Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR096030 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.3e-38 162.5 80 100.0
BolC6t36891H Brassica oleracea HOM05D000214 ORTHO05D000131 1.7e-30 135.6 80 78.8
BcaC02g07711 Brassica carinata HOM05D000214 ORTHO05D000131 1.1e-29 132.9 78 79.5
CARHR129000 Cardamine hirsuta HOM05D000214 ORTHO05D013285 4.2e-29 131.0 80 78.8
CARHR064670 Cardamine hirsuta HOM05D000214 ORTHO05D013285 7.2e-29 130.2 74 82.4
CARHR052510 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.6e-28 127.9 80 78.8
CARHR100300 Cardamine hirsuta HOM05D000214 ORTHO05D013285 7.9e-28 126.7 80 76.2
CARHR263110 Cardamine hirsuta HOM05D000214 ORTHO05D013285 2.5e-26 121.7 80 73.8
BcaB03g11600 Brassica carinata HOM05D000214 ORTHO05D000131 5.7e-26 120.6 80 67.5
CARHR032440 Cardamine hirsuta HOM05D000214 ORTHO05D000131 5.7e-26 120.6 69 84.1
BolC6t36374H Brassica oleracea HOM05D000214 ORTHO05D027157 2.6e-23 111.7 80 68.8
BolC6t36376H Brassica oleracea HOM05D042146 ORTHO05D027157 2.6e-23 111.7 80 68.8
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 3.4e-23 111.3 79 64.6
CARHR271650 Cardamine hirsuta HOM05D000214 ORTHO05D000131 5.0e-22 107.5 77 64.9
BolC9t58094H Brassica oleracea HOM05D000214 ORTHO05D000131 8.5e-22 106.7 80 63.8
CARHR051840 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.1e-21 106.3 77 62.3
CARHR058310 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.4e-21 105.9 77 62.3
CARHR221620 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.4e-21 105.9 68 73.5
BolC2t07383H Brassica oleracea HOM05D000026 ORTHO05D027236 1.9e-21 105.5 79 63.3
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 1.2e-20 102.8 73 63.0
BolC6t37666H Brassica oleracea HOM05D000214 ORTHO05D000131 4.7e-20 100.9 77 59.7
Sp5g15613 Schrenkiella parvula HOM05D000214 ORTHO05D000131 1.0e-19 99.8 72 62.5
BolC1t02777H Brassica oleracea HOM05D000214 ORTHO05D000131 1.8e-19 99.0 67 70.1
CARHR150730 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.3e-19 98.6 68 67.6
BcaB05g21784 Brassica carinata HOM05D000214 ORTHO05D000131 6.7e-19 97.1 78 57.7
BcaB04g19150 Brassica carinata HOM05D000214 ORTHO05D000131 4.4e-18 94.4 87 55.2
CARHR057030 Cardamine hirsuta HOM05D000214 ORTHO05D000131 7.4e-18 93.6 58 79.3
C09p19340 Brassica napus HOM05D000214 ORTHO05D028072 1.4e-16 89.4 75 52.0
CARHR216040 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.4e-16 89.4 50 86.0
BolC3t15909H Brassica oleracea HOM05D000214 ORTHO05D000131 7.0e-16 87.0 51 82.4
CARHR099640 Cardamine hirsuta HOM05D000214 ORTHO05D000131 7.0e-16 87.0 48 87.5
CARHR060220 Cardamine hirsuta HOM05D000214 ORTHO05D000131 9.1e-16 86.7 68 63.2
BolC4t28446H Brassica oleracea HOM05D036964 ORTHO05D033459 5.9e-15 84.0 51 78.4
CARHR156020 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.9e-13 79.0 59 61.0
BolC6t37380H Brassica oleracea HOM05D000214 ORTHO05D000131 5.5e-13 77.4 61 60.7
BolC7t43042H Brassica oleracea HOM05D000214 ORTHO05D000131 7.2e-13 77.0 70 52.9
BolC4t24671H Brassica oleracea HOM05D000405 ORTHO05D000974 1.2e-12 76.3 63 55.6
BolC2t09138H Brassica oleracea HOM05D000214 ORTHO05D000131 4.0e-11 71.2 54 59.3
Sp5g15125 Schrenkiella parvula HOM05D000214 ORTHO05D000131 2.6e-10 68.6 47 66.0
CARHR054390 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.8e-09 65.1 41 73.2
BolC8t50968H Brassica oleracea HOM05D000214 ORTHO05D000131 4.8e-09 64.3 77 44.2
BolC3t12646H Brassica oleracea HOM05D000214 ORTHO05D041722 8.2e-09 63.5 75 44.0
BolC3t17509H Brassica oleracea HOM05D001696 ORTHO05D040189 8.2e-09 63.5 45 66.7
BolC6t36645H Brassica oleracea HOM05D000214 ORTHO05D000131 1.1e-08 63.2 73 45.2
BcaB08g35779 Brassica carinata HOM05D000214 ORTHO05D000131 1.8e-08 62.4 61 50.8
BolC3t15958H Brassica oleracea HOM05D000214 ORTHO05D000131 1.8e-08 62.4 73 43.8
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 4.1e-08 61.2 41 63.4
BcaNung03654 Brassica carinata HOM05D000214 ORTHO05D000131 5.3e-08 60.8 79 43.0
A02p33070 Brassica napus HOM05D000214 ORTHO05D000131 1.6e-07 59.3 73 41.1
BcaB08g35561 Brassica carinata HOM05D000214 ORTHO05D000131 2.0e-07 58.9 76 39.5
Ah.05g175350 Amaranthus hybridus HOM05D000214 ORTHO05D000131 7.7e-07 57.0 80 43.8
CARHR262640 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.3e-06 56.2 77 39.0
BcaC05g28208 Brassica carinata HOM05D000214 ORTHO05D000131 8.5e-06 53.5 76 39.5


User provided reference genes

Program Settings