Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR090630 Cardamine hirsuta HOM05D000206 ORTHO05D033184 6.4e-31 136.7 67 100.0
Sp3g13820 Schrenkiella parvula HOM05D000206 ORTHO05D000232 1.0e-20 102.8 60 83.3
Thhalv10021145m.g Eutrema salsugineum HOM05D000206 ORTHO05D000232 3.9e-20 100.9 60 81.7
BcaC09g48524 Brassica carinata HOM05D000206 ORTHO05D000232 1.1e-19 99.4 54 83.3
A01p38510 Brassica napus HOM05D000206 ORTHO05D000232 1.1e-19 99.4 54 83.3
C01p48860 Brassica napus HOM05D000206 ORTHO05D000232 1.1e-19 99.4 54 83.3
C01p48880 Brassica napus HOM05D000206 ORTHO05D000232 1.1e-19 99.4 54 83.3
BolC1t04843H Brassica oleracea HOM05D000206 ORTHO05D000232 1.1e-19 99.4 54 83.3
BolC1t04851H Brassica oleracea HOM05D000206 ORTHO05D000232 1.1e-19 99.4 54 83.3
BraA01t03901Z Brassica rapa HOM05D000206 ORTHO05D000232 4.3e-19 97.4 54 81.5
Thhalv10021144m.g Eutrema salsugineum HOM05D000206 ORTHO05D000232 9.6e-19 96.3 54 77.8
BcaC05g28959 Brassica carinata HOM05D000206 ORTHO05D000232 1.3e-18 95.9 54 79.6
A05p33850 Brassica napus HOM05D000206 ORTHO05D000232 1.3e-18 95.9 54 79.6
C05p51530 Brassica napus HOM05D000206 ORTHO05D000232 1.3e-18 95.9 54 79.6
BolC5t33838H Brassica oleracea HOM05D000206 ORTHO05D000232 1.3e-18 95.9 54 79.6
BraA05t22207Z Brassica rapa HOM05D000206 ORTHO05D000232 1.3e-18 95.9 54 79.6
BcaB04g20916 Brassica carinata HOM05D000206 ORTHO05D000232 2.8e-18 94.7 54 79.6
BraA01t03975Z Brassica rapa HOM05D000206 ORTHO05D000232 2.8e-18 94.7 54 79.6
Sp3g13830 Schrenkiella parvula HOM05D000206 ORTHO05D000232 3.6e-18 94.4 54 79.6
A01p39320 Brassica napus HOM05D000206 ORTHO05D000232 1.1e-17 92.8 54 77.8
BcaB06g29592 Brassica carinata HOM05D000206 ORTHO05D000232 4.0e-17 90.9 54 72.2
BcaB06g29593 Brassica carinata HOM05D000206 ORTHO05D000232 4.0e-17 90.9 54 72.2
BcaC09g48406 Brassica carinata HOM05D000206 ORTHO05D000232 4.0e-17 90.9 54 75.9
A05p33840 Brassica napus HOM05D000206 ORTHO05D000232 4.0e-17 90.9 54 74.1
C05p51480 Brassica napus HOM05D000206 ORTHO05D000232 4.0e-17 90.9 54 74.1
BolC5t33835H Brassica oleracea HOM05D000206 ORTHO05D000232 4.0e-17 90.9 54 74.1
BraA05t22206Z Brassica rapa HOM05D000206 ORTHO05D000232 4.0e-17 90.9 54 74.1
AT1G28030 Arabidopsis thaliana HOM05D000206 ORTHO05D000232 6.9e-17 90.1 52 76.9
C01p48830 Brassica napus HOM05D000206 ORTHO05D000232 6.9e-17 90.1 52 76.9
C01p50120 Brassica napus HOM05D000206 ORTHO05D033184 6.9e-17 90.1 53 77.4
BolC1t04838H Brassica oleracea HOM05D000206 ORTHO05D000232 6.9e-17 90.1 52 76.9
Aa31LG8G2790 Aethionema arabicum HOM05D000206 ORTHO05D000232 9.0e-17 89.7 54 70.4
A01p38500 Brassica napus HOM05D000206 ORTHO05D000232 9.0e-17 89.7 52 76.9
BolC1t04848H Brassica oleracea HOM05D000206 ORTHO05D000232 9.0e-17 89.7 52 76.9
BolC1t04850H Brassica oleracea HOM05D000206 ORTHO05D000232 9.0e-17 89.7 52 76.9
BolC1t04966H Brassica oleracea HOM05D000206 ORTHO05D033184 9.0e-17 89.7 54 74.1
BraA01t03900Z Brassica rapa HOM05D000206 ORTHO05D000232 9.0e-17 89.7 52 76.9
