Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR098660 Cardamine hirsuta HOM05D001712 ORTHO05D016752 8.9e-26 119.4 56 100.0
A01p17740 Brassica napus HOM05D001712 ORTHO05D001731 3.6e-11 70.9 50 66.0
BraA01t01729Z Brassica rapa HOM05D001712 ORTHO05D001731 3.6e-11 70.9 50 66.0
Thhalv10013812m.g Eutrema salsugineum HOM05D001712 ORTHO05D001731 1.1e-10 69.3 50 62.0
Thhalv10014123m.g Eutrema salsugineum HOM05D001712 ORTHO05D001731 1.1e-10 69.3 56 57.1
Thhalv10026750m.g Eutrema salsugineum HOM05D001712 ORTHO05D001731 2.3e-10 68.2 50 60.0
BcaC09g50714 Brassica carinata HOM05D001712 ORTHO05D001731 3.1e-10 67.8 50 60.0
C01p22410 Brassica napus HOM05D001712 ORTHO05D001731 3.1e-10 67.8 50 60.0
BolC1t02172H Brassica oleracea HOM05D001712 ORTHO05D001731 3.1e-10 67.8 50 60.0
AL8G31660 Arabidopsis lyrata HOM05D001712 ORTHO05D001731 4.0e-10 67.4 50 60.0
A10p31170 Brassica napus HOM05D001712 ORTHO05D001731 4.0e-10 67.4 50 60.0
BraA10t45162Z Brassica rapa HOM05D001712 ORTHO05D001731 4.0e-10 67.4 50 60.0
Sp6g17910 Schrenkiella parvula HOM05D001712 ORTHO05D001731 4.0e-10 67.4 50 60.0
AT5G04950 Arabidopsis thaliana HOM05D001712 ORTHO05D001731 5.2e-10 67.0 50 60.0
BcaC06g32211 Brassica carinata HOM05D001712 ORTHO05D001731 5.2e-10 67.0 50 60.0
C09p71780 Brassica napus HOM05D001712 ORTHO05D001731 5.2e-10 67.0 50 60.0
BolC9t59929H Brassica oleracea HOM05D001712 ORTHO05D001731 5.2e-10 67.0 50 60.0
CARHR208310 Cardamine hirsuta HOM05D001712 ORTHO05D001731 5.2e-10 67.0 56 55.4
BcaB01g05930 Brassica carinata HOM05D001712 ORTHO05D001731 6.8e-10 66.6 50 60.0
BolC3t12786H Brassica oleracea HOM05D001712 ORTHO05D001731 6.8e-10 66.6 50 60.0
AL6G14650 Arabidopsis lyrata HOM05D001712 ORTHO05D001731 8.9e-10 66.2 50 60.0
BcaC06g32207 Brassica carinata HOM05D001712 ORTHO05D001731 1.2e-09 65.9 50 58.0
BraA03t09568Z Brassica rapa HOM05D001712 ORTHO05D001731 1.2e-09 65.9 50 58.0
BcaB08g35972 Brassica carinata HOM05D001712 ORTHO05D001731 1.5e-09 65.5 50 60.0
BcaNung02414 Brassica carinata HOM05D001712 ORTHO05D001731 1.5e-09 65.5 50 58.0
Sp6g37850 Schrenkiella parvula HOM05D001712 ORTHO05D001731 2.0e-09 65.1 50 58.0
BcaC04g20160 Brassica carinata HOM05D001712 ORTHO05D001731 2.6e-09 64.7 58 51.7
BcaNung04442 Brassica carinata HOM05D001712 ORTHO05D001731 2.6e-09 64.7 50 58.0
BcaNung04443 Brassica carinata HOM05D001712 ORTHO05D001731 2.6e-09 64.7 50 58.0
A10p13270 Brassica napus HOM05D001712 ORTHO05D001731 2.6e-09 64.7 58 51.7
C09p47150 Brassica napus HOM05D001712 ORTHO05D001731 2.6e-09 64.7 58 51.7
