Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR082950 Cardamine hirsuta HOM05D004172 ORTHO05D006010 0.0e+00 1146.3 596 100.0
Carub.0003s0778 Capsella rubella HOM05D004172 ORTHO05D006010 0.0e+00 1107.8 596 96.5
Sp3g07090 Schrenkiella parvula HOM05D004172 ORTHO05D006010 0.0e+00 1101.3 596 95.1
AL3G19650 Arabidopsis lyrata HOM05D004172 ORTHO05D006010 0.0e+00 1098.6 596 95.3
AT3G08650 Arabidopsis thaliana HOM05D004172 ORTHO05D006010 0.0e+00 1094.7 596 95.1
Thhalv10020349m.g Eutrema salsugineum HOM05D004172 ORTHO05D006010 0.0e+00 1093.2 596 94.6
BolC3t16675H Brassica oleracea HOM05D004172 ORTHO05D006010 0.0e+00 1081.6 595 93.9
BraA03t12811Z Brassica rapa HOM05D004172 ORTHO05D006010 0.0e+00 1081.2 596 93.6
A03p36430 Brassica napus HOM05D004172 ORTHO05D006010 1.2e-311 1072.4 596 93.3
BcaC09g47981 Brassica carinata HOM05D004172 ORTHO05D006010 7.6e-309 1063.1 597 92.0
BolC1t05497H Brassica oleracea HOM05D004172 ORTHO05D006010 1.9e-307 1058.5 598 91.8
BcaB04g21247 Brassica carinata HOM05D004172 ORTHO05D006010 4.2e-307 1057.4 598 92.0
BolC5t34577H Brassica oleracea HOM05D004172 ORTHO05D006010 2.7e-306 1054.7 597 92.1
BcaC01g04188 Brassica carinata HOM05D004172 ORTHO05D006010 1.1e-304 1049.3 595 91.9
C05p59200 Brassica napus HOM05D004172 ORTHO05D006010 1.5e-304 1048.9 597 92.0
BNapus_Darmor_BZH_scaffold_167p00070 Brassica napus HOM05D004172 ORTHO05D006010 1.9e-304 1048.5 598 91.1
A05p40120 Brassica napus HOM05D004172 ORTHO05D006010 9.6e-304 1046.2 597 91.6
Aa31LG5G18700 Aethionema arabicum HOM05D004172 ORTHO05D006010 2.1e-298 1028.5 597 89.1
BcaC05g29600 Brassica carinata HOM05D004172 ORTHO05D006010 7.9e-298 1026.5 597 90.6
THA.LOC104823330 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 5.7e-280 967.2 596 83.4
Manes.09G122000 Manihot esculenta HOM05D004172 ORTHO05D006010 4.7e-258 894.4 599 77.5
Thecc.04G148100 Theobroma cacao HOM05D004172 ORTHO05D006010 2.3e-257 892.1 594 78.5
RcHm_v2.0_Chr3g0459921 Rosa chinensis HOM05D004172 ORTHO05D006010 5.2e-257 891.0 599 77.8
Psat3g117200 Pisum sativum HOM05D004172 ORTHO05D006010 6.7e-257 890.6 592 77.0
Prupe.6G297500 Prunus persica HOM05D004172 ORTHO05D006010 2.6e-256 888.6 591 78.7
MD12G1192900 Malus domestica HOM05D004172 ORTHO05D006010 4.4e-256 887.9 594 77.8
TWI53G0780 Tripterygium wilfordii HOM05D004172 ORTHO05D006010 4.4e-256 887.9 596 77.7
Medtr7g074060 Medicago truncatula HOM05D004172 ORTHO05D006010 7.5e-256 887.1 589 77.1
Eucgr.K01297 Eucalyptus grandis HOM05D004172 ORTHO05D006010 4.8e-255 884.4 591 77.8
CANSAT55G0003 Cannabis sativa HOM05D004172 ORTHO05D006010 1.1e-254 883.2 596 77.3
THA.LOC104806653 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 1.1e-254 883.2 589 76.9
FAN14G3054 Fragaria x ananassa HOM05D004172 ORTHO05D006010 2.4e-254 882.1 599 77.5
Phvul.008G079500 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 2.4e-254 882.1 595 76.0
