Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR115690 Cardamine hirsuta HOM05D002302 ORTHO05D012841 2.5e-29 131.3 61 100.0
CARHR258080 Cardamine hirsuta HOM05D002302 ORTHO05D012841 5.7e-26 120.2 61 93.4
CARHR154610 Cardamine hirsuta HOM05D002302 ORTHO05D012841 5.0e-22 107.1 61 86.9
CARHR183690 Cardamine hirsuta HOM05D002302 ORTHO05D012841 1.9e-21 105.1 61 83.6
CARHR287850 Cardamine hirsuta HOM05D002302 ORTHO05D012841 1.6e-20 102.1 61 83.6
CARHR099570 Cardamine hirsuta HOM05D002302 ORTHO05D012841 2.1e-20 101.7 61 83.6
CARHR115620 Cardamine hirsuta HOM05D002302 ORTHO05D012841 3.0e-19 97.8 61 80.3
CARHR215990 Cardamine hirsuta HOM05D002302 ORTHO05D012841 3.0e-19 97.8 61 82.0
CARHR224740 Cardamine hirsuta HOM05D002302 ORTHO05D012841 5.1e-19 97.1 59 78.0
CARHR261530 Cardamine hirsuta HOM05D002302 ORTHO05D012841 1.9e-18 95.1 61 78.7
CARHR039130 Cardamine hirsuta HOM05D002302 ORTHO05D012841 1.4e-16 89.0 61 72.1
CARHR262840 Cardamine hirsuta HOM05D002302 ORTHO05D012841 2.4e-16 88.2 57 77.2
CARHR117590 Cardamine hirsuta HOM05D002302 ORTHO05D012841 2.0e-15 85.1 60 70.0
CARHR217220 Cardamine hirsuta HOM05D002302 ORTHO05D012841 2.0e-15 85.1 57 73.7
CARHR262350 Cardamine hirsuta HOM05D002302 ORTHO05D012841 7.7e-15 83.2 54 72.2
CARHR030230 Cardamine hirsuta HOM05D002302 ORTHO05D012841 2.2e-14 81.6 53 77.4
CARHR215310 Cardamine hirsuta HOM05D002302 ORTHO05D012841 6.5e-14 80.1 48 77.1
CARHR287560 Cardamine hirsuta HOM05D002302 ORTHO05D012841 2.5e-13 78.2 54 72.2
Carub.0003s3381 Capsella rubella HOM05D002302 ORTHO05D002728 3.0e-11 71.2 54 68.5
AL3G48730 Arabidopsis lyrata HOM05D002302 ORTHO05D002728 1.1e-10 69.3 54 66.7
CARHR104730 Cardamine hirsuta HOM05D002302 ORTHO05D012841 9.7e-10 66.2 47 70.2
AT2G19520 Arabidopsis thaliana HOM05D002302 ORTHO05D002728 1.7e-09 65.5 54 64.8
A09p12420 Brassica napus HOM05D002302 ORTHO05D002728 1.4e-08 62.4 57 61.4
BraA09t36887Z Brassica rapa HOM05D002302 ORTHO05D002728 1.4e-08 62.4 57 61.4
BcaC04g22846 Brassica carinata HOM05D002302 ORTHO05D002728 5.3e-08 60.5 55 61.8
C09p14700 Brassica napus HOM05D002302 ORTHO05D002728 5.3e-08 60.5 55 61.8
BolC9t54373H Brassica oleracea HOM05D002302 ORTHO05D002728 5.3e-08 60.5 55 61.8
A09p59290 Brassica napus HOM05D002302 ORTHO05D002728 1.5e-07 58.9 54 59.3
BraA09t41311Z Brassica rapa HOM05D002302 ORTHO05D002728 1.5e-07 58.9 54 59.3
C08p42550 Brassica napus HOM05D002302 ORTHO05D002728 4.5e-07 57.4 49 63.3
BolC8t51816H Brassica oleracea HOM05D002302 ORTHO05D002728 4.5e-07 57.4 49 63.3
Thhalv10022653m.g Eutrema salsugineum HOM05D002302 ORTHO05D002728 5.9e-07 57.0 46 67.4
Sp3g32900 Schrenkiella parvula HOM05D002302 ORTHO05D002728 5.9e-07 57.0 46 67.4
Aa31LG8G16540 Aethionema arabicum HOM05D002302 ORTHO05D002728 2.9e-06 54.7 46 65.2
BcaC07g41249 Brassica carinata HOM05D002302 ORTHO05D002728 2.9e-06 54.7 52 55.8


User provided reference genes

Program Settings