Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR112590 Cardamine hirsuta HOM05D000249 ORTHO05D000206 5.5e-56 220.7 110 100.0
CARHR112900 Cardamine hirsuta HOM05D000249 ORTHO05D000206 6.4e-36 154.1 111 74.8
BraA03t09800Z Brassica rapa HOM05D000249 ORTHO05D000206 1.4e-14 83.2 107 47.7
A03p04600 Brassica napus HOM05D000249 ORTHO05D000206 3.1e-14 82.0 102 49.0
BcaB01g05529 Brassica carinata HOM05D000249 ORTHO05D000206 4.0e-14 81.6 107 47.7
AL3G21160 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.2e-14 81.3 101 52.5
C03p05190 Brassica napus HOM05D000249 ORTHO05D000206 6.9e-14 80.9 102 45.1
BolC3t13036H Brassica oleracea HOM05D000249 ORTHO05D000206 6.9e-14 80.9 102 45.1
BraA03t09802Z Brassica rapa HOM05D000249 ORTHO05D000206 6.9e-14 80.9 96 50.0
AL5G13220 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 9.0e-14 80.5 99 47.5
Carub.0008s1128 Capsella rubella HOM05D000249 ORTHO05D000206 2.0e-13 79.3 102 49.0
AL8G27500 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.4e-13 78.6 101 49.5
Carub.0003s2641 Capsella rubella HOM05D000249 ORTHO05D000206 4.4e-13 78.2 96 47.9
AL3G28900 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.8e-13 77.8 99 49.5
AL5G29830 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.7e-12 76.3 108 48.1
AT5G51250 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 2.2e-12 75.9 96 50.0
Thhalv10026752m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.8e-12 75.1 100 49.0
BcaB01g05525 Brassica carinata HOM05D000249 ORTHO05D000206 6.4e-12 74.3 96 45.8
C03p05170 Brassica napus HOM05D000249 ORTHO05D000206 6.4e-12 74.3 96 45.8
BolC3t13040H Brassica oleracea HOM05D000249 ORTHO05D000206 6.4e-12 74.3 96 45.8
BolSC81t61259H Brassica oleracea HOM05D000249 ORTHO05D000206 6.4e-12 74.3 96 45.8
Thhalv10022428m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 8.4e-12 73.9 93 49.5
AL1G38150 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.1e-11 73.6 99 46.5
AT5G38680 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.1e-11 73.6 99 49.5
Thhalv10027325m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.9e-11 72.8 95 49.5
A05p40040 Brassica napus HOM05D000249 ORTHO05D000206 3.2e-11 72.0 100 46.0
AL7G51860 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.1e-11 70.9 98 46.9
AT2G03460 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 7.1e-11 70.9 103 45.6
Thhalv10027302m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.5e-10 68.6 95 48.4
Thhalv10022355m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 7.8e-10 67.4 106 43.4
AL3G21170 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.0e-09 67.0 101 45.5
Thhalv10021905m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.3e-09 66.6 98 48.0
Thhalv10027065m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.0e-09 65.5 100 46.0
BcaB05g21940 Brassica carinata HOM05D000249 ORTHO05D000206 3.9e-09 65.1 97 45.4
BolC5t34562H Brassica oleracea HOM05D000249 ORTHO05D000206 6.6e-09 64.3 99 43.4
AT3G06570 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 8.7e-09 63.9 99 43.4
BcaC05g29615 Brassica carinata HOM05D000249 ORTHO05D000206 1.1e-08 63.5 101 44.6
BraA05t22913Z Brassica rapa HOM05D000249 ORTHO05D000206 1.1e-08 63.5 100 43.0
CARHR083130 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.1e-08 63.5 100 41.0
AL7G27370 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.5e-08 63.2 102 45.1
BcaC06g33036 Brassica carinata HOM05D000249 ORTHO05D000206 1.5e-08 63.2 102 43.1
BcaC06g33038 Brassica carinata HOM05D000249 ORTHO05D000206 1.5e-08 63.2 102 43.1
AT4G25710 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 2.5e-08 62.4 101 44.6
BraA03t12805Z Brassica rapa HOM05D000249 ORTHO05D000206 3.3e-08 62.0 94 43.6
Carub.0007s3717 Capsella rubella HOM05D000249 ORTHO05D000206 3.3e-08 62.0 98 41.8
BolC5t34588H Brassica oleracea HOM05D000249 ORTHO05D000206 5.6e-08 61.2 97 43.3
BcaB04g20453 Brassica carinata HOM05D000249 ORTHO05D000206 9.6e-08 60.5 98 43.9
BcaC09g49289 Brassica carinata HOM05D000249 ORTHO05D000206 9.6e-08 60.5 99 44.4
A01p31670 Brassica napus HOM05D000249 ORTHO05D000206 9.6e-08 60.5 99 44.4
C01p40530 Brassica napus HOM05D000249 ORTHO05D000206 9.6e-08 60.5 99 44.4
BraA01t03295Z Brassica rapa HOM05D000249 ORTHO05D000206 9.6e-08 60.5 99 44.4
AL1G52750 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.6e-07 59.7 102 38.2
BolC1t04006H Brassica oleracea HOM05D000249 ORTHO05D000206 2.1e-07 59.3 99 43.4
AL7G51870 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.2e-07 57.8 97 43.3
AL1G52760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.4e-06 56.6 102 38.2
BraA06t24494Z Brassica rapa HOM05D000249 ORTHO05D000206 4.0e-06 55.1 110 33.6
A06p13420 Brassica napus HOM05D000249 ORTHO05D000206 5.3e-06 54.7 110 33.6
AL7G11700 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.9e-06 54.3 99 40.4
C03p05240 Brassica napus HOM05D000249 ORTHO05D000206 9.0e-06 53.9 59 44.1
C03p37720 Brassica napus HOM05D000249 ORTHO05D000206 9.0e-06 53.9 111 34.2
BolC3t16061H Brassica oleracea HOM05D000249 ORTHO05D000206 9.0e-06 53.9 111 34.2


User provided reference genes

Program Settings