Glyma.18G217100 Glycine max HOM05D004172 ORTHO05D006010 3.1e-254 881.7 595 76.1
Dinv16944 Davidia involucrata HOM05D004172 ORTHO05D006010 5.3e-254 880.9 595 76.3
Duzib151G0210 Durio zibethinus HOM05D004172 ORTHO05D006010 9.1e-254 880.2 590 77.1
FvH4_6g09450 Fragaria vesca HOM05D004172 ORTHO05D006010 1.2e-253 879.8 599 77.3
Ciclev10011331m.g Citrus clementina HOM05D004172 ORTHO05D006010 1.6e-253 879.4 589 77.9
FAN09G2297 Fragaria x ananassa HOM05D004172 ORTHO05D006010 1.6e-253 879.4 591 78.2
MD04G1177600 Malus domestica HOM05D004172 ORTHO05D006010 1.6e-253 879.4 599 77.0
FAN02G3863 Fragaria x ananassa HOM05D004172 ORTHO05D006010 2.0e-253 879.0 599 77.0
Manes.08G168300 Manihot esculenta HOM05D004172 ORTHO05D006010 2.0e-253 879.0 591 76.0
Lj1g0013582 Lotus japonicus HOM05D004172 ORTHO05D006010 2.7e-253 878.6 587 76.5
Glyma.09G271900 Glycine max HOM05D004172 ORTHO05D006010 7.7e-253 877.1 595 76.0
Gohir.A10G152400 Gossypium hirsutum HOM05D004172 ORTHO05D006010 2.2e-252 875.5 594 76.4
VMungo1383G2431 Vigna mungo HOM05D004172 ORTHO05D006010 2.9e-252 875.2 593 75.2
Ca_07790_v3 Cicer arietinum L. HOM05D004172 ORTHO05D006010 3.8e-252 874.8 593 75.5
Gorai.011G125600 Gossypium raimondii HOM05D004172 ORTHO05D006010 1.5e-251 872.8 591 76.8
arahy.Tifrunner.gnm1.ann1.VH0VRX Arachis hypogaea HOM05D004172 ORTHO05D006010 3.2e-251 871.7 590 75.9
Gohir.A02G001800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 3.2e-251 871.7 594 76.9
Gohir.D10G113800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 4.2e-251 871.3 591 76.3
Lalb_Chr07g0195761 Lupinus albus HOM05D004172 ORTHO05D006010 1.2e-250 869.8 591 75.6
arahy.Tifrunner.gnm1.ann1.SQ7DBT Arachis hypogaea HOM05D004172 ORTHO05D006010 3.6e-250 868.2 589 76.1
arahy.Tifrunner.gnm1.ann1.5JF3JJ Arachis hypogaea HOM05D004172 ORTHO05D006010 4.7e-250 867.8 594 75.4
PGR004G2490 Punica granatum HOM05D004172 ORTHO05D006010 4.7e-250 867.8 596 75.8
arahy.Tifrunner.gnm1.ann1.3N9KBA Arachis hypogaea HOM05D004172 ORTHO05D006010 6.1e-250 867.5 590 75.9
Cfa017003 Carpinus fangiana HOM05D004172 ORTHO05D006010 8.0e-250 867.1 596 75.7
QL07p031617 Quercus lobata HOM05D004172 ORTHO05D006010 8.0e-250 867.1 591 76.8
CsaV3_4G027360 Cucumis sativus L. HOM05D004172 ORTHO05D006010 1.4e-249 866.3 594 75.9
QL07p031284 Quercus lobata HOM05D004172 ORTHO05D006010 3.0e-249 865.1 591 76.8
Sed0001307 Sechium edule HOM05D004172 ORTHO05D006010 3.0e-249 865.1 591 75.6
ClCG04G006210 Citrullus lanatus HOM05D004172 ORTHO05D006010 5.2e-249 864.4 599 75.3
Potri.006G111200 Populus trichocarpa HOM05D004172 ORTHO05D006010 5.2e-249 864.4 592 76.0
Atru.chr8.66 Acer truncatum HOM05D004172 ORTHO05D006010 8.8e-249 863.6 600 75.8
Hma1.2p1_0106F.1_g051180 Hydrangea macrophylla HOM05D004172 ORTHO05D006010 8.8e-249 863.6 598 73.7
