Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 7.4e-118 427.2 210 100.0
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 8.0e-88 327.4 192 84.4
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 6.4e-85 317.8 193 82.4
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 6.6e-82 307.8 195 80.0
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 2.5e-81 305.8 192 79.2
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 1.2e-80 303.5 196 79.6
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 1.4e-79 300.1 195 76.9
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 3.7e-77 292.0 199 75.9
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 4.9e-77 291.6 195 76.9
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 6.4e-77 291.2 194 77.3
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 2.4e-76 289.3 194 74.7
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 7.1e-76 287.7 193 75.1
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 2.1e-72 276.2 165 81.8
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 1.2e-67 260.4 211 64.9
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 2.2e-61 239.6 208 58.7
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 2.9e-61 239.2 203 61.6
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 3.8e-61 238.8 203 61.6
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 1.4e-60 236.9 205 59.5
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 1.9e-60 236.5 208 59.6
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.9e-60 236.5 205 60.5
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 3.2e-60 235.7 200 60.0
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 9.3e-60 234.2 205 59.0
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 1.2e-59 233.8 206 60.7
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 4.6e-59 231.9 205 58.0
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.3e-58 230.3 202 57.4
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 2.3e-58 229.6 204 60.3
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 3.0e-58 229.2 200 59.0
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 6.6e-58 228.0 201 59.7
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 1.1e-57 227.3 210 55.7
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.1e-57 227.3 200 59.5
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 2.5e-57 226.1 207 58.5
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 3.3e-57 225.7 204 58.3
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.3e-57 225.7 210 56.2
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 4.3e-57 225.3 200 59.0
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 1.3e-56 223.8 201 57.2
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 3.6e-56 222.2 197 55.8
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.2e-56 221.5 210 54.3
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 6.2e-56 221.5 203 55.2
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 8.1e-56 221.1 204 56.4
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 1.4e-55 220.3 203 57.1
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.4e-55 220.3 206 55.8
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 1.8e-55 219.9 207 56.5
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.4e-55 219.5 212 55.7
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 2.4e-55 219.5 200 55.5
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 5.3e-55 218.4 203 54.7
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 5.3e-55 218.4 203 54.7
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 6.9e-55 218.0 208 55.8
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 1.2e-54 217.2 201 54.7
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.6e-54 216.1 203 54.2
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 5.8e-54 214.9 203 53.7
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 7.6e-54 214.5 209 56.5
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.7e-53 213.4 205 53.7
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 8.4e-53 211.1 205 53.2
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.1e-52 210.7 215 55.3
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.4e-52 210.3 203 53.2
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.4e-52 210.3 200 57.0
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 2.4e-52 209.5 201 56.2
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 2.4e-52 209.5 210 55.7
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 1.2e-51 207.2 208 55.8
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 2.7e-51 206.1 209 55.5
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 2.7e-51 206.1 202 54.0
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 3.5e-51 205.7 204 54.9
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 4.6e-51 205.3 218 52.3
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 6.0e-51 204.9 212 53.8
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 6.0e-51 204.9 212 53.8
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.0e-50 204.1 181 58.6
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 1.0e-50 204.1 200 51.5
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 2.3e-50 203.0 211 55.5
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 3.9e-50 202.2 203 52.7
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 5.1e-50 201.8 208 51.4
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 8.7e-50 201.1 211 54.0
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.5e-49 200.3 202 52.0
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 7.3e-49 198.0 240 47.1
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 9.6e-49 197.6 211 50.7
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.3e-48 197.2 209 53.1
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 1.3e-48 197.2 240 47.1
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.6e-48 196.8 184 56.5
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 8.1e-48 194.5 161 62.7
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.5e-46 190.3 219 48.4
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 1.3e-45 187.2 201 52.2
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 6.4e-45 184.9 208 51.4
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 1.4e-44 183.7 204 48.0
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 1.9e-44 183.3 212 50.9
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 2.7e-43 179.5 205 46.8
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.0e-42 177.6 155 59.4
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 3.0e-42 176.0 176 55.1
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 1.3e-40 170.6 200 49.5
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.1e-39 166.0 170 51.2
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 3.1e-39 166.0 146 62.3
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 2.0e-38 163.3 212 45.3
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 3.4e-38 162.5 181 49.2
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 4.5e-38 162.2 201 47.3
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 7.6e-38 161.4 203 42.4
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 1.3e-37 160.6 200 41.5
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.4e-37 157.9 162 50.6
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 2.5e-36 156.4 127 63.8
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 2.1e-35 153.3 151 51.7
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 9.0e-31 137.9 199 38.2
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.2e-29 133.3 151 51.7
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 3.2e-28 129.4 199 44.2
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 5.5e-28 128.6 169 44.4
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.1e-27 126.7 144 53.5
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 3.1e-23 112.8 131 51.1
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 2.7e-19 99.8 96 54.2
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 5.3e-15 85.5 172 33.1
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 2.0e-14 83.6 57 68.4
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.4e-14 82.8 80 53.8
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 2.2e-13 80.1 123 43.1
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 1.9e-12 77.0 131 35.9
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.7e-11 72.4 51 70.6
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.4e-09 65.1 71 54.9
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 9.7e-09 64.7 71 43.7
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 3.7e-08 62.8 96 40.6
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 3.1e-07 59.7 147 28.6


User provided reference genes

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