BcaC05g28955 Brassica carinata HOM05D000206 ORTHO05D000232 2.6e-16 88.2 51 76.5
Carub.0001s4192 Capsella rubella HOM05D000206 ORTHO05D000232 1.7e-15 85.5 60 66.7
Carub.0001s2648 Capsella rubella HOM05D000206 ORTHO05D000232 1.9e-14 82.0 52 71.2
Carub.0001s4190 Capsella rubella HOM05D000206 ORTHO05D000232 5.5e-14 80.5 54 61.1
Thhalv10011658m.g Eutrema salsugineum HOM05D000206 ORTHO05D000232 7.1e-14 80.1 60 60.0
BcaB07g33391 Brassica carinata HOM05D000206 ORTHO05D000232 9.3e-14 79.7 60 58.3
BcaC08g43462 Brassica carinata HOM05D000206 ORTHO05D000232 1.6e-13 79.0 60 58.3
C06p08370 Brassica napus HOM05D000206 ORTHO05D000232 1.6e-13 79.0 60 58.3
BraA06t23375Z Brassica rapa HOM05D000206 ORTHO05D000232 2.1e-13 78.6 60 58.3
A06p01560 Brassica napus HOM05D000206 ORTHO05D000232 4.6e-13 77.4 60 58.3
CARHR043010 Cardamine hirsuta HOM05D000206 ORTHO05D000232 4.6e-13 77.4 54 57.4
Sp1g39390 Schrenkiella parvula HOM05D000206 ORTHO05D000232 4.6e-13 77.4 60 56.7
CARHR043000 Cardamine hirsuta HOM05D000206 ORTHO05D000232 1.0e-12 76.3 60 58.3
A08p01920 Brassica napus HOM05D000206 ORTHO05D000232 1.3e-12 75.9 60 55.0
C03p90900 Brassica napus HOM05D000206 ORTHO05D000232 1.3e-12 75.9 60 55.0
Carub.0001s4191 Capsella rubella HOM05D000206 ORTHO05D000232 5.1e-12 73.9 60 55.0
BolC6t35919H Brassica oleracea HOM05D000206 ORTHO05D000232 3.3e-11 71.2 51 58.8
AT1G52810 Arabidopsis thaliana HOM05D000206 ORTHO05D000232 5.6e-11 70.5 63 50.8
BcaB07g33389 Brassica carinata HOM05D000206 ORTHO05D000232 3.7e-10 67.8 59 52.5
BraA08t32244Z Brassica rapa HOM05D000206 ORTHO05D000232 3.1e-09 64.7 60 51.7
Glyma.19G133300 Glycine max HOM05D000206 ORTHO05D000232 3.8e-07 57.8 48 54.2
VMungo1383G1443 Vigna mungo HOM05D000206 ORTHO05D000232 1.1e-06 56.2 49 53.1
CARHR251480 Cardamine hirsuta HOM05D000206 ORTHO05D000232 1.4e-06 55.8 58 58.6
Haze_16470 Corylus avellana HOM05D000206 ORTHO05D000232 1.4e-06 55.8 61 54.1
Manes.06G015600 Manihot esculenta HOM05D000206 ORTHO05D000232 1.9e-06 55.5 51 52.9
CARHR251460 Cardamine hirsuta HOM05D000206 ORTHO05D000232 3.2e-06 54.7 60 56.7
Phvul.001G127400 Phaseolus vulgaris HOM05D000206 ORTHO05D000232 3.2e-06 54.7 49 51.0
Aa31LG5G2590 Aethionema arabicum HOM05D000206 ORTHO05D000232 4.2e-06 54.3 57 52.6
arahy.Tifrunner.gnm1.ann1.2AJ2PQ Arachis hypogaea HOM05D000206 ORTHO05D000232 4.2e-06 54.3 58 50.0
arahy.Tifrunner.gnm1.ann1.J79AGK Arachis hypogaea HOM05D000206 ORTHO05D000232 4.2e-06 54.3 58 50.0
CARHR251490 Cardamine hirsuta HOM05D000206 ORTHO05D000232 4.2e-06 54.3 58 56.9
Eucgr.J03021 Eucalyptus grandis HOM05D000206 ORTHO05D000232 4.2e-06 54.3 61 50.8
TWI18G0502 Tripterygium wilfordii HOM05D000206 ORTHO05D000232 4.2e-06 54.3 61 50.8
BcaB01g02502 Brassica carinata HOM05D000206 ORTHO05D000232 9.3e-06 53.1 58 51.7
Prupe.3G075900 Prunus persica HOM05D000206 ORTHO05D000232 9.3e-06 53.1 58 51.7


User provided reference genes

Program Settings