Cpa.g.sc0.76 Carica papaya HOM05D004172 ORTHO05D006010 4.4e-248 861.3 591 74.8
Dinv21399 Davidia involucrata HOM05D004172 ORTHO05D006010 4.4e-248 861.3 593 75.4
MELO3C025255.2 Cucumis melo HOM05D004172 ORTHO05D006010 7.5e-248 860.5 594 75.6
TPR.G24292 Trifolium pratense HOM05D004172 ORTHO05D006010 1.3e-247 859.8 593 75.0
Gohir.D02G002100 Gossypium hirsutum HOM05D004172 ORTHO05D006010 1.8e-246 855.9 594 75.8
CSS0013897 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 3.1e-246 855.1 591 74.8
Gorai.005G002600 Gossypium raimondii HOM05D004172 ORTHO05D006010 3.1e-246 855.1 594 75.8
Rhsim04G0120600 Rhododendron simsii HOM05D004172 ORTHO05D006010 6.6e-244 847.4 591 74.3
Peaxi162Scf00019g00011 Petunia axillaris HOM05D004172 ORTHO05D006010 1.1e-243 846.7 602 73.3
Phvul.010G059200 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 9.5e-243 843.6 588 74.1
Sabra04G0157100 Salix brachista HOM05D004172 ORTHO05D006010 1.2e-242 843.2 627 71.5
CiPaw.10G166300 Carya illinoinensis HOM05D004172 ORTHO05D006010 2.1e-242 842.4 566 76.9
PGSC0003DMG400006857 Solanum tuberosum HOM05D004172 ORTHO05D006010 4.7e-242 841.3 590 74.1
Nitab4.5_0000707g0290 Nicotiana tabacum HOM05D004172 ORTHO05D006010 2.3e-241 839.0 587 73.9
Sopen01g034500 Solanum pennellii HOM05D004172 ORTHO05D006010 3.0e-241 838.6 590 73.7
Lalb_Chr01g0023931 Lupinus albus HOM05D004172 ORTHO05D006010 5.2e-241 837.8 592 73.6
Nitab4.5_0006228g0020 Nicotiana tabacum HOM05D004172 ORTHO05D006010 1.5e-240 836.3 568 75.5
Solyc01g087530.3 Solanum lycopersicum HOM05D004172 ORTHO05D006010 2.0e-240 835.9 590 73.6
CAN.G219.48 Capsicum annuum HOM05D004172 ORTHO05D006010 1.1e-238 830.1 590 72.9
Haze_21203 Corylus avellana HOM05D004172 ORTHO05D006010 1.1e-238 830.1 695 64.9
Sc20g0007210 Simmondsia chinensis HOM05D004172 ORTHO05D006010 1.1e-238 830.1 593 73.2
SalBow6G2214 Salvia bowleyana HOM05D004172 ORTHO05D006010 1.8e-238 829.3 588 72.6
Nn5g26794 Nelumbo nucifera HOM05D004172 ORTHO05D006010 3.1e-238 828.6 568 75.7
VMungo0331G1250 Vigna mungo HOM05D004172 ORTHO05D006010 3.1e-238 828.6 588 73.3
Sabra06G0086400 Salix brachista HOM05D004172 ORTHO05D006010 3.5e-237 825.1 696 64.4
Lj7P587T8 Lonicera japonica HOM05D004172 ORTHO05D006010 4.5e-237 824.7 588 71.9
MSTRG.5032 Avicennia marina HOM05D004172 ORTHO05D006010 1.0e-236 823.5 591 71.6
Oeu006559.1 Olea europaea HOM05D004172 ORTHO05D006010 4.3e-235 818.1 612 70.8
TAR633G1329 Trochodendron aralioides HOM05D004172 ORTHO05D006010 2.8e-234 815.5 567 75.0
Aqoxy4G03306 Aquilegia oxysepala HOM05D004172 ORTHO05D006010 1.0e-233 813.5 592 72.0
Migut.N01780 Erythranthe guttata HOM05D004172 ORTHO05D006010 2.3e-233 812.4 589 72.0
GSVIVG01029868001 Vitis vinifera HOM05D004172 ORTHO05D006010 4.0e-233 811.6 509 80.6
MBI15_g31039_MAGBIO Magnolia biondii HOM05D004172 ORTHO05D006010 9.8e-232 807.0 594 72.2
DCAR_029461 Daucus carota HOM05D004172 ORTHO05D006010 7.0e-230 800.8 593 71.5
