Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 9.6e-116 420.2 221 100.0
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.2e-72 276.2 223 73.1
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 5.5e-71 271.6 222 73.9
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 3.3e-68 262.3 230 68.3
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.0e-61 240.7 243 61.7
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 2.6e-60 236.1 239 63.2
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 2.7e-57 226.1 225 63.1
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 2.7e-57 226.1 225 63.1
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 3.2e-55 219.2 224 60.7
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 3.2e-55 219.2 226 61.5
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 3.2e-55 219.2 224 60.7
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 4.4e-52 208.8 253 52.6
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 2.7e-49 199.5 245 53.9
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.5e-49 198.7 252 52.0
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 7.7e-49 198.0 228 55.7
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 7.7e-49 198.0 235 54.5
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.3e-48 197.2 235 56.2
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 5.0e-48 195.3 249 52.6
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 1.9e-47 193.4 228 55.7
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.2e-46 190.7 251 53.4
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 4.7e-46 188.7 228 55.3
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 4.7e-46 188.7 228 55.3
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 4.0e-45 185.7 251 50.6
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.6e-44 183.0 242 50.8
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.8e-37 160.2 237 46.0
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 8.9e-37 157.9 222 47.3
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.5e-36 157.1 107 74.8
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 2.0e-36 156.8 109 74.3
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 4.4e-36 155.6 115 71.3
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 4.4e-36 155.6 107 72.9
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 5.7e-36 155.2 201 49.3
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 1.3e-35 154.1 100 77.0
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 1.3e-35 154.1 171 53.8
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.9e-35 152.9 107 72.0
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 3.7e-35 152.5 109 73.4
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 3.7e-35 152.5 99 79.8
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 3.7e-35 152.5 257 42.4
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 6.4e-35 151.8 238 45.0
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 1.1e-34 151.0 180 54.4
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.4e-34 150.6 227 46.3
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 3.2e-34 149.4 102 73.5
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 5.4e-34 148.7 225 46.2
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 5.4e-34 148.7 228 45.2
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 5.4e-34 148.7 188 50.0
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 5.4e-34 148.7 109 71.6
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 9.2e-34 147.9 251 41.0
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 9.2e-34 147.9 99 76.8
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 2.0e-33 146.7 143 58.7
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 2.7e-33 146.4 136 58.8
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 3.5e-33 146.0 215 46.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 3.5e-33 146.0 119 68.1
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 4.6e-33 145.6 140 59.3
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 5.9e-33 145.2 99 76.8
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 5.9e-33 145.2 239 41.8
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 1.3e-32 144.1 109 68.8
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.7e-32 143.7 168 51.8
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 2.3e-32 143.3 209 47.8
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 3.0e-32 142.9 223 45.7
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 3.0e-32 142.9 229 46.7
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 3.9e-32 142.5 99 74.7
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 6.6e-32 141.7 141 58.2
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 6.6e-32 141.7 99 73.7
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 8.6e-32 141.4 102 71.6
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 8.6e-32 141.4 226 45.1
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 1.1e-31 141.0 121 66.1
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.9e-31 140.2 99 72.7
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.9e-31 140.2 125 60.8
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.5e-31 139.8 221 44.8
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 3.3e-31 139.4 144 58.3
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 3.3e-31 139.4 137 60.6
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 5.6e-31 138.7 209 47.8
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.2e-30 137.5 128 60.9
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 2.1e-30 136.7 99 68.7
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 2.1e-30 136.7 99 73.7
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 2.1e-30 136.7 181 48.6
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.1e-30 136.7 172 51.2
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 2.8e-30 136.3 111 65.8
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 4.7e-30 135.6 163 52.8
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 4.7e-30 135.6 225 42.7
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 4.7e-30 135.6 234 42.3
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 6.2e-30 135.2 102 71.6
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 6.2e-30 135.2 104 67.3
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.2e-30 135.2 149 55.7
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.0e-29 134.4 141 60.3
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.4e-29 134.0 138 55.1
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.8e-29 133.7 149 55.0
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.8e-29 133.7 149 55.0
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.8e-29 133.7 149 55.0
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.8e-29 133.7 99 68.7
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 2.3e-29 133.3 141 53.9
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 3.1e-29 132.9 188 45.2
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 4.0e-29 132.5 102 70.6
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 5.2e-29 132.1 138 55.1
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 6.8e-29 131.7 131 60.3
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.2e-28 131.0 201 44.3
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.2e-28 131.0 102 65.7
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.5e-28 130.6 145 51.7
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.5e-28 130.6 99 66.7
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.0e-28 130.2 220 44.1
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 2.2e-27 126.7 196 42.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 2.2e-27 126.7 157 49.7
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.6e-25 120.6 97 63.9
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.4e-21 107.5 188 45.7
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.0e-16 91.3 164 37.2
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.7e-16 90.5 63 76.2
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.3e-16 90.1 113 48.7
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 4.3e-15 85.9 55 72.7
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.8e-14 83.2 97 47.4
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 4.0e-13 79.3 99 43.4
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 5.2e-13 79.0 98 41.8
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-11 74.3 51 74.5
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-11 74.3 51 74.5
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-11 74.3 52 73.1
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.3e-11 74.3 51 74.5
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.8e-11 72.8 52 71.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 6.4e-11 72.0 52 71.2
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.4e-11 71.6 50 74.0
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.4e-10 70.9 50 72.0
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 4.1e-10 69.3 55 70.9
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.6e-09 67.4 67 56.7
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 3.0e-08 63.2 78 42.3


User provided reference genes

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