Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 5.5e-39 163.7 75 100.0
CARHR101490 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.4e-21 105.9 72 69.4
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 2.4e-18 95.1 73 65.8
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 8.5e-16 86.7 73 63.0
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 4.2e-15 84.3 74 55.4
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 9.4e-15 83.2 72 58.3
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.6e-14 82.4 73 61.6
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 3.6e-14 81.3 71 52.1
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 6.1e-14 80.5 73 53.4
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 6.1e-14 80.5 73 54.8
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.4e-13 79.3 74 52.7
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.0e-13 77.8 73 50.7
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 4.0e-13 77.8 70 54.3
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 4.0e-13 77.8 70 54.3
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 6.8e-13 77.0 70 54.3
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 6.8e-13 77.0 70 54.3
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 6.8e-13 77.0 70 54.3
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.2e-12 76.3 71 52.1
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.2e-12 76.3 73 50.7
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.5e-12 75.9 73 50.7
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.0e-12 75.5 73 49.3
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.6e-12 75.1 73 52.1
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.4e-12 74.3 74 51.4
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.7e-12 73.9 73 49.3
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 1.7e-11 72.4 73 47.9
Sp3g22760 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.8e-11 71.6 58 56.9
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.8e-11 71.6 74 51.4
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 3.7e-11 71.2 54 57.4
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 6.3e-11 70.5 72 47.2
CARHR105300 Cardamine hirsuta HOM05D008462 ORTHO05D010511 8.3e-11 70.1 43 65.1
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 3.1e-10 68.2 66 51.5
Eucgr.E01762 Eucalyptus grandis HOM05D009215 ORTHO05D010511 2.0e-09 65.5 69 46.4
THA.LOC109116491 Tarenaya hassleriana HOM05D008462 ORTHO05D010511 2.7e-09 65.1 46 58.7
BcaB07g31637 Brassica carinata HOM05D008462 ORTHO05D010511 3.5e-09 64.7 70 45.7
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 3.5e-09 64.7 69 46.4
Eucgr.L02597 Eucalyptus grandis HOM05D009215 ORTHO05D010511 1.0e-08 63.2 69 46.4
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 1.3e-08 62.8 74 43.2
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 1.3e-08 62.8 74 43.2
Eucgr.L02598 Eucalyptus grandis HOM05D009215 ORTHO05D010511 1.3e-08 62.8 69 44.9
BcaC04g22878 Brassica carinata HOM05D008462 ORTHO05D010511 2.2e-08 62.0 72 44.4
C09p14320 Brassica napus HOM05D008462 ORTHO05D010511 2.2e-08 62.0 72 44.4
BolC9t54335H Brassica oleracea HOM05D008462 ORTHO05D010511 2.2e-08 62.0 72 44.4
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.9e-08 61.6 74 41.9
BcaC09g48311 Brassica carinata HOM05D023045 ORTHO05D024329 6.5e-08 60.5 75 42.7
BolC1t05106H Brassica oleracea HOM05D023045 ORTHO05D024329 6.5e-08 60.5 75 42.7
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 8.5e-08 60.1 74 41.9
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 1.5e-07 59.3 69 46.4
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 1.5e-07 59.3 71 45.1
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 3.2e-07 58.2 69 46.4
Gohir.A03G013100 Gossypium hirsutum HOM05D009215 ORTHO05D010851 3.2e-07 58.2 76 46.1
BcaB04g21014 Brassica carinata HOM05D023045 ORTHO05D024329 4.2e-07 57.8 71 40.8
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 4.2e-07 57.8 69 44.9
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 4.2e-07 57.8 69 44.9
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 9.4e-07 56.6 69 44.9
Cpa.g.sc8.114 Carica papaya HOM05D018895 ORTHO05D010851 1.2e-06 56.2 63 42.9
FvH4_5g26840 Fragaria vesca HOM05D009215 ORTHO05D010851 1.6e-06 55.8 77 37.7
FAN08G3126 Fragaria x ananassa HOM05D009215 ORTHO05D010851 1.6e-06 55.8 77 36.4
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 3.6e-06 54.7 69 46.4
BolC7t45509H Brassica oleracea HOM05D000817 ORTHO05D000702 3.6e-06 54.7 67 46.3
Carub.0007s2967 Capsella rubella HOM05D008462 ORTHO05D010511 4.7e-06 54.3 54 46.3
Prupe.8G194700 Prunus persica HOM05D009215 ORTHO05D010851 4.7e-06 54.3 72 40.3


User provided reference genes

Program Settings