Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR108140 Cardamine hirsuta HOM05D001076 ORTHO05D014995 1.8e-59 232.3 108 100.0
BolC9t54250H Brassica oleracea HOM05D001076 ORTHO05D014995 9.7e-13 77.0 102 45.1
BcaC04g22945 Brassica carinata HOM05D001076 ORTHO05D014995 3.7e-12 75.1 102 44.1
BraA09t36798Z Brassica rapa HOM05D001076 ORTHO05D014995 1.2e-10 70.1 101 42.6
C09p13590 Brassica napus HOM05D001076 ORTHO05D014995 1.6e-10 69.7 123 36.6
Carub.0007s0434 Capsella rubella HOM05D001076 ORTHO05D001603 4.5e-10 68.2 124 42.7
Aa31LG6G12840 Aethionema arabicum HOM05D001076 ORTHO05D001603 2.9e-09 65.5 128 39.8
Carub.0003s3190 Capsella rubella HOM05D001076 ORTHO05D014995 5.0e-09 64.7 105 44.8
A03p63920 Brassica napus HOM05D001076 ORTHO05D001603 7.2e-08 60.8 123 39.0
BraA03t15461Z Brassica rapa HOM05D001076 ORTHO05D001603 7.2e-08 60.8 123 39.0
BcaB07g31708 Brassica carinata HOM05D001076 ORTHO05D014995 9.4e-08 60.5 134 33.6
Sp7g33670 Schrenkiella parvula HOM05D001076 ORTHO05D001603 1.6e-07 59.7 127 40.9
C07p61390 Brassica napus HOM05D001076 ORTHO05D001603 2.7e-07 58.9 124 39.5
Thhalv10024905m.g Eutrema salsugineum HOM05D001076 ORTHO05D001603 2.7e-07 58.9 127 39.4
BolC7t46565H Brassica oleracea HOM05D001076 ORTHO05D001603 3.6e-07 58.5 124 39.5
BraA01t00265Z Brassica rapa HOM05D001076 ORTHO05D001603 3.6e-07 58.5 123 41.5
AL7G15160 Arabidopsis lyrata HOM05D001076 ORTHO05D001603 4.7e-07 58.2 129 39.5
BcaNung05056 Brassica carinata HOM05D001076 ORTHO05D001603 1.8e-06 56.2 128 38.3
A01p02820 Brassica napus HOM05D001076 ORTHO05D001603 1.8e-06 56.2 124 40.3
BcaNung00785 Brassica carinata HOM05D001112 ORTHO05D000996 2.3e-06 55.8 120 40.8
C01p03150 Brassica napus HOM05D001076 ORTHO05D001603 2.3e-06 55.8 120 40.8
BolC1t00300H Brassica oleracea HOM05D001076 ORTHO05D001603 2.3e-06 55.8 120 40.8
BcaB07g31706 Brassica carinata HOM05D001076 ORTHO05D014995 4.0e-06 55.1 144 35.4
AT4G35890 Arabidopsis thaliana HOM05D001076 ORTHO05D001603 6.7e-06 54.3 118 35.6


User provided reference genes

Program Settings