Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR102670 Cardamine hirsuta HOM05D000003 ORTHO05D000007 3.0e-72 275.0 133 100.0
BcaC09g49796 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-36 156.8 173 50.3
BcaC06g35660 Brassica carinata HOM05D000003 ORTHO05D000007 2.9e-35 152.1 174 50.0
BcaC02g10458 Brassica carinata HOM05D000003 ORTHO05D000007 1.1e-34 150.2 172 48.3
BcaNung01764 Brassica carinata HOM05D000003 ORTHO05D000007 1.5e-34 149.8 170 48.2
BcaB03g16081 Brassica carinata HOM05D000003 ORTHO05D000007 1.9e-34 149.4 173 49.7
BcaB06g27222 Brassica carinata HOM05D000003 ORTHO05D000007 2.5e-34 149.1 169 47.3
BcaC08g42832 Brassica carinata HOM05D000003 ORTHO05D000007 3.2e-34 148.7 158 50.6
C03p14460 Brassica napus HOM05D000003 ORTHO05D000007 3.2e-34 148.7 167 47.9
BcaNung02476 Brassica carinata HOM05D000003 ORTHO05D000007 4.2e-34 148.3 164 49.4
Aa31sc194G20 Aethionema arabicum HOM05D000003 ORTHO05D000007 2.7e-33 145.6 157 49.0
BcaC01g03101 Brassica carinata HOM05D000003 ORTHO05D000007 6.8e-32 141.0 140 52.1
BcaB06g26466 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-31 140.2 153 47.7
BcaC04g23382 Brassica carinata HOM05D000003 ORTHO05D000007 1.3e-30 136.7 153 48.4
BcaC01g03606 Brassica carinata HOM05D000003 ORTHO05D000007 3.7e-30 135.2 134 50.7
AT2G01050 Arabidopsis thaliana HOM05D000003 ORTHO05D000007 6.3e-30 134.4 151 49.0
BcaC04g20731 Brassica carinata HOM05D000003 ORTHO05D000007 6.3e-30 134.4 141 51.8
BcaC07g41976 Brassica carinata HOM05D000003 ORTHO05D000007 7.0e-29 131.0 162 43.8
CARHR114800 Cardamine hirsuta HOM05D000003 ORTHO05D000007 2.7e-28 129.0 102 62.7
BcaC09g50402 Brassica carinata HOM05D000003 ORTHO05D000007 6.5e-27 124.4 159 44.7
BcaC09g48587 Brassica carinata HOM05D000003 ORTHO05D000007 1.1e-26 123.6 133 51.1
BcaC01g05304 Brassica carinata HOM05D000003 ORTHO05D000007 9.4e-26 120.6 152 43.4
BcaC01g01499 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-25 119.8 142 45.1
BcaC04g19511 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-25 119.8 140 46.4
BcaC04g18820 Brassica carinata HOM05D000003 ORTHO05D000007 9.1e-21 104.0 118 44.1
BcaC05g25701 Brassica carinata HOM05D000003 ORTHO05D000007 6.6e-19 97.8 134 44.0
BcaB01g05509 Brassica carinata HOM05D000003 ORTHO05D000007 2.5e-18 95.9 117 47.9
BcaC01g01936 Brassica carinata HOM05D000003 ORTHO05D000007 3.3e-18 95.5 106 50.0
CARHR054110 Cardamine hirsuta HOM05D000003 ORTHO05D000007 7.2e-18 94.4 143 42.0
BcaNung05752 Brassica carinata HOM05D000003 ORTHO05D000007 1.8e-16 89.7 138 40.6
CARHR054690 Cardamine hirsuta HOM05D000003 ORTHO05D000007 2.8e-14 82.4 59 64.4
BcaC02g10938 Brassica carinata HOM05D000003 ORTHO05D000007 3.7e-14 82.0 92 46.7
CARHR054680 Cardamine hirsuta HOM05D000003 ORTHO05D000007 3.2e-13 79.0 62 59.7
CARHR181920 Cardamine hirsuta HOM05D000003 ORTHO05D000007 3.2e-13 79.0 58 63.8
BcaC01g02605 Brassica carinata HOM05D000003 ORTHO05D000007 5.2e-08 61.6 31 83.9
BcaC08g46153 Brassica carinata HOM05D000003 ORTHO05D000007 8.9e-08 60.8 31 87.1
CARHR100990 Cardamine hirsuta HOM05D000003 ORTHO05D000007 2.0e-07 59.7 74 47.3
THA.LOC104799464 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 2.6e-07 59.3 133 26.3
BcaC04g22391 Brassica carinata HOM05D000003 ORTHO05D000007 4.4e-07 58.5 31 80.6
BcaC04g22140 Brassica carinata HOM05D000003 ORTHO05D000007 2.2e-06 56.2 31 77.4
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-06 56.2 96 29.2
CARHR101000 Cardamine hirsuta HOM05D000003 ORTHO05D000007 4.9e-06 55.1 31 71.0
C02p40130 Brassica napus HOM05D000327 ORTHO05D000007 6.4e-06 54.7 84 38.1
BcaB01g01793 Brassica carinata HOM05D000003 ORTHO05D000007 8.3e-06 54.3 31 77.4
Lj3g0024062 Lotus japonicus HOM05D000003 ORTHO05D000007 8.3e-06 54.3 92 33.7


User provided reference genes

Program Settings