Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR106520 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.7e-34 148.7 71 100.0
CARHR258710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.2e-29 131.7 71 90.1
AL8G16310 Arabidopsis lyrata HOM05D000214 ORTHO05D000131 8.3e-21 103.2 67 71.6
CANSAT78G2008 Cannabis sativa HOM05D000214 ORTHO05D000131 9.2e-20 99.8 65 72.3
CANSAT01G2145 Cannabis sativa HOM05D000214 ORTHO05D000131 1.0e-18 96.3 65 69.2
COL.COLO4_35650 Corchorus olitorius HOM05D000214 ORTHO05D000131 1.7e-18 95.5 65 67.7
Atru.chr13.1768 Acer truncatum HOM05D000214 ORTHO05D000131 3.0e-18 94.7 65 67.7
Atru.chr4.1207 Acer truncatum HOM05D000214 ORTHO05D000131 5.1e-18 94.0 65 66.2
Atru.chr4.1137 Acer truncatum HOM05D000214 ORTHO05D000131 6.6e-18 93.6 64 67.2
COL.COLO4_33403 Corchorus olitorius HOM05D000214 ORTHO05D000131 4.3e-17 90.9 65 64.6
AT3G22935 Arabidopsis thaliana HOM05D000214 ORTHO05D000131 7.3e-17 90.1 65 66.2
CANSAT64G1031 Cannabis sativa HOM05D000214 ORTHO05D000131 9.5e-17 89.7 62 67.7
Atru.chr13.1769 Acer truncatum HOM05D000214 ORTHO05D000131 1.6e-16 89.0 65 64.6
COL.COLO4_32186 Corchorus olitorius HOM05D000214 ORTHO05D000131 1.6e-16 89.0 65 63.1
PGSC0003DMG400020281 Solanum tuberosum HOM05D000214 ORTHO05D000131 3.6e-16 87.8 70 60.0
Atru.chr11.447 Acer truncatum HOM05D000214 ORTHO05D000131 6.2e-16 87.0 65 61.5
Atru.chr12.1070 Acer truncatum HOM05D000214 ORTHO05D000131 6.2e-16 87.0 66 59.1
CANSAT64G0191 Cannabis sativa HOM05D000214 ORTHO05D000131 6.2e-16 87.0 59 72.9
Atru.chr6.861 Acer truncatum HOM05D000214 ORTHO05D000131 8.1e-16 86.7 65 61.5
Atru.chr4.226 Acer truncatum HOM05D000214 ORTHO05D000131 1.4e-15 85.9 65 60.0
Atru.chr3.1638 Acer truncatum HOM05D000214 ORTHO05D000131 2.3e-15 85.1 65 63.1
Oeu033031.1 Olea europaea HOM05D000214 ORTHO05D000131 2.3e-15 85.1 66 56.1
RcHm_v2.0_Chr4g0404131 Rosa chinensis HOM05D000214 ORTHO05D000131 5.2e-15 84.0 65 60.0
Atru.chr11.100 Acer truncatum HOM05D000214 ORTHO05D000131 8.9e-15 83.2 65 60.0
Atru.chr11.1167 Acer truncatum HOM05D000214 ORTHO05D000131 1.2e-14 82.8 65 61.5
Oeu064191.1 Olea europaea HOM05D000214 ORTHO05D000131 9.9e-14 79.7 66 53.0
Oeu011660.1 Olea europaea HOM05D000214 ORTHO05D000131 8.3e-13 76.6 61 57.4
BolC4t23890H Brassica oleracea HOM05D000214 ORTHO05D000131 2.4e-12 75.1 65 55.4
CSS0009917 Camellia sinensis var. sinensis HOM05D000214 ORTHO05D000131 2.4e-12 75.1 66 54.5
Atru.chr4.404 Acer truncatum HOM05D000214 ORTHO05D000131 4.1e-12 74.3 60 58.3
Atru.chr10.1039 Acer truncatum HOM05D000214 ORTHO05D000131 9.2e-12 73.2 59 55.9
Oeu040344.1 Olea europaea HOM05D000214 ORTHO05D000131 6.0e-11 70.5 66 48.5
Atru.chr1.504 Acer truncatum HOM05D000214 ORTHO05D000131 1.7e-10 68.9 60 56.7
FAN28G0005 Fragaria x ananassa HOM05D000214 ORTHO05D000131 3.9e-10 67.8 61 52.5
Atru.chr10.189 Acer truncatum HOM05D000214 ORTHO05D000131 6.6e-10 67.0 53 62.3
Atru.chr5.2879 Acer truncatum HOM05D000214 ORTHO05D000131 1.5e-09 65.9 53 60.4
CANSAT35G1106 Cannabis sativa HOM05D000214 ORTHO05D000131 2.5e-09 65.1 47 70.2
CANSAT25G1277 Cannabis sativa HOM05D000214 ORTHO05D000131 4.3e-09 64.3 52 59.6
Atru.chr8.365 Acer truncatum HOM05D000214 ORTHO05D000131 1.2e-08 62.8 53 56.6
Atru.chr12.1068 Acer truncatum HOM05D000214 ORTHO05D000131 3.6e-08 61.2 57 50.9
FAN15G1980 Fragaria x ananassa HOM05D000214 ORTHO05D000131 6.2e-08 60.5 61 45.9
Atru.chr12.1927 Acer truncatum HOM05D000214 ORTHO05D000131 1.4e-07 59.3 50 58.0
Atru.chr12.1935 Acer truncatum HOM05D000214 ORTHO05D000131 1.4e-07 59.3 50 58.0
Ciclev10017509m.g Citrus clementina HOM05D000214 ORTHO05D000131 1.8e-07 58.9 53 54.7
Atru.chr4.831 Acer truncatum HOM05D000214 ORTHO05D000131 5.2e-07 57.4 51 54.9


User provided reference genes

Program Settings