Actinidia20804 Actinidia chinensis HOM05D004172 ORTHO05D006010 6.0e-229 797.7 599 71.3
Hund03687 Selenicereus undatus HOM05D004172 ORTHO05D006010 5.6e-227 791.2 597 69.3
AUR62029801 Chenopodium quinoa HOM05D004172 ORTHO05D006010 9.5e-227 790.4 599 68.1
ECA248G2273 Erigeron canadensis HOM05D004172 ORTHO05D006010 3.6e-226 788.5 591 69.5
AUR62006448 Chenopodium quinoa HOM05D004172 ORTHO05D006010 4.7e-226 788.1 599 68.1
Ah.15g089820 Amaranthus hybridus HOM05D004172 ORTHO05D006010 8.0e-226 787.3 599 67.8
Oeu049006.1 Olea europaea HOM05D004172 ORTHO05D006010 1.8e-225 786.2 598 69.9
PSO017G1041 Papaver somniferum HOM05D004172 ORTHO05D006010 1.2e-224 783.5 591 70.6
PSO170G1455 Papaver somniferum HOM05D004172 ORTHO05D006010 2.2e-223 779.2 591 70.4
EL10Ac7g17137 Beta vulgaris HOM05D004172 ORTHO05D006010 4.9e-223 778.1 599 67.6
PSO502G0022 Papaver somniferum HOM05D004172 ORTHO05D006010 6.0e-221 771.2 591 69.9
Cc02_g28240 Coffea canephora HOM05D004172 ORTHO05D006010 1.3e-220 770.0 512 76.0
TAR636G0443 Trochodendron aralioides HOM05D004172 ORTHO05D006010 1.8e-217 759.6 592 68.8
SHI12946 Sapria himalayana HOM05D004172 ORTHO05D006010 5.2e-217 758.1 587 68.3
ATR1127G216 Amborella trichopoda HOM05D004172 ORTHO05D006010 7.1e-214 747.7 582 68.6
CDE09G1233 Ceratophyllum demersum HOM05D004172 ORTHO05D006010 4.3e-211 738.4 580 67.2
Os05g0316100 Oryza sativa ssp. japonica HOM05D004172 ORTHO05D006010 5.6e-211 738.0 586 67.1
HPP92_026424 Vanilla planifolia HOM05D004172 ORTHO05D006010 1.0e-204 717.2 590 64.2
Lsat_1_v5_gn_1_105840 Lactuca sativa HOM05D004172 ORTHO05D006010 9.0e-201 704.1 602 63.3
C03p44040 Brassica napus HOM05D004172 ORTHO05D006010 1.9e-198 696.4 382 94.0
Potri.016G140500 Populus trichocarpa HOM05D004172 ORTHO05D006010 1.0e-196 690.6 589 63.3
Zm00001eb408330 Zea mays HOM05D004172 ORTHO05D006010 7.3e-195 684.5 585 64.1
BraA01t04334Z Brassica rapa HOM05D004172 ORTHO05D006010 8.4e-191 671.0 372 93.3
unitig_747.g21293 Utricularia gibba HOM05D004172 ORTHO05D006010 2.2e-183 646.4 502 68.5
CDE08G0114 Ceratophyllum demersum HOM05D004172 ORTHO05D006010 4.3e-179 632.1 448 72.5
SEGI_23896 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 2.1e-173 613.2 479 67.4
HanXRQChr01g0016071 Helianthus annuus HOM05D004172 ORTHO05D006010 6.0e-173 611.7 434 74.0
vmacro08954 Vaccinium macrocarpon HOM05D004172 ORTHO05D006010 7.7e-168 594.7 508 65.2
SMO337G0001 Selaginella moellendorffii HOM05D004172 ORTHO05D006010 5.0e-167 592.0 547 60.7
Pp3c6_18720 Physcomitrium patens HOM05D004172 ORTHO05D006010 4.2e-142 509.2 584 49.1
CiPaw.09G223100 Carya illinoinensis HOM05D004172 ORTHO05D006010 9.4e-142 508.1 573 54.3
SGA_v2.0_scaffold5G02963 Striga asiatica HOM05D004172 ORTHO05D006010 1.3e-130 471.1 318 77.4
Actinidia32576 Actinidia chinensis HOM05D004172 ORTHO05D006010 2.5e-126 456.8 401 63.3
