Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 1.7e-243 845.5 399 100.0
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 2.5e-199 698.7 359 90.3
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 3.6e-198 694.9 359 88.6
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 6.9e-197 690.6 359 88.6
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 1.2e-196 689.9 359 88.3
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 4.4e-196 688.0 357 88.2
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 5.3e-189 664.5 359 84.4
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 3.2e-186 655.2 359 83.3
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 4.2e-186 654.8 359 83.3
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 2.7e-185 652.1 350 83.7
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 3.5e-185 651.7 359 83.0
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 6.0e-185 651.0 359 82.7
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 1.3e-184 649.8 359 82.7
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 2.0e-180 636.0 358 80.2
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.0e-171 607.1 358 76.5
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 8.4e-171 604.0 374 74.1
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.9e-170 602.8 351 75.8
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 1.6e-169 599.7 350 76.0
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 2.1e-169 599.4 356 75.6
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 2.7e-169 599.0 355 75.2
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 4.6e-169 598.2 357 75.6
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 4.6e-169 598.2 357 75.6
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 4.6e-169 598.2 350 74.3
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 6.1e-169 597.8 357 73.9
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 3.9e-168 595.1 349 75.6
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 3.9e-168 595.1 355 73.8
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 5.1e-168 594.7 357 73.4
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 5.1e-168 594.7 351 74.1
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 8.7e-168 594.0 352 75.9
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.1e-167 593.6 378 69.8
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 5.7e-167 591.3 357 73.9
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 7.4e-167 590.9 351 74.6
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 9.7e-167 590.5 357 73.1
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 1.3e-166 590.1 371 72.0
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 2.8e-166 589.0 378 68.8
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 3.7e-166 588.6 351 75.5
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 4.8e-166 588.2 380 69.7
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.1e-165 587.0 366 71.9
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 1.1e-165 587.0 353 74.8
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.4e-165 586.6 349 74.5
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 2.4e-165 585.9 351 74.6
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 3.1e-165 585.5 353 72.2
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 4.1e-165 585.1 375 70.7
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 4.1e-165 585.1 347 75.2
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 5.3e-165 584.7 349 73.6
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.2e-164 583.6 352 73.0
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.2e-164 583.6 352 73.0
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 1.2e-164 583.6 349 73.1
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.2e-164 583.6 349 74.2
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.5e-164 583.2 375 70.7
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.5e-164 583.2 349 73.1
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 3.4e-164 582.0 346 75.4
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 4.5e-164 581.6 346 73.7
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 4.5e-164 581.6 349 73.4
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 5.9e-164 581.3 349 74.2
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.0e-163 580.5 352 73.6
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.3e-163 580.1 349 73.9
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 1.7e-163 579.7 352 73.6
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.9e-163 578.9 352 73.6
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 2.9e-163 578.9 350 73.1
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 3.8e-163 578.6 349 73.1
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 8.5e-163 577.4 394 66.8
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 8.5e-163 577.4 349 73.1
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 8.5e-163 577.4 349 73.6
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.4e-162 576.6 352 72.7
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 3.2e-162 575.5 381 67.2
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 4.2e-162 575.1 353 73.4
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 7.2e-162 574.3 357 71.4
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 9.4e-162 573.9 349 73.6
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 1.6e-161 573.2 349 72.2
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 2.1e-161 572.8 349 72.2
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.1e-161 572.8 349 70.8
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.1e-161 572.8 349 70.8
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.1e-161 572.8 339 74.9
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 2.1e-161 572.8 351 73.5
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.6e-161 571.6 349 70.8
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 6.1e-161 571.2 350 71.4
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 6.1e-161 571.2 376 66.8
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 6.1e-161 571.2 354 71.8
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 6.1e-161 571.2 353 71.7
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 7.9e-161 570.9 349 70.8
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 1.0e-160 570.5 349 72.5
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 1.0e-160 570.5 349 70.5
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 1.8e-160 569.7 349 71.6
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 2.3e-160 569.3 346 72.8
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 3.9e-160 568.5 364 70.9
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 2.0e-159 566.2 367 69.5
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 2.0e-159 566.2 353 71.4
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 5.7e-159 564.7 357 70.6
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 9.7e-159 563.9 371 67.7
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.8e-158 562.4 353 71.4
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 2.8e-158 562.4 352 69.6
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 8.2e-158 560.8 335 73.4
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.8e-157 559.7 349 71.1
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 9.1e-157 557.4 349 70.8
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 1.5e-156 556.6 352 69.0
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.5e-156 556.6 400 62.8
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 5.9e-156 554.7 354 70.3
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 5.0e-155 551.6 351 70.9
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 6.5e-155 551.2 349 71.3
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 5.5e-154 548.1 351 68.7
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 2.6e-151 539.3 351 68.7
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 3.3e-151 538.9 325 73.8
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 7.0e-149 531.2 348 66.7
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 3.8e-147 525.4 355 65.6
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 7.2e-146 521.2 361 64.8
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 9.4e-146 520.8 381 63.5
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.4e-144 516.9 353 64.9
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.4e-144 516.9 355 64.8
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.4e-144 516.9 357 65.0
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.1e-143 513.8 352 68.5
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 2.5e-138 496.1 284 76.1
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 3.2e-138 495.7 284 74.6
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 3.7e-134 482.3 344 61.0
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 4.1e-133 478.8 343 61.2
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 7.7e-132 474.6 346 60.1
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.1e-129 466.5 354 61.6
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.2e-127 460.7 348 61.5
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.1e-113 413.3 323 60.7
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 5.6e-98 362.1 215 73.0
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 2.8e-97 359.8 212 73.6
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.2e-95 354.4 354 50.6
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 5.4e-93 345.5 210 72.9
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 5.6e-90 335.5 285 54.7
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.1e-58 231.5 183 60.7
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.8e-51 207.6 326 40.8
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.0e-26 124.4 96 56.2
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 4.4e-26 123.2 81 69.1
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.8e-24 117.9 58 84.5
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.5e-18 98.2 113 46.9
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 1.4e-08 65.1 75 50.7


User provided reference genes

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