BolC9t57570H Brassica oleracea HOM05D001712 ORTHO05D001731 2.6e-09 64.7 58 51.7
BraA10t43424Z Brassica rapa HOM05D001712 ORTHO05D001731 2.6e-09 64.7 58 51.7
Carub.0006s0389 Capsella rubella HOM05D001712 ORTHO05D001731 2.6e-09 64.7 50 56.0
AT5G56080 Arabidopsis thaliana HOM05D001712 ORTHO05D001731 3.4e-09 64.3 50 58.0
C03p02350 Brassica napus HOM05D001712 ORTHO05D001731 3.4e-09 64.3 50 58.0
Sp7g24430 Schrenkiella parvula HOM05D001712 ORTHO05D001731 3.4e-09 64.3 50 56.0
A03p02000 Brassica napus HOM05D001712 ORTHO05D001731 4.4e-09 63.9 50 56.0
CARHR269460 Cardamine hirsuta HOM05D001712 ORTHO05D001731 4.4e-09 63.9 50 58.0
BcaB05g22242 Brassica carinata HOM05D001712 ORTHO05D001731 5.8e-09 63.5 50 56.0
A02p09370 Brassica napus HOM05D001712 ORTHO05D001731 5.8e-09 63.5 50 56.0
BraA02t05999Z Brassica rapa HOM05D001712 ORTHO05D001731 5.8e-09 63.5 50 56.0
C02p15520 Brassica napus HOM05D001712 ORTHO05D001731 7.5e-09 63.2 50 56.0
BraA05t19117Z Brassica rapa HOM05D001712 ORTHO05D016752 7.5e-09 63.2 50 60.0
Carub.0008s1640 Capsella rubella HOM05D001712 ORTHO05D001731 7.5e-09 63.2 50 58.0
C03p82380 Brassica napus HOM05D001712 ORTHO05D016752 9.8e-09 62.8 50 56.0
C03p82410 Brassica napus HOM05D001712 ORTHO05D016752 9.8e-09 62.8 50 56.0
BolC3t20512H Brassica oleracea HOM05D001712 ORTHO05D016752 9.8e-09 62.8 50 56.0
BolC3t20514H Brassica oleracea HOM05D001712 ORTHO05D016752 9.8e-09 62.8 50 56.0
BraA02t07018Z Brassica rapa HOM05D001712 ORTHO05D016752 9.8e-09 62.8 50 60.0
A04p08770 Brassica napus HOM05D001712 ORTHO05D016752 1.3e-08 62.4 50 56.0
Thhalv10024166m.g Eutrema salsugineum HOM05D001712 ORTHO05D001731 2.2e-08 61.6 48 56.2
BcaB01g05620 Brassica carinata HOM05D001712 ORTHO05D016752 3.7e-08 60.8 50 56.0
BcaNung05095 Brassica carinata HOM05D001712 ORTHO05D016752 3.7e-08 60.8 50 56.0
BolC2t07667H Brassica oleracea HOM05D001712 ORTHO05D001731 4.9e-08 60.5 50 54.0
THA.LOC104816890 Tarenaya hassleriana HOM05D001712 ORTHO05D001731 4.9e-08 60.5 50 52.0
BcaC05g24780 Brassica carinata HOM05D001712 ORTHO05D001731 6.4e-08 60.1 50 54.0
A01p27460 Brassica napus HOM05D001712 ORTHO05D001731 6.4e-08 60.1 48 54.2
A06p05980 Brassica napus HOM05D001712 ORTHO05D001731 6.4e-08 60.1 50 54.0
C05p07250 Brassica napus HOM05D001712 ORTHO05D001731 6.4e-08 60.1 50 54.0
BolC5t29483H Brassica oleracea HOM05D001712 ORTHO05D001731 6.4e-08 60.1 50 54.0
BraA01t02886Z Brassica rapa HOM05D001712 ORTHO05D001731 6.4e-08 60.1 48 54.2
BraA06t23808Z Brassica rapa HOM05D001712 ORTHO05D001731 6.4e-08 60.1 50 54.0
