Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR088170 Cardamine hirsuta HOM05D004137 ORTHO05D004804 4.7e-31 137.5 84 100.0
AL3G25410 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 2.5e-16 88.6 64 67.2
AT3G13500 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 4.7e-15 84.3 64 64.1
A05p35990 Brassica napus HOM05D004137 ORTHO05D004804 1.8e-14 82.4 63 65.1
BraA05t22405Z Brassica rapa HOM05D004137 ORTHO05D004804 1.8e-14 82.4 63 65.1
Thhalv10022151m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 1.8e-14 82.4 56 69.6
THA.LOC104810322 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 5.8e-13 77.4 66 60.6
Carub.0003s1297 Capsella rubella HOM05D004137 ORTHO05D004804 7.6e-13 77.0 64 60.9
BcaC08g43620 Brassica carinata HOM05D004137 ORTHO05D004804 7.1e-11 70.5 66 53.0
A06p00220 Brassica napus HOM05D004137 ORTHO05D004804 7.1e-11 70.5 66 53.0
C06p10340 Brassica napus HOM05D004137 ORTHO05D004804 7.1e-11 70.5 66 53.0
BolC6t36110H Brassica oleracea HOM05D004137 ORTHO05D004804 7.1e-11 70.5 66 53.0
BraA06t23238Z Brassica rapa HOM05D004137 ORTHO05D004804 7.1e-11 70.5 66 53.0
Thhalv10011858m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 7.1e-11 70.5 66 53.0
AL1G63420 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 1.6e-10 69.3 66 53.0
BcaC08g44196 Brassica carinata HOM05D004137 ORTHO05D004804 2.1e-10 68.9 66 51.5
BolC6t36802H Brassica oleracea HOM05D004137 ORTHO05D004804 2.1e-10 68.9 66 51.5
A05p17500 Brassica napus HOM05D004137 ORTHO05D004804 4.6e-10 67.8 66 50.0
Carub.0001s4388 Capsella rubella HOM05D004137 ORTHO05D004804 4.6e-10 67.8 66 50.0
BolC3t21580H Brassica oleracea HOM05D004137 ORTHO05D004804 1.0e-09 66.6 66 51.5
BcaB02g10824 Brassica carinata HOM05D004137 ORTHO05D004804 1.3e-09 66.2 63 50.8
Sp3g11710 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.3e-09 66.2 53 64.2
BcaC01g01518 Brassica carinata HOM05D004137 ORTHO05D004804 1.7e-09 65.9 66 51.5
AT1G55365 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 2.3e-09 65.5 66 50.0
C03p92680 Brassica napus HOM05D004137 ORTHO05D004804 8.7e-09 63.5 66 50.0
BcaB04g16959 Brassica carinata HOM05D004137 ORTHO05D004804 1.9e-08 62.4 66 51.5
CARHR045030 Cardamine hirsuta HOM05D004137 ORTHO05D004804 2.5e-08 62.0 66 47.0
Sp1g41045 Schrenkiella parvula HOM05D004137 ORTHO05D004804 3.3e-08 61.6 62 50.0
A08p00680 Brassica napus HOM05D004137 ORTHO05D004804 4.7e-07 57.8 66 45.5
BraA08t32126Z Brassica rapa HOM05D004137 ORTHO05D004804 4.7e-07 57.8 66 45.5
AL7G26620 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 8.1e-07 57.0 62 43.5
Manes.03G087303 Manihot esculenta HOM05D004137 ORTHO05D004804 8.1e-07 57.0 66 43.9
BcaC06g32758 Brassica carinata HOM05D004137 ORTHO05D004804 1.4e-06 56.2 62 43.5
Carub.0007s1461 Capsella rubella HOM05D004137 ORTHO05D004804 1.8e-06 55.8 62 41.9
CiPaw.13G177400 Carya illinoinensis HOM05D004137 ORTHO05D004804 1.8e-06 55.8 66 50.0
Atru.chr3.2107 Acer truncatum HOM05D004137 ORTHO05D004804 2.4e-06 55.5 66 45.5
Cpa.g.c44905 Carica papaya HOM05D004137 ORTHO05D004804 3.1e-06 55.1 62 43.5
Aa31LG8G700 Aethionema arabicum HOM05D004137 ORTHO05D004804 4.0e-06 54.7 51 52.9
CARHR233900 Cardamine hirsuta HOM05D004137 ORTHO05D004804 4.0e-06 54.7 62 40.3
C07p54810 Brassica napus HOM05D004137 ORTHO05D004804 6.9e-06 53.9 65 40.0
BolC7t45970H Brassica oleracea HOM05D004137 ORTHO05D004804 6.9e-06 53.9 65 40.0
TWI60G1175 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 6.9e-06 53.9 65 40.0


User provided reference genes

Program Settings