTHO05D004718 4.3e-49 198.7 164 62.2
CARHR117030 Cardamine hirsuta HOM05D003869 ORTHO05D004718 4.3e-49 198.7 163 58.9
Carub.0004s0420 Capsella rubella HOM05D003869 ORTHO05D004718 7.3e-49 198.0 161 57.1
Thhalv10000198m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.8e-48 196.1 163 62.0
Thhalv10000199m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.8e-48 196.1 161 59.0
A04p19090 Brassica napus HOM05D003869 ORTHO05D004718 8.0e-48 194.5 160 60.0
BcaC02g08489 Brassica carinata HOM05D003869 ORTHO05D004718 1.1e-47 194.1 160 60.0
C04p53760 Brassica napus HOM05D003869 ORTHO05D004718 1.1e-47 194.1 160 60.0
AL4G18480 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.4e-47 193.7 157 62.4
BcaB06g27998 Brassica carinata HOM05D003869 ORTHO05D004718 1.8e-47 193.4 162 59.9
Carub.0004s0432 Capsella rubella HOM05D003869 ORTHO05D004718 1.8e-47 193.4 164 57.9
AL4G18570 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.3e-47 193.0 167 58.1
BraA04t17507Z Brassica rapa HOM05D003869 ORTHO05D004718 2.3e-47 193.0 160 60.6
AL4G15500 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.1e-47 192.6 164 59.1
Sp4g03230 Schrenkiella parvula HOM05D003869 ORTHO05D004718 5.2e-47 191.8 155 62.6
CARHR117020 Cardamine hirsuta HOM05D003869 ORTHO05D004718 8.9e-47 191.0 154 60.4
BolC4t26931H Brassica oleracea HOM05D003869 ORTHO05D004718 1.2e-46 190.7 160 59.4
Carub.0004s0427 Capsella rubella HOM05D003869 ORTHO05D004718 1.2e-46 190.7 161 55.9
AT1G64840 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 4.4e-46 188.7 161 60.2
Carub.0004s0429 Capsella rubella HOM05D003869 ORTHO05D004718 4.4e-46 188.7 165 57.6
CARHR116940 Cardamine hirsuta HOM05D003869 ORTHO05D004718 3.7e-45 185.7 148 62.2
C04p54420 Brassica napus HOM05D003869 ORTHO05D004718 4.9e-45 185.3 151 61.6
A04p19130 Brassica napus HOM05D003869 ORTHO05D004718 2.4e-44 183.0 148 63.5
A04p19140 Brassica napus HOM05D003869 ORTHO05D004718 7.0e-44 181.4 148 63.5
C04p54520 Brassica napus HOM05D003869 ORTHO05D004718 7.0e-44 181.4 148 62.8
BolC4t26932H Brassica oleracea HOM05D003869 ORTHO05D004718 7.0e-44 181.4 174 57.5
BraA04t17514Z Brassica rapa HOM05D003869 ORTHO05D004718 7.0e-44 181.4 148 63.5
BcaB06g28001 Brassica carinata HOM05D003869 ORTHO05D004718 9.2e-44 181.0 158 58.9
BcaC02g08414 Brassica carinata HOM05D003869 ORTHO05D004718 6.0e-43 178.3 148 62.2
BolC4t26995H Brassica oleracea HOM05D003869 ORTHO05D004718 6.0e-43 178.3 148 62.2
Carub.0004s0423 Capsella rubella HOM05D003869 ORTHO05D004718 6.0e-43 178.3 163 57.7
CARHR116990 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.3e-42 176.4 154 57.8
BolC4t26933H Brassica oleracea HOM05D003869 ORTHO05D004718 5.1e-42 175.3 158 60.1
BraA04t17463Z Brassica rapa HOM05D003869 ORTHO05D004718 5.1e-42 175.3 154 61.0
CARHR118620 Cardamine hirsuta HOM05D003869 ORTHO05D004718 5.1e-42 175.3 161 54.0
AL4G14530 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.9e-41 173.3 163 53.4
Thhalv10000613m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.5e-41 172.9 160 55.6
BcaC02g08486 Brassica carinata HOM05D003869 ORTHO05D004718 7.3e-41 171.4 159 59.1
AL4G15555 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.6e-40 169.1 158 56.3
A04p18510 Brassica napus HOM05D003869 ORTHO05D004718 3.6e-40 169.1 150 60.7
BcaC02g08487 Brassica carinata HOM05D003869 ORTHO05D004718 1.4e-39 167.2 152 58.6
CARHR117860 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.4e-39 167.2 158 53.8
C04p53780 Brassica napus HOM05D003869 ORTHO05D004718 2.3e-39 166.4 158 58.9
