Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 6.5e-185 650.6 331 100.0
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 1.6e-138 496.5 337 78.6
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 1.7e-137 493.0 388 69.3
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 3.8e-132 475.3 384 68.2
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 5.4e-131 471.5 390 68.2
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 1.6e-130 469.9 361 70.6
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 3.1e-126 455.7 333 75.1
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 2.6e-117 426.0 388 64.4
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 5.1e-113 411.8 378 63.0
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 1.1e-112 410.6 390 61.5
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 3.3e-112 409.1 390 61.5
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.3e-111 407.1 372 63.4
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 8.1e-111 404.4 386 61.7
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 5.3e-86 322.0 355 52.7
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 1.6e-66 257.3 327 45.9
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 1.8e-65 253.8 326 43.3
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 5.2e-65 252.3 324 46.0
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 9.8e-64 248.1 325 46.8
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 2.4e-62 243.4 333 45.3
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 3.1e-62 243.0 335 43.0
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 3.1e-62 243.0 320 43.4
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 1.2e-61 241.1 332 44.0
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 1.7e-60 237.3 343 44.3
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 2.2e-60 236.9 323 43.7
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 2.9e-60 236.5 328 43.0
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 5.0e-60 235.7 325 43.4
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 8.5e-60 235.0 332 42.8
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.9e-59 233.8 349 42.7
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 4.2e-59 232.6 323 44.0
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 5.5e-59 232.3 349 42.7
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.5e-59 232.3 331 42.9
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 9.5e-59 231.5 331 42.6
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.6e-58 230.7 336 42.0
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.6e-58 230.7 328 41.5
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.7e-58 229.9 323 43.7
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 8.8e-57 224.9 336 42.0
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 1.5e-56 224.2 388 37.4
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 5.7e-56 222.2 325 41.5
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 5.7e-56 222.2 376 37.2
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 5.7e-56 222.2 336 41.7
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 1.3e-55 221.1 336 42.6
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.7e-55 220.7 343 40.8
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 4.9e-55 219.2 317 43.2
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 4.9e-55 219.2 322 43.2
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 1.1e-54 218.0 372 39.8
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.4e-54 217.6 306 42.8
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 3.1e-54 216.5 333 39.3
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 3.1e-54 216.5 377 37.4
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 4.1e-54 216.1 335 41.2
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 7.0e-54 215.3 354 39.5
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 9.2e-54 214.9 325 40.3
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 5.9e-53 212.2 336 42.3
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 1.3e-52 211.1 177 59.3
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 8.6e-52 208.4 169 61.5
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 8.6e-52 208.4 342 41.2
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 3.3e-51 206.5 357 38.7
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.6e-51 205.7 174 59.8
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 9.5e-51 204.9 310 41.6
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 1.6e-50 204.1 300 39.7
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 2.1e-50 203.8 340 40.6
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 2.8e-50 203.4 298 40.9
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 5.2e-49 199.1 341 38.4
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 5.2e-49 199.1 338 39.9
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 1.5e-48 197.6 235 48.5
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 1.5e-48 197.6 187 54.5
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 2.0e-48 197.2 364 36.5
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 2.6e-48 196.8 311 42.1
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 3.4e-48 196.4 327 37.0
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 1.3e-47 194.5 327 37.6
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 1.3e-47 194.5 177 55.9
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 1.7e-47 194.1 173 54.9
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.9e-47 193.4 166 57.2
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.7e-47 193.0 374 37.4
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 4.9e-47 192.6 370 36.5
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 6.4e-47 192.2 327 37.0
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 1.4e-46 191.0 333 36.3
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 1.4e-46 191.0 333 36.0
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 2.4e-46 190.3 331 38.7
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 1.6e-45 187.6 236 44.5
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 5.9e-45 185.7 360 32.8
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 5.9e-45 185.7 332 36.4
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 1.3e-44 184.5 326 37.1
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 2.3e-44 183.7 328 37.5
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 3.9e-44 183.0 296 40.2
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 5.6e-43 179.1 265 39.6
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.2e-42 177.9 179 51.4
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 2.8e-42 176.8 310 38.1
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 3.6e-42 176.4 167 53.3
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 4.7e-42 176.0 121 69.4
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 8.0e-42 175.3 161 55.9
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 4.0e-41 172.9 173 49.1
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 6.8e-41 172.2 174 48.9
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 1.2e-40 171.4 361 33.0
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 6.4e-39 165.6 169 46.7
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 2.7e-37 160.2 367 31.1
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 7.8e-37 158.7 207 46.9
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 5.0e-36 156.0 244 36.5
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 4.9e-31 139.4 178 45.5
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 7.1e-30 135.6 186 39.2
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 1.3e-28 131.3 137 50.4
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.1e-27 128.3 244 36.1
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 7.3e-27 125.6 125 48.8
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 1.2e-26 124.8 252 37.3
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 2.9e-23 113.6 233 33.5
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 2.7e-21 107.1 168 32.1
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 1.2e-16 91.7 90 45.6
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 7.8e-13 79.0 213 26.3
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 1.7e-12 77.8 69 44.9
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 3.4e-08 63.5 206 31.6


User provided reference genes

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