Sp2g06380 Schrenkiella parvula HOM05D001712 ORTHO05D001731 6.4e-08 60.1 48 54.2
AT1G56430 Arabidopsis thaliana HOM05D001712 ORTHO05D001731 8.3e-08 59.7 48 52.1
C07p29350 Brassica napus HOM05D001712 ORTHO05D001731 8.3e-08 59.7 50 54.0
Carub.0002s0771 Capsella rubella HOM05D001712 ORTHO05D001731 1.1e-07 59.3 48 52.1
Ah.04g158680 Amaranthus hybridus HOM05D001712 ORTHO05D001731 1.4e-07 58.9 44 61.4
AL1G66130 Arabidopsis lyrata HOM05D001712 ORTHO05D001731 1.4e-07 58.9 48 52.1
BcaC09g49558 Brassica carinata HOM05D001712 ORTHO05D001731 1.4e-07 58.9 48 52.1
C01p35310 Brassica napus HOM05D001712 ORTHO05D001731 1.4e-07 58.9 48 52.1
BolC1t03488H Brassica oleracea HOM05D001712 ORTHO05D001731 1.4e-07 58.9 48 52.1
AUR62000396 Chenopodium quinoa HOM05D001712 ORTHO05D001731 1.9e-07 58.5 44 61.4
Aa31LG1G6050 Aethionema arabicum HOM05D001712 ORTHO05D001731 2.4e-07 58.2 50 48.0
Aa31LG1G6060 Aethionema arabicum HOM05D001712 ORTHO05D001731 2.4e-07 58.2 50 50.0
Aa31sc76G70 Aethionema arabicum HOM05D001712 ORTHO05D001731 2.4e-07 58.2 50 48.0
AUR62006752 Chenopodium quinoa HOM05D001712 ORTHO05D001731 2.4e-07 58.2 44 61.4
EL10Ac4g09455 Beta vulgaris HOM05D001712 ORTHO05D001731 5.4e-07 57.0 44 59.1
CARHR055180 Cardamine hirsuta HOM05D001712 ORTHO05D001731 7.0e-07 56.6 48 50.0
Thhalv10008206m.g Eutrema salsugineum HOM05D001712 ORTHO05D001731 7.0e-07 56.6 50 50.0
THA.LOC104820632 Tarenaya hassleriana HOM05D001712 ORTHO05D001731 7.0e-07 56.6 50 48.0
Aa31LG2G11480 Aethionema arabicum HOM05D001712 ORTHO05D001731 9.2e-07 56.2 50 50.0
THA.LOC104811690 Tarenaya hassleriana HOM05D001712 ORTHO05D001731 9.2e-07 56.2 50 52.0
Ah.06g195950 Amaranthus hybridus HOM05D001712 ORTHO05D001731 1.2e-06 55.8 44 56.8
AT1G09240 Arabidopsis thaliana HOM05D001712 ORTHO05D001731 1.2e-06 55.8 50 50.0
Carub.0007s1441 Capsella rubella HOM05D001712 ORTHO05D001731 1.2e-06 55.8 51 52.9
Sp1g07850 Schrenkiella parvula HOM05D001712 ORTHO05D001731 1.2e-06 55.8 50 50.0
AL1G19730 Arabidopsis lyrata HOM05D001712 ORTHO05D001731 2.1e-06 55.1 50 50.0
Cc02_g35040 Coffea canephora HOM05D001712 ORTHO05D001731 3.5e-06 54.3 44 54.5
Lalb_Chr04g0260431 Lupinus albus HOM05D001712 ORTHO05D001731 3.5e-06 54.3 44 54.5
CARHR009200 Cardamine hirsuta HOM05D001712 ORTHO05D001731 4.6e-06 53.9 50 48.0
MD12G1205900 Malus domestica HOM05D001712 ORTHO05D001731 7.8e-06 53.1 44 54.5
Nitab4.5_0000155g0090 Nicotiana tabacum HOM05D001712 ORTHO05D001731 7.8e-06 53.1 44 52.3


User provided reference genes

Program Settings