A04p18540 Brassica napus HOM05D003869 ORTHO05D004718 1.5e-38 163.7 158 57.0
BraA04t17462Z Brassica rapa HOM05D003869 ORTHO05D004718 1.5e-38 163.7 158 57.0
Sp4g03710 Schrenkiella parvula HOM05D003869 ORTHO05D004718 1.5e-38 163.7 161 50.9
BcaB06g28007 Brassica carinata HOM05D003869 ORTHO05D004718 2.0e-38 163.3 149 59.1
Thhalv10000460m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 3.4e-38 162.5 162 52.5
CARHR117220 Cardamine hirsuta HOM05D003869 ORTHO05D004718 7.5e-38 161.4 117 64.1
CARHR117230 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.7e-37 160.2 154 52.6
A04p18500 Brassica napus HOM05D003869 ORTHO05D004718 4.9e-37 158.7 160 56.2
BcaB01g02713 Brassica carinata HOM05D003869 ORTHO05D004718 1.9e-36 156.8 163 51.5
Carub.0004s0430 Capsella rubella HOM05D003869 ORTHO05D004718 2.4e-36 156.4 160 53.8
BolC4t26993H Brassica oleracea HOM05D003869 ORTHO05D004718 7.1e-36 154.8 169 53.3
BcaB06g28005 Brassica carinata HOM05D003869 ORTHO05D004718 1.2e-35 154.1 149 57.0
A04p19110 Brassica napus HOM05D003869 ORTHO05D004718 1.2e-35 154.1 149 58.4
BraA04t17509Z Brassica rapa HOM05D003869 ORTHO05D004718 1.2e-35 154.1 149 58.4
BcaB06g28002 Brassica carinata HOM05D003869 ORTHO05D004718 2.1e-35 153.3 151 54.3
A04p19120 Brassica napus HOM05D003869 ORTHO05D004718 2.1e-35 153.3 148 58.1
C04p54430 Brassica napus HOM05D003869 ORTHO05D004718 2.1e-35 153.3 151 55.0
C04p54480 Brassica napus HOM05D003869 ORTHO05D004718 2.1e-35 153.3 150 54.0
BcaC02g08418 Brassica carinata HOM05D003869 ORTHO05D004718 3.5e-35 152.5 150 57.3
C04p54490 Brassica napus HOM05D003869 ORTHO05D004718 3.5e-35 152.5 149 57.7
BcaC02g08419 Brassica carinata HOM05D003869 ORTHO05D004718 7.8e-35 151.4 132 57.6
BolC4t26992H Brassica oleracea HOM05D003869 ORTHO05D004718 7.8e-35 151.4 132 57.6
BcaB06g28006 Brassica carinata HOM05D003869 ORTHO05D004718 8.6e-34 147.9 153 54.2
C03p32370 Brassica napus HOM05D003869 ORTHO05D004718 8.6e-34 147.9 160 48.1
Carub.0004s0357 Capsella rubella HOM05D003869 ORTHO05D004718 8.6e-34 147.9 156 53.8
Thhalv10019678m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.1e-33 147.5 179 47.5
CARHR117880 Cardamine hirsuta HOM05D003869 ORTHO05D004718 5.6e-33 145.2 118 58.5
A03p26980 Brassica napus HOM05D003869 ORTHO05D004718 2.1e-32 143.3 160 47.5
CARHR116880 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.8e-32 142.9 162 50.0
BcaC02g08420 Brassica carinata HOM05D003869 ORTHO05D004718 3.6e-32 142.5 134 55.2
A04p18490 Brassica napus HOM05D003869 ORTHO05D004718 3.1e-31 139.4 121 56.2
Thhalv10000175m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 4.0e-31 139.0 160 46.9
BcaB01g02998 Brassica carinata HOM05D003869 ORTHO05D004718 1.5e-30 137.1 158 47.5
A04p19070 Brassica napus HOM05D003869 ORTHO05D004718 2.0e-30 136.7 161 45.3
BraA03t11909Z Brassica rapa HOM05D003869 ORTHO05D004718 2.0e-30 136.7 160 46.9
Thhalv10000192m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.6e-30 136.3 179 41.9
AL4G15530 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.4e-30 136.0 110 62.7
BcaC06g33784 Brassica carinata HOM05D003869 ORTHO05D004718 3.4e-30 136.0 163 46.6
C07p36960 Brassica napus HOM05D003869 ORTHO05D004718 3.4e-30 136.0 163 46.6
BolC7t44209H Brassica oleracea HOM05D003869 ORTHO05D004718 3.4e-30 136.0 163 46.6
BraA04t17506Z Brassica rapa HOM05D003869 ORTHO05D004718 4.4e-30 135.6 161 45.3
BcaC02g08422 Brassica carinata HOM05D003869 ORTHO05D004718 1.3e-29 134.0 154 44.8
C04p54410 Brassica napus HOM05D003869 ORTHO05D004718 1.3e-29 134.0 154 44.8
A06p40890 Brassica napus HOM05D003869 ORTHO05D004718 1.7e-29 133.7 163 45.4