Mapoly0092s0078 Marchantia polymorpha HOM05D004172 ORTHO05D006010 2.2e-114 417.2 514 48.4
CSS0016172 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 3.7e-114 416.4 359 63.8
COL.COLO4_05675 Corchorus olitorius HOM05D004172 ORTHO05D006010 4.9e-114 416.0 252 83.3
BcaB04g18578 Brassica carinata HOM05D004172 ORTHO05D006010 9.2e-113 411.8 291 75.6
C03p44050 Brassica napus HOM05D004172 ORTHO05D006010 1.5e-102 377.9 210 92.9
CBR_g164 Chara braunii HOM05D004172 ORTHO05D006010 1.7e-98 364.4 566 42.6
Actinidia28546 Actinidia chinensis HOM05D004172 ORTHO05D006010 4.8e-85 319.7 229 73.4
SEGI_22351 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 1.1e-78 298.5 185 80.5
MCO09G526 Micromonas commoda HOM05D004172 ORTHO05D006010 1.2e-64 251.9 258 52.7
Cre06.g281900 Chlamydomonas reinhardtii HOM05D004172 ORTHO05D006010 6.9e-60 236.1 242 47.9
Medtr3g094870 Medicago truncatula HOM05D004172 ORTHO05D006010 7.2e-49 199.5 129 78.3
PRCOL_00003523 Prasinoderma coloniale HOM05D004172 ORTHO05D006010 1.8e-47 194.9 266 44.4
CSS0001306 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D000002 3.2e-41 174.1 129 68.2
HanXRQChr04g0127351 Helianthus annuus HOM05D004172 ORTHO05D006010 4.4e-30 137.1 137 56.9
BcaC02g10326 Brassica carinata HOM05D004172 ORTHO05D023965 3.7e-29 134.0 92 80.4
RcHm_v2.0_Chr3g0459981 Rosa chinensis HOM05D004172 ORTHO05D018193 2.2e-26 124.8 112 59.8
C04p30290 Brassica napus HOM05D004172 ORTHO05D023965 8.0e-24 116.3 70 88.6
BolC4t24562H Brassica oleracea HOM05D004172 ORTHO05D023965 8.0e-24 116.3 70 88.6
RcHm_v2.0_Chr3g0460031 Rosa chinensis HOM05D004172 ORTHO05D018193 5.2e-23 113.6 110 57.3
C01p21620 Brassica napus HOM05D004172 ORTHO05D023965 8.8e-23 112.8 70 85.7
QL07p004777 Quercus lobata HOM05D004172 ORTHO05D039478 2.6e-22 111.3 132 55.3
SEGI_04146 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 1.8e-20 105.1 206 40.8
Actinidia32575 Actinidia chinensis HOM05D004172 ORTHO05D006010 2.9e-18 97.8 50 86.0
C02p50100 Brassica napus HOM05D004172 ORTHO05D018193 3.8e-18 97.4 52 94.2
BolC2t11086H Brassica oleracea HOM05D004172 ORTHO05D018193 3.8e-18 97.4 52 94.2
BcaC09g50722 Brassica carinata HOM05D004172 ORTHO05D023965 4.2e-17 94.0 68 76.5
SEGI_20309 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 9.8e-14 82.8 71 62.0
HanXRQChr11g0335241 Helianthus annuus HOM05D004172 ORTHO05D006010 1.7e-13 82.0 52 82.7
BcaC07g38378 Brassica carinata HOM05D004172 ORTHO05D039478 8.3e-13 79.7 51 70.6
C03p65240 Brassica napus HOM05D004172 ORTHO05D018193 9.5e-09 66.2 30 100.0
BolC3t18777H Brassica oleracea HOM05D004172 ORTHO05D018193 9.5e-09 66.2 30 100.0
TAR633G1452 Trochodendron aralioides HOM05D004172 ORTHO05D414170 2.1e-08 65.1 57 56.1
Actinidia28545 Actinidia chinensis HOM05D004172 ORTHO05D018193 4.4e-06 57.4 74 50.0


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