Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 4.1e-134 481.5 257 100.0
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 2.8e-98 362.5 229 83.8
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 4.4e-96 355.1 229 83.4
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 2.9e-95 352.4 229 83.0
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 8.3e-95 350.9 229 81.2
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.6e-93 346.7 229 80.8
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 1.6e-93 346.7 229 80.8
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 3.5e-93 345.5 229 79.5
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 4.6e-93 345.1 229 81.2
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 3.0e-92 342.4 229 80.3
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 2.1e-90 336.3 246 76.0
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 2.6e-80 302.8 231 71.4
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 4.1e-78 295.4 229 68.1
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 4.2e-62 242.3 229 56.3
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 4.2e-62 242.3 229 56.3
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 1.6e-61 240.4 229 55.5
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 7.8e-61 238.0 234 53.0
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 9.6e-59 231.1 229 55.5
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 3.6e-58 229.2 229 50.7
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 5.3e-57 225.3 231 51.9
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.3e-57 225.3 229 50.7
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 2.6e-56 223.0 229 53.3
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 3.4e-56 222.6 227 52.4
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 3.4e-56 222.6 227 52.4
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 3.4e-56 222.6 229 52.8
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 5.8e-56 221.9 231 54.5
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 9.9e-56 221.1 244 50.0
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 2.2e-55 219.9 231 51.5
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 2.9e-55 219.5 229 52.4
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 2.9e-55 219.5 229 53.3
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 3.8e-55 219.2 230 49.1
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 6.4e-55 218.4 229 50.2
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 6.4e-55 218.4 238 50.8
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 4.2e-54 215.7 229 49.8
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 4.2e-54 215.7 229 49.3
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 5.4e-54 215.3 229 51.1
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 5.4e-54 215.3 229 51.1
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 5.4e-54 215.3 231 53.2
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 7.1e-54 214.9 238 50.4
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 9.3e-54 214.5 229 52.4
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.6e-53 213.8 229 49.3
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.6e-53 213.8 229 50.7
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.6e-53 213.8 229 51.1
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 6.0e-53 211.8 229 50.7
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 6.0e-53 211.8 229 50.7
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 7.9e-53 211.5 229 49.8
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 7.9e-53 211.5 229 52.4
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 1.8e-52 210.3 229 52.4
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 2.3e-52 209.9 229 50.2
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 3.0e-52 209.5 242 47.5
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 3.9e-52 209.1 231 50.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 3.9e-52 209.1 227 50.7
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 3.9e-52 209.1 227 50.7
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 6.7e-52 208.4 228 49.1
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 6.7e-52 208.4 229 48.5
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 8.7e-52 208.0 229 51.5
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.5e-51 207.2 229 50.2
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 4.3e-51 205.7 229 48.9
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 5.6e-51 205.3 229 48.9
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 5.6e-51 205.3 229 52.8
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 9.6e-51 204.5 229 48.0
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 1.6e-50 203.8 229 48.5
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 2.1e-50 203.4 229 48.9
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 4.8e-50 202.2 229 51.5
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 6.2e-50 201.8 229 49.3
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 6.2e-50 201.8 231 49.8
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 8.1e-50 201.4 228 46.1
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 1.1e-49 201.1 231 48.5
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.4e-49 200.7 264 45.1
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.8e-49 200.3 229 47.6
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 1.8e-49 200.3 205 53.7
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 2.4e-49 199.9 229 47.6
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 2.4e-49 199.9 228 48.7
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 5.3e-49 198.7 229 48.9
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 5.3e-49 198.7 229 49.3
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 6.9e-49 198.4 229 48.9
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 3.4e-48 196.1 227 48.0
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 5.8e-48 195.3 229 48.5
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 1.3e-47 194.1 205 51.2
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.3e-47 194.1 229 48.5
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.1e-46 191.0 227 47.6
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 2.4e-46 189.9 229 48.5
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 1.2e-45 187.6 231 46.3
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 7.9e-45 184.9 229 44.5
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.1e-44 182.2 243 47.7
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 8.7e-44 181.4 194 51.5
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.1e-43 181.0 216 46.8
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.1e-42 176.8 234 44.4
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 4.8e-42 175.6 185 51.9
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 6.2e-42 175.3 202 48.5
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 8.2e-42 174.9 265 43.0
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 2.4e-41 173.3 231 48.1
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.1e-41 172.9 202 48.0
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 5.3e-41 172.2 229 44.1
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 9.0e-41 171.4 255 43.5
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 1.7e-39 167.2 214 41.1
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 1.4e-38 164.1 226 41.2
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.4e-33 147.5 212 44.8
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 1.1e-30 137.9 148 55.4
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.3e-28 131.0 225 41.8
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 4.3e-27 125.9 234 33.3
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.4e-25 120.2 142 50.7
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 8.8e-20 101.7 137 42.3
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.6e-19 100.1 220 31.8
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 2.9e-15 86.7 191 31.9
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.1e-14 84.7 95 46.3
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.1e-14 84.7 95 46.3
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.7e-13 80.1 94 41.5
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 2.3e-12 77.0 190 30.5
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 2.0e-11 73.9 155 34.8
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 1.2e-08 64.7 81 43.2
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 5.0e-07 59.3 64 51.6


User provided reference genes

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