BolC4t26990H Brassica oleracea HOM05D003869 ORTHO05D004718 1.7e-29 133.7 113 58.4
BraA06t27011Z Brassica rapa HOM05D003869 ORTHO05D004718 1.7e-29 133.7 163 45.4
Carub.0004s0354 Capsella rubella HOM05D003869 ORTHO05D004718 6.4e-29 131.7 158 48.1
BcaC02g08488 Brassica carinata HOM05D003869 ORTHO05D004718 8.4e-29 131.3 86 74.4
BolC4t26987H Brassica oleracea HOM05D003869 ORTHO05D004718 8.4e-29 131.3 154 44.2
AL4G18500 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.1e-28 131.0 108 60.2
C04p53770 Brassica napus HOM05D003869 ORTHO05D004718 1.9e-28 130.2 158 47.5
CARHR116710 Cardamine hirsuta HOM05D003869 ORTHO05D004718 4.6e-27 125.6 72 80.6
BcaC02g08421 Brassica carinata HOM05D003869 ORTHO05D004718 6.0e-27 125.2 109 56.9
Carub.0004s0424 Capsella rubella HOM05D003869 ORTHO05D004718 4.3e-25 119.0 143 44.8
AL4G14540 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 6.2e-24 115.2 158 45.6
BcaC02g08416 Brassica carinata HOM05D003869 ORTHO05D004718 9.0e-23 111.3 153 45.8
BraA04t17513Z Brassica rapa HOM05D003869 ORTHO05D004718 1.5e-22 110.5 87 60.9
C04p54500 Brassica napus HOM05D003869 ORTHO05D004718 9.3e-20 101.3 88 59.1
CARHR116970 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.0e-18 97.8 84 56.0
BraA04t17508Z Brassica rapa HOM05D003869 ORTHO05D004718 8.7e-18 94.7 90 52.2
CARHR116960 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.1e-17 94.4 88 51.1
AT2G24255 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 7.3e-17 91.7 109 47.7
Carub.0004s0352 Capsella rubella HOM05D003869 ORTHO05D004718 1.3e-16 90.9 88 53.4
A04p19100 Brassica napus HOM05D003869 ORTHO05D004718 4.8e-16 89.0 91 51.6
CARHR116910 Cardamine hirsuta HOM05D003869 ORTHO05D004718 5.3e-15 85.5 61 67.2
BcaC04g23023 Brassica carinata HOM05D003869 ORTHO05D004718 1.6e-11 73.9 148 32.4
A09p10960 Brassica napus HOM05D003869 ORTHO05D004718 2.1e-11 73.6 162 32.7
C09p12950 Brassica napus HOM05D003869 ORTHO05D004718 1.8e-10 70.5 157 29.9
BolC9t54186H Brassica oleracea HOM05D003869 ORTHO05D004718 1.8e-10 70.5 157 29.9
BraA04t17464Z Brassica rapa HOM05D003869 ORTHO05D004718 1.8e-10 70.5 89 47.2
BcaC04g23026 Brassica carinata HOM05D003869 ORTHO05D004718 3.0e-10 69.7 157 32.5
C09p12930 Brassica napus HOM05D003869 ORTHO05D004718 3.0e-10 69.7 157 32.5
BolC9t54184H Brassica oleracea HOM05D003869 ORTHO05D004718 3.0e-10 69.7 157 32.5
BraA09t36735Z Brassica rapa HOM05D003869 ORTHO05D004718 6.7e-10 68.6 174 32.2
Carub.0131s0002 Capsella rubella HOM05D003869 ORTHO05D004718 3.3e-09 66.2 175 28.6
Carub.0003s3004 Capsella rubella HOM05D003869 ORTHO05D004718 4.3e-09 65.9 163 27.6
AL4G15600 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.4e-09 65.1 53 54.7
Carub.0003s3003 Capsella rubella HOM05D003869 ORTHO05D004718 1.3e-08 64.3 176 25.0
AT2G16300 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 3.7e-08 62.8 184 26.6
BcaB07g31773 Brassica carinata HOM05D003869 ORTHO05D004718 3.7e-08 62.8 203 29.6
Carub.0003s3002 Capsella rubella HOM05D003869 ORTHO05D004718 4.8e-08 62.4 179 29.1
AT2G16290 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 6.2e-08 62.0 194 25.3
Carub.0003s3001 Capsella rubella HOM05D003869 ORTHO05D004718 1.4e-07 60.8 179 29.1
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 3.1e-07 59.7 186 25.8
AL4G18490 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 5.3e-07 58.9 100 39.0
Carub.0131s0001 Capsella rubella HOM05D003869 ORTHO05D004718 1.2e-06 57.8 159 27.7


User provided reference genes

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