Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR101880 Cardamine hirsuta HOM05D000896 ORTHO05D000594 1.2e-125 453.4 255 100.0
CARHR101530 Cardamine hirsuta HOM05D000896 ORTHO05D000594 3.5e-61 239.2 247 65.2
AL3G40610 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 3.2e-46 189.5 249 54.6
AL3G40940 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.5e-43 179.9 248 50.0
AT5G24050 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 7.3e-43 178.3 251 50.6
AL3G40220 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 6.8e-41 171.8 250 50.8
AT3G24850 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 3.9e-36 156.0 253 53.0
Carub.0003s2555 Capsella rubella HOM05D000896 ORTHO05D000594 1.5e-32 144.1 248 44.8
CARHR101580 Cardamine hirsuta HOM05D000896 ORTHO05D000594 7.6e-24 115.2 81 76.5
AL26U10040 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 4.3e-19 99.4 113 54.9
BcaB07g31212 Brassica carinata HOM05D000896 ORTHO05D000594 5.6e-19 99.0 257 34.6
AL7G52070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.8e-18 96.7 287 33.1
AL7G52080 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 4.0e-17 92.8 278 33.8
A09p17570 Brassica napus HOM05D000896 ORTHO05D000594 2.0e-16 90.5 255 32.2
AT5G38490 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.0e-15 88.2 274 35.8
BcaC04g22224 Brassica carinata HOM05D000896 ORTHO05D000594 1.3e-15 87.8 254 31.9
BraA09t37387Z Brassica rapa HOM05D000896 ORTHO05D000594 6.5e-15 85.5 257 32.3
BolC9t55092H Brassica oleracea HOM05D000896 ORTHO05D000594 3.2e-14 83.2 230 37.0
AT1G32030 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 3.5e-13 79.7 218 35.3
C09p21870 Brassica napus HOM05D000896 ORTHO05D000594 5.1e-12 75.9 255 31.8
AL1G46070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 8.7e-12 75.1 213 34.3
Thhalv10029259m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 4.3e-11 72.8 232 32.8
BcaB07g32861 Brassica carinata HOM05D000896 ORTHO05D000594 5.7e-11 72.4 257 34.2
AT5G38500 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 9.6e-11 71.6 255 34.9
BolC1t01330H Brassica oleracea HOM05D000896 ORTHO05D000594 2.0e-08 63.9 217 32.3
CARHR005450 Cardamine hirsuta HOM05D000896 ORTHO05D000594 2.2e-07 60.5 240 29.6
A09p34210 Brassica napus HOM05D000896 ORTHO05D000594 5.0e-07 59.3 229 30.6
BraA09t38969Z Brassica rapa HOM05D000896 ORTHO05D000594 5.0e-07 59.3 229 30.6
AT3G49610 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 6.5e-07 58.9 149 38.3
Carub.0322s0001 Capsella rubella HOM05D000896 ORTHO05D000594 1.1e-06 58.2 126 39.7
Thhalv10029469m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.5e-06 57.0 216 30.6
SpUn1102_0010 Schrenkiella parvula HOM05D000896 ORTHO05D000594 2.5e-06 57.0 76 44.7
BcaC05g27223 Brassica carinata HOM05D000896 ORTHO05D000594 3.2e-06 56.6 270 30.7
Carub.0007s1353 Capsella rubella HOM05D000896 ORTHO05D000594 4.2e-06 56.2 66 50.0
Thhalv10029471m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 4.2e-06 56.2 222 33.3
C05p31330 Brassica napus HOM05D000896 ORTHO05D000594 7.2e-06 55.5 270 30.0
Thhalv10029136m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 9.3e-06 55.1 217 37.8


User provided reference